RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 FXYD4P59646 89 aa9.78□□□□□ -0.84
DDX55-210ENST00000543016 CBX3Q13185 183 aa9.78□□□□□ -0.84
DDX55-210ENST00000543016 ZNF57Q68EA5 555 aaPredicted RBP9.78□□□□□ -0.84
DDX55-210ENST00000543016 PDPNQ86YL7 162 aa9.78□□□□□ -0.84
DDX55-210ENST00000543016 OR4C16Q8NGL9 310 aa9.78□□□□□ -0.84
DDX55-210ENST00000543016 OR56B4Q8NH76 319 aa9.78□□□□□ -0.84
DDX55-210ENST00000543016 ZFAND1Q8TCF1 268 aa9.78□□□□□ -0.84
DDX55-210ENST00000543016 SDHCQ99643 169 aaPredicted RBP9.78□□□□□ -0.84
DDX55-210ENST00000543016 ESM1Q9NQ30 184 aa9.78□□□□□ -0.84
DDX55-210ENST00000543016 C1RLQ9NZP8 487 aa9.78□□□□□ -0.84
DDX55-210ENST00000543016 PRELID3BQ9Y3B1 194 aa9.78□□□□□ -0.84
DDX55-210ENST00000543016 WASHC3Q9Y3C0 194 aa9.78□□□□□ -0.84
DDX55-210ENST00000543016 H0YJW9 148 aa9.77□□□□□ -0.85
DDX55-210ENST00000543016 GPR31O00270 319 aa9.77□□□□□ -0.85
DDX55-210ENST00000543016 OR2F2O95006 317 aa9.77□□□□□ -0.85
DDX55-210ENST00000543016 IGLV2-14P01704 120 aa9.77□□□□□ -0.85
DDX55-210ENST00000543016 CRYBA1P05813 215 aa9.77□□□□□ -0.85
DDX55-210ENST00000543016 SNRNP70P08621 437 aaKnown RBP9.77□□□□□ -0.85
DDX55-210ENST00000543016 ZNF735P0CB33 412 aa9.77□□□□□ -0.85
DDX55-210ENST00000543016 IL7P13232 177 aa9.77□□□□□ -0.85
DDX55-210ENST00000543016 GNRHRP30968 328 aa9.77□□□□□ -0.85
DDX55-210ENST00000543016 DUTP33316 252 aaKnown RBP9.77□□□□□ -0.85
DDX55-210ENST00000543016 KIR2DS2P43631 304 aa9.77□□□□□ -0.85
DDX55-210ENST00000543016 CATR1Q13166 79 aa9.77□□□□□ -0.85
DDX55-210ENST00000543016 HES1Q14469 280 aa9.77□□□□□ -0.85
DDX55-210ENST00000543016 BAK1Q16611 211 aa9.77□□□□□ -0.85
DDX55-210ENST00000543016 RTL8BQ17RB0 113 aa9.77□□□□□ -0.85
DDX55-210ENST00000543016 AADACL3Q5VUY0 350 aa9.77□□□□□ -0.85
DDX55-210ENST00000543016 DHRS7BQ6IAN0 325 aaPredicted RBP9.77□□□□□ -0.85
DDX55-210ENST00000543016 TCTEX1D1Q8N7M0 179 aa9.77□□□□□ -0.85
DDX55-210ENST00000543016 CD300LFQ8TDQ1 290 aa9.77□□□□□ -0.85
DDX55-210ENST00000543016 RBM14Q96PK6 669 aaKnown RBP9.77□□□□□ -0.85
DDX55-210ENST00000543016 RSRP1Q9BUV0 290 aa9.77□□□□□ -0.85
DDX55-210ENST00000543016 CHIAQ9BZP6 476 aa9.77□□□□□ -0.85
DDX55-210ENST00000543016 HRASLSQ9HDD0 168 aa9.77□□□□□ -0.85
DDX55-210ENST00000543016 CCL28Q9NRJ3 127 aa9.77□□□□□ -0.85
DDX55-210ENST00000543016 MCUBQ9NWR8 336 aa9.77□□□□□ -0.85
DDX55-210ENST00000543016 NIPBLQ6KC79 2804 aaeCLIP9.76□□□□□ -0.85
DDX55-210ENST00000543016 J3QRK9 145 aa9.76□□□□□ -0.85
DDX55-210ENST00000543016 GPR137BO60478 399 aa9.76□□□□□ -0.85
DDX55-210ENST00000543016 IGKV1D-33P01593 117 aa9.76□□□□□ -0.85
DDX55-210ENST00000543016 IGKV1-33P01594 117 aa9.76□□□□□ -0.85
DDX55-210ENST00000543016 TMEM11P17152 192 aa9.76□□□□□ -0.85
DDX55-210ENST00000543016 LGALS7P47929 136 aa9.76□□□□□ -0.85
DDX55-210ENST00000543016 EIF4EBP1Q13541 118 aaPredicted RBP9.76□□□□□ -0.85
DDX55-210ENST00000543016 SCGB2B2Q4G0G5 96 aa9.76□□□□□ -0.85
DDX55-210ENST00000543016 IDO2Q6ZQW0 420 aa9.76□□□□□ -0.85
DDX55-210ENST00000543016 Q8N6K4 173 aa9.76□□□□□ -0.85
DDX55-210ENST00000543016 ZNF383Q8NA42 475 aa9.76□□□□□ -0.85
DDX55-210ENST00000543016 POC5Q8NA72 575 aa9.76□□□□□ -0.85
DDX55-210ENST00000543016 OR4D10Q8NGI6 311 aa9.76□□□□□ -0.85
DDX55-210ENST00000543016 OR4C13Q8NGP0 309 aa9.76□□□□□ -0.85
DDX55-210ENST00000543016 EAF1Q96JC9 268 aaPredicted RBP9.76□□□□□ -0.85
DDX55-210ENST00000543016 SLC25A21Q9BQT8 299 aaPredicted RBP9.76□□□□□ -0.85
DDX55-210ENST00000543016 AIFM2Q9BRQ8 373 aa9.76□□□□□ -0.85
DDX55-210ENST00000543016 NPFFR1Q9GZQ6 430 aa9.76□□□□□ -0.85
DDX55-210ENST00000543016 FXYD6Q9H0Q3 95 aa9.76□□□□□ -0.85
DDX55-210ENST00000543016 RANBP3Q9H6Z4 567 aaPredicted RBP9.76□□□□□ -0.85
DDX55-210ENST00000543016 FAM212BQ9NTI7 297 aaPredicted RBP9.76□□□□□ -0.85
DDX55-210ENST00000543016 H7C2Y5 167 aa9.75□□□□□ -0.85
DDX55-210ENST00000543016 RBFOX2O43251 390 aaKnown RBP eCLIP9.75□□□□□ -0.85
DDX55-210ENST00000543016 FGF16O43320 207 aa9.75□□□□□ -0.85
DDX55-210ENST00000543016 B3GALNT1O75752 331 aa9.75□□□□□ -0.85
DDX55-210ENST00000543016 PGAM2P15259 253 aa9.75□□□□□ -0.85
DDX55-210ENST00000543016 PAX6P26367 422 aa9.75□□□□□ -0.85
DDX55-210ENST00000543016 RND3P61587 244 aa9.75□□□□□ -0.85
DDX55-210ENST00000543016 LY6EQ16553 131 aa9.75□□□□□ -0.85
DDX55-210ENST00000543016 ABCA11PQ4W5N1 156 aa9.75□□□□□ -0.85
DDX55-210ENST00000543016 ZNF818PQ6ZRF7 136 aa9.75□□□□□ -0.85
DDX55-210ENST00000543016 KCTD9Q7L273 389 aa9.75□□□□□ -0.85
DDX55-210ENST00000543016 PRIMA1Q86XR5 153 aa9.75□□□□□ -0.85
DDX55-210ENST00000543016 CCDC71LQ8N9Z2 235 aa9.75□□□□□ -0.85
DDX55-210ENST00000543016 OR51S1Q8NGJ8 323 aa9.75□□□□□ -0.85
DDX55-210ENST00000543016 DDB2Q92466 427 aa9.75□□□□□ -0.85
DDX55-210ENST00000543016 FLYWCH2Q96CP2 140 aaKnown RBP9.75□□□□□ -0.85
DDX55-210ENST00000543016 TSNAXQ99598 290 aaKnown RBP9.75□□□□□ -0.85
DDX55-210ENST00000543016 SLC25A33Q9BSK2 321 aa9.75□□□□□ -0.85
DDX55-210ENST00000543016 SLC35D1Q9NTN3 355 aa9.75□□□□□ -0.85
DDX55-210ENST00000543016 MOB4Q9Y3A3 225 aa9.75□□□□□ -0.85
DDX55-210ENST00000543016 IGHV3-72A0A0B4J1Y9 119 aa9.74□□□□□ -0.85
DDX55-210ENST00000543016 PGLYRP1O75594 196 aaPredicted RBP9.74□□□□□ -0.85
DDX55-210ENST00000543016 SPDEFO95238 335 aa9.74□□□□□ -0.85
DDX55-210ENST00000543016 CTSDP07339 412 aaPredicted RBP9.74□□□□□ -0.85
DDX55-210ENST00000543016 TMEM177Q53S58 311 aa9.74□□□□□ -0.85
DDX55-210ENST00000543016 C11orf88Q6PI97 169 aa9.74□□□□□ -0.85
DDX55-210ENST00000543016 CCBE1Q6UXH8 406 aaPredicted RBP9.74□□□□□ -0.85
DDX55-210ENST00000543016 DRAXINQ8NBI3 349 aaPredicted RBP9.74□□□□□ -0.85
DDX55-210ENST00000543016 NPBQ8NG41 125 aa9.74□□□□□ -0.85
DDX55-210ENST00000543016 OR4S2Q8NH73 311 aa9.74□□□□□ -0.85
DDX55-210ENST00000543016 OSR1Q8TAX0 266 aaPredicted RBP9.74□□□□□ -0.85
DDX55-210ENST00000543016 TCTEX1D2Q8WW35 142 aa9.74□□□□□ -0.85
DDX55-210ENST00000543016 C5orf30Q96GV9 206 aa9.74□□□□□ -0.85
DDX55-210ENST00000543016 C14orf166Q9Y224 244 aaKnown RBP9.74□□□□□ -0.85
DDX55-210ENST00000543016 A0A1B0GUS0 222 aa9.73□□□□□ -0.85
DDX55-210ENST00000543016 FAM181BA6NEQ2 426 aa9.73□□□□□ -0.85
DDX55-210ENST00000543016 LINC00473A8K010 186 aa9.73□□□□□ -0.85
DDX55-210ENST00000543016 UPK1BO75841 260 aa9.73□□□□□ -0.85
DDX55-210ENST00000543016 NDUFA7O95182 113 aa9.73□□□□□ -0.85
DDX55-210ENST00000543016 CD24P25063 80 aa9.73□□□□□ -0.85
DDX55-210ENST00000543016 FAAP20Q6NZ36 180 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms