RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 ZNF562Q6V9R5 426 aa13.61□□□□□ -0.23
LTBR-210ENST00000542830 ZNF491Q8N8L2 437 aa13.61□□□□□ -0.23
LTBR-210ENST00000542830 ABHD5Q8WTS1 349 aa13.61□□□□□ -0.23
LTBR-210ENST00000542830 MAFIPQ8WZ33 124 aa13.61□□□□□ -0.23
LTBR-210ENST00000542830 FLYWCH2Q96CP2 140 aaKnown RBP13.61□□□□□ -0.23
LTBR-210ENST00000542830 OR51E2Q9H255 320 aa13.61□□□□□ -0.23
LTBR-210ENST00000542830 KLK15Q9H2R5 256 aa13.61□□□□□ -0.23
LTBR-210ENST00000542830 SLC35D1Q9NTN3 355 aa13.61□□□□□ -0.23
LTBR-210ENST00000542830 SDHAF2Q9NX18 166 aa13.61□□□□□ -0.23
LTBR-210ENST00000542830 FOXA2Q9Y261 457 aaPredicted RBP13.61□□□□□ -0.23
LTBR-210ENST00000542830 RRP15Q9Y3B9 282 aaKnown RBP13.61□□□□□ -0.23
LTBR-210ENST00000542830 RBM7Q9Y580 266 aaKnown RBP13.61□□□□□ -0.23
LTBR-210ENST00000542830 A0A1W2PN81 502 aa13.6□□□□□ -0.23
LTBR-210ENST00000542830 FCN1O00602 326 aa13.6□□□□□ -0.23
LTBR-210ENST00000542830 SDC2P34741 201 aa13.6□□□□□ -0.23
LTBR-210ENST00000542830 CHRNA7P36544 502 aa13.6□□□□□ -0.23
LTBR-210ENST00000542830 SCAND1P57086 179 aa13.6□□□□□ -0.23
LTBR-210ENST00000542830 PITPNAQ00169 270 aa13.6□□□□□ -0.23
LTBR-210ENST00000542830 RUNX1Q01196 453 aa13.6□□□□□ -0.23
LTBR-210ENST00000542830 CBX3Q13185 183 aa13.6□□□□□ -0.23
LTBR-210ENST00000542830 FHL3Q13643 280 aa13.6□□□□□ -0.23
LTBR-210ENST00000542830 KIAA0141Q14154 515 aaPredicted RBP13.6□□□□□ -0.23
LTBR-210ENST00000542830 C19orf54Q5BKX5 351 aa13.6□□□□□ -0.23
LTBR-210ENST00000542830 HACD4Q5VWC8 232 aa13.6□□□□□ -0.23
LTBR-210ENST00000542830 PYHIN1Q6K0P9 492 aa13.6□□□□□ -0.23
LTBR-210ENST00000542830 OR11H1Q8NG94 326 aa13.6□□□□□ -0.23
LTBR-210ENST00000542830 DCSTAMPQ9H295 470 aa13.6□□□□□ -0.23
LTBR-210ENST00000542830 FBXO7Q9Y3I1 522 aa13.6□□□□□ -0.23
LTBR-210ENST00000542830 NUBP2Q9Y5Y2 271 aa13.6□□□□□ -0.23
LTBR-210ENST00000542830 K7EIL1 84 aa13.59□□□□□ -0.23
LTBR-210ENST00000542830 CTXN2P0C2S0 81 aa13.59□□□□□ -0.23
LTBR-210ENST00000542830 OR8U8P0C7N1 319 aa13.59□□□□□ -0.23
LTBR-210ENST00000542830 LGALS7P47929 136 aa13.59□□□□□ -0.23
LTBR-210ENST00000542830 AKIRIN2Q53H80 203 aa13.59□□□□□ -0.23
LTBR-210ENST00000542830 C9orf66Q5T8R8 295 aa13.59□□□□□ -0.23
LTBR-210ENST00000542830 LGALS14Q8TCE9 139 aa13.59□□□□□ -0.23
LTBR-210ENST00000542830 ADTRPQ96IZ2 230 aa13.59□□□□□ -0.23
LTBR-210ENST00000542830 CLCC1Q96S66 551 aa13.59□□□□□ -0.23
LTBR-210ENST00000542830 GNB4Q9HAV0 340 aa13.59□□□□□ -0.23
LTBR-210ENST00000542830 A3GALT2U3KPV4 340 aa13.59□□□□□ -0.23
LTBR-210ENST00000542830 LOC100506127A0A0U1RQW1 187 aa13.58□□□□□ -0.24
LTBR-210ENST00000542830 I3L521 148 aa13.58□□□□□ -0.24
LTBR-210ENST00000542830 CA2P00918 260 aa13.58□□□□□ -0.24
LTBR-210ENST00000542830 RRASP10301 218 aa13.58□□□□□ -0.24
LTBR-210ENST00000542830 SNRPBP14678 240 aaKnown RBP13.58□□□□□ -0.24
LTBR-210ENST00000542830 CD36P16671 472 aa13.58□□□□□ -0.24
LTBR-210ENST00000542830 CD40LGP29965 261 aa13.58□□□□□ -0.24
LTBR-210ENST00000542830 LINC00205P59089 165 aa13.58□□□□□ -0.24
LTBR-210ENST00000542830 GNG2P59768 71 aa13.58□□□□□ -0.24
LTBR-210ENST00000542830 DCTN2Q13561 401 aaKnown RBP13.58□□□□□ -0.24
LTBR-210ENST00000542830 NEDD8Q15843 81 aa13.58□□□□□ -0.24
LTBR-210ENST00000542830 RTL8BQ17RB0 113 aa13.58□□□□□ -0.24
LTBR-210ENST00000542830 ACTBL2Q562R1 376 aa13.58□□□□□ -0.24
LTBR-210ENST00000542830 PPP1R27Q86WC6 154 aa13.58□□□□□ -0.24
LTBR-210ENST00000542830 H1FOOQ8IZA3 346 aaPredicted RBP13.58□□□□□ -0.24
LTBR-210ENST00000542830 OR1N2Q8NGR9 330 aa13.58□□□□□ -0.24
LTBR-210ENST00000542830 ETV7Q9Y603 341 aa13.58□□□□□ -0.24
LTBR-210ENST00000542830 WI2-2373I1.2A0A1W2PRP0 233 aa13.57□□□□□ -0.24
LTBR-210ENST00000542830 SLC25A17O43808 307 aa13.57□□□□□ -0.24
LTBR-210ENST00000542830 RAMP3O60896 148 aa13.57□□□□□ -0.24
LTBR-210ENST00000542830 TMEM127O75204 238 aa13.57□□□□□ -0.24
LTBR-210ENST00000542830 EGR2P11161 476 aaPredicted RBP13.57□□□□□ -0.24
LTBR-210ENST00000542830 DGCR2P98153 550 aa13.57□□□□□ -0.24
LTBR-210ENST00000542830 ZNF616Q08AN1 781 aa13.57□□□□□ -0.24
LTBR-210ENST00000542830 ZNF260Q3ZCT1 412 aa13.57□□□□□ -0.24
LTBR-210ENST00000542830 UNQ5815/PRO19632Q6UWF5 114 aa13.57□□□□□ -0.24
LTBR-210ENST00000542830 ARPC1AQ92747 370 aa13.57□□□□□ -0.24
LTBR-210ENST00000542830 ST6GALNAC5Q9BVH7 336 aa13.57□□□□□ -0.24
LTBR-210ENST00000542830 RHBDL2Q9NX52 303 aa13.57□□□□□ -0.24
LTBR-210ENST00000542830 ELF5Q9UKW6 265 aaPredicted RBP13.57□□□□□ -0.24
LTBR-210ENST00000542830 IGKV1D-8A0A087WSZ0 117 aa13.56□□□□□ -0.24
LTBR-210ENST00000542830 TMEM235A6NFC5 223 aa13.56□□□□□ -0.24
LTBR-210ENST00000542830 SEC14L6B5MCN3 397 aa13.56□□□□□ -0.24
LTBR-210ENST00000542830 SOX15O60248 233 aa13.56□□□□□ -0.24
LTBR-210ENST00000542830 MXD1Q05195 221 aa13.56□□□□□ -0.24
LTBR-210ENST00000542830 FXYD3Q14802 87 aa13.56□□□□□ -0.24
LTBR-210ENST00000542830 TIMM50Q3ZCQ8 353 aa13.56□□□□□ -0.24
LTBR-210ENST00000542830 DEFB121Q5J5C9 76 aa13.56□□□□□ -0.24
LTBR-210ENST00000542830 LFNGQ8NES3 379 aa13.56□□□□□ -0.24
LTBR-210ENST00000542830 HARBI1Q96MB7 349 aa13.56□□□□□ -0.24
LTBR-210ENST00000542830 FAM103A1Q9BTL3 118 aaKnown RBP13.56□□□□□ -0.24
LTBR-210ENST00000542830 SLA2Q9H6Q3 261 aa13.56□□□□□ -0.24
LTBR-210ENST00000542830 A0A0A6YYH2 397 aa13.55□□□□□ -0.24
LTBR-210ENST00000542830 A6NJ64 397 aa13.55□□□□□ -0.24
LTBR-210ENST00000542830 SHOXO15266 292 aa13.55□□□□□ -0.24
LTBR-210ENST00000542830 SLC22A5O76082 557 aa13.55□□□□□ -0.24
LTBR-210ENST00000542830 IGLV2-23P01705 113 aa13.55□□□□□ -0.24
LTBR-210ENST00000542830 GNB1P62873 340 aa13.55□□□□□ -0.24
LTBR-210ENST00000542830 TMEM177Q53S58 311 aa13.55□□□□□ -0.24
LTBR-210ENST00000542830 IDNKQ5T6J7 187 aa13.55□□□□□ -0.24
LTBR-210ENST00000542830 CNIH2Q6PI25 160 aa13.55□□□□□ -0.24
LTBR-210ENST00000542830 BVESQ8NE79 360 aa13.55□□□□□ -0.24
LTBR-210ENST00000542830 NUDCD2Q8WVJ2 157 aa13.55□□□□□ -0.24
LTBR-210ENST00000542830 C5orf30Q96GV9 206 aa13.55□□□□□ -0.24
LTBR-210ENST00000542830 OR5B12Q96R08 314 aa13.55□□□□□ -0.24
LTBR-210ENST00000542830 RNF167Q9H6Y7 350 aa13.55□□□□□ -0.24
LTBR-210ENST00000542830 VCX3AQ9NNX9 186 aa13.55□□□□□ -0.24
LTBR-210ENST00000542830 TPSG1Q9NRR2 321 aa13.55□□□□□ -0.24
LTBR-210ENST00000542830 CNIH1O95406 144 aa13.54□□□□□ -0.24
LTBR-210ENST00000542830 CRYGBP07316 175 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms