RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 C1QL1O75973 258 aa14.2□□□□□ -0.14
TMEM50B-210ENST00000542230 JTBO76095 146 aa14.2□□□□□ -0.14
TMEM50B-210ENST00000542230 FHITP49789 147 aa14.2□□□□□ -0.14
TMEM50B-210ENST00000542230 DYNLT3P51808 116 aa14.2□□□□□ -0.14
TMEM50B-210ENST00000542230 RPL31P62899 125 aaKnown RBP14.2□□□□□ -0.14
TMEM50B-210ENST00000542230 TMEM200BQ69YZ2 307 aa14.2□□□□□ -0.14
TMEM50B-210ENST00000542230 SSX9Q7RTT3 188 aa14.2□□□□□ -0.14
TMEM50B-210ENST00000542230 OR5C1Q8NGR4 320 aa14.2□□□□□ -0.14
TMEM50B-210ENST00000542230 H1FXQ92522 213 aaKnown RBP14.2□□□□□ -0.14
TMEM50B-210ENST00000542230 MED9Q9NWA0 146 aa14.2□□□□□ -0.14
TMEM50B-210ENST00000542230 SAA2-SAA4A0A096LPE2 208 aa14.19□□□□□ -0.14
TMEM50B-210ENST00000542230 ZNF705EA8MWA4 302 aaPredicted RBP14.19□□□□□ -0.14
TMEM50B-210ENST00000542230 GAPDHP04406 335 aaKnown RBP14.19□□□□□ -0.14
TMEM50B-210ENST00000542230 FGF2P09038 288 aa14.19□□□□□ -0.14
TMEM50B-210ENST00000542230 SAA2P0DJI9 122 aaPredicted RBP14.19□□□□□ -0.14
TMEM50B-210ENST00000542230 PVALBP20472 110 aaPredicted RBP14.19□□□□□ -0.14
TMEM50B-210ENST00000542230 AKR1C1Q04828 323 aa14.19□□□□□ -0.14
TMEM50B-210ENST00000542230 CATR1Q13166 79 aa14.19□□□□□ -0.14
TMEM50B-210ENST00000542230 C1orf87Q8N0U7 546 aa14.19□□□□□ -0.14
TMEM50B-210ENST00000542230 STPG2Q8N412 459 aa14.19□□□□□ -0.14
TMEM50B-210ENST00000542230 UBAC2Q8NBM4 344 aa14.19□□□□□ -0.14
TMEM50B-210ENST00000542230 MMP24Q9Y5R2 645 aa14.19□□□□□ -0.14
TMEM50B-210ENST00000542230 CRYBG3Q68DQ2 2970 aa14.19□□□□□ -0.14
TMEM50B-210ENST00000542230 NKX6-3A6NJ46 265 aa14.19□□□□□ -0.14
TMEM50B-210ENST00000542230 DVL1O14640 695 aa14.19□□□□□ -0.14
TMEM50B-210ENST00000542230 SLC25A6P12236 298 aa14.19□□□□□ -0.14
TMEM50B-210ENST00000542230 SRSF3P84103 164 aaKnown RBP14.19□□□□□ -0.14
TMEM50B-210ENST00000542230 HSD17B10Q99714 261 aaKnown RBP14.19□□□□□ -0.14
TMEM50B-210ENST00000542230 ARHGAP32A7KAX9 2087 aa14.19□□□□□ -0.14
TMEM50B-210ENST00000542230 TXNL1O43396 289 aa14.18□□□□□ -0.14
TMEM50B-210ENST00000542230 SYNGR2O43760 224 aa14.18□□□□□ -0.14
TMEM50B-210ENST00000542230 SFTPCP11686 197 aa14.18□□□□□ -0.14
TMEM50B-210ENST00000542230 DLX1P56177 255 aa14.18□□□□□ -0.14
TMEM50B-210ENST00000542230 PRB3Q04118 309 aaPredicted RBP14.18□□□□□ -0.14
TMEM50B-210ENST00000542230 ARL16Q0P5N6 197 aa14.18□□□□□ -0.14
TMEM50B-210ENST00000542230 MIDNQ504T8 468 aa14.18□□□□□ -0.14
TMEM50B-210ENST00000542230 ZNF66Q6ZN08 573 aa14.18□□□□□ -0.14
TMEM50B-210ENST00000542230 LYG1Q8N1E2 194 aa14.18□□□□□ -0.14
TMEM50B-210ENST00000542230 ZNF439Q8NDP4 499 aa14.18□□□□□ -0.14
TMEM50B-210ENST00000542230 RNF141Q8WVD5 230 aa14.18□□□□□ -0.14
TMEM50B-210ENST00000542230 ZNF251Q9BRH9 671 aa14.18□□□□□ -0.14
TMEM50B-210ENST00000542230 TMEM204Q9BSN7 226 aa14.18□□□□□ -0.14
TMEM50B-210ENST00000542230 ARV1Q9H2C2 271 aa14.18□□□□□ -0.14
TMEM50B-210ENST00000542230 NCOR1P1Q9H4R4 102 aa14.18□□□□□ -0.14
TMEM50B-210ENST00000542230 IDI2-AS1Q9NZ38 188 aa14.18□□□□□ -0.14
TMEM50B-210ENST00000542230 TNCP24821 2201 aa14.18□□□□□ -0.14
TMEM50B-210ENST00000542230 A8MXK9 166 aa14.18□□□□□ -0.14
TMEM50B-210ENST00000542230 TAS2R3Q9NYW6 316 aa14.18□□□□□ -0.14
TMEM50B-210ENST00000542230 LPAR3Q9UBY5 353 aa14.18□□□□□ -0.14
TMEM50B-210ENST00000542230 MARCH11A6NNE9 402 aa14.17□□□□□ -0.14
TMEM50B-210ENST00000542230 SOD3P08294 240 aa14.17□□□□□ -0.14
TMEM50B-210ENST00000542230 RPS16P62249 146 aaKnown RBP14.17□□□□□ -0.14
TMEM50B-210ENST00000542230 TAGLNQ01995 201 aaKnown RBP14.17□□□□□ -0.14
TMEM50B-210ENST00000542230 CORO2AQ92828 525 aa14.17□□□□□ -0.14
TMEM50B-210ENST00000542230 ZDHHC16Q969W1 377 aa14.17□□□□□ -0.14
TMEM50B-210ENST00000542230 hADV38S2A0JD32 116 aa14.17□□□□□ -0.14
TMEM50B-210ENST00000542230 ZNF729A6NN14 1252 aaPredicted RBP14.17□□□□□ -0.14
TMEM50B-210ENST00000542230 MED6O75586 246 aa14.17□□□□□ -0.14
TMEM50B-210ENST00000542230 METTL15P1P0C7V9 234 aa14.17□□□□□ -0.14
TMEM50B-210ENST00000542230 AVPI1Q5T686 147 aa14.17□□□□□ -0.14
TMEM50B-210ENST00000542230 HAPLN4Q86UW8 402 aa14.17□□□□□ -0.14
TMEM50B-210ENST00000542230 HRH4Q9H3N8 390 aa14.17□□□□□ -0.14
TMEM50B-210ENST00000542230 RBKSQ9H477 322 aa14.17□□□□□ -0.14
TMEM50B-210ENST00000542230 LINC00574Q9H8X3 128 aa14.17□□□□□ -0.14
TMEM50B-210ENST00000542230 RPUSD1Q9UJJ7 312 aaKnown RBP14.17□□□□□ -0.14
TMEM50B-210ENST00000542230 LINC00312Q9Y6C7 94 aa14.17□□□□□ -0.14
TMEM50B-210ENST00000542230 TRAV3A0A0B4J244 114 aa14.16□□□□□ -0.14
TMEM50B-210ENST00000542230 C19orf84I3L1E1 186 aa14.16□□□□□ -0.14
TMEM50B-210ENST00000542230 OR9G9P0C7N8 305 aa14.16□□□□□ -0.14
TMEM50B-210ENST00000542230 OR2B8PP59922 312 aa14.16□□□□□ -0.14
TMEM50B-210ENST00000542230 UBE2KP61086 200 aa14.16□□□□□ -0.14
TMEM50B-210ENST00000542230 RUNX1Q01196 453 aa14.16□□□□□ -0.14
TMEM50B-210ENST00000542230 MSMO1Q15800 293 aa14.16□□□□□ -0.14
TMEM50B-210ENST00000542230 TUSC1Q2TAM9 212 aa14.16□□□□□ -0.14
TMEM50B-210ENST00000542230 PXDC1Q5TGL8 231 aa14.16□□□□□ -0.14
TMEM50B-210ENST00000542230 ARHGDIBP52566 201 aa14.16□□□□□ -0.14
TMEM50B-210ENST00000542230 TNFRSF9Q07011 255 aa14.16□□□□□ -0.14
TMEM50B-210ENST00000542230 HFEQ30201 348 aa14.16□□□□□ -0.14
TMEM50B-210ENST00000542230 R3HDM4Q96D70 268 aa14.16□□□□□ -0.14
TMEM50B-210ENST00000542230 GINS3Q9BRX5 216 aa14.16□□□□□ -0.14
TMEM50B-210ENST00000542230 PSENENQ9NZ42 101 aa14.16□□□□□ -0.14
TMEM50B-210ENST00000542230 TOR1AO14656 332 aa14.15□□□□□ -0.14
TMEM50B-210ENST00000542230 NDUFB3O43676 98 aa14.15□□□□□ -0.14
TMEM50B-210ENST00000542230 F12P00748 615 aaPredicted RBP14.15□□□□□ -0.14
TMEM50B-210ENST00000542230 SPANXN5Q5MJ07 72 aa14.15□□□□□ -0.14
TMEM50B-210ENST00000542230 H2BFWTQ7Z2G1 175 aa14.15□□□□□ -0.14
TMEM50B-210ENST00000542230 HSD17B13Q7Z5P4 300 aaPredicted RBP14.15□□□□□ -0.14
TMEM50B-210ENST00000542230 ZNF383Q8NA42 475 aa14.15□□□□□ -0.14
TMEM50B-210ENST00000542230 ITLN2Q8WWU7 325 aaPredicted RBP14.15□□□□□ -0.14
TMEM50B-210ENST00000542230 DDB2Q92466 427 aa14.15□□□□□ -0.14
TMEM50B-210ENST00000542230 ZNF462Q96JM2 2506 aa14.15□□□□□ -0.14
TMEM50B-210ENST00000542230 AGPAT2O15120 278 aa14.15□□□□□ -0.14
TMEM50B-210ENST00000542230 SPP1P10451 314 aa14.15□□□□□ -0.14
TMEM50B-210ENST00000542230 PLA2G5P39877 138 aa14.15□□□□□ -0.14
TMEM50B-210ENST00000542230 SULT1A2P50226 295 aa14.15□□□□□ -0.14
TMEM50B-210ENST00000542230 MRPS11P82912 194 aaKnown RBP14.15□□□□□ -0.14
TMEM50B-210ENST00000542230 TET2Q6N021 2002 aaPredicted RBP14.15□□□□□ -0.14
TMEM50B-210ENST00000542230 SLC25A31Q9H0C2 315 aa14.15□□□□□ -0.14
TMEM50B-210ENST00000542230 SPG11Q96JI7 2443 aa14.14□□□□□ -0.15
TMEM50B-210ENST00000542230 BORCS7-ASMTA0A0B4J1R7 106 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms