RNA–Protein interactions for RNA: ENST00000542133.5

NPIPB4-215, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 3

Gene NPIPB4, Length 910 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-215	ENST00000542133	TCTE3	Q8IZS6	198 aa		6.24	□□□□□ -1.41
NPIPB4-215	ENST00000542133	OR4C13	Q8NGP0	309 aa		6.24	□□□□□ -1.41
NPIPB4-215	ENST00000542133	OR13G1	Q8NGZ3	307 aa		6.24	□□□□□ -1.41
NPIPB4-215	ENST00000542133	OR5K1	Q8NHB7	308 aa		6.24	□□□□□ -1.41
NPIPB4-215	ENST00000542133	OR2T6	Q8NHC8	308 aa		6.24	□□□□□ -1.41
NPIPB4-215	ENST00000542133	TWIST2	Q8WVJ9	160 aa		6.24	□□□□□ -1.41
NPIPB4-215	ENST00000542133	SEH1L	Q96EE3	360 aa		6.24	□□□□□ -1.41
NPIPB4-215	ENST00000542133	CENPN	Q96H22	339 aa	Predicted RBP	6.24	□□□□□ -1.41
NPIPB4-215	ENST00000542133	CNBD2	Q96M20	576 aa		6.24	□□□□□ -1.41
NPIPB4-215	ENST00000542133	MRPL18	Q9H0U6	180 aa	Known RBP	6.24	□□□□□ -1.41
NPIPB4-215	ENST00000542133	SPANXC	Q9NY87	97 aa		6.24	□□□□□ -1.41
NPIPB4-215	ENST00000542133	MARCO	Q9UEW3	520 aa	Predicted RBP	6.24	□□□□□ -1.41
NPIPB4-215	ENST00000542133	PSORS1C1	Q9UIG5	152 aa		6.24	□□□□□ -1.41
NPIPB4-215	ENST00000542133	PSG8	Q9UQ74	426 aa		6.24	□□□□□ -1.41
NPIPB4-215	ENST00000542133	FAM96B	Q9Y3D0	163 aa		6.24	□□□□□ -1.41
NPIPB4-215	ENST00000542133	CHST2	Q9Y4C5	530 aa		6.24	□□□□□ -1.41
NPIPB4-215	ENST00000542133	ALMS1	Q8TCU4	4167 aa		6.24	□□□□□ -1.41
NPIPB4-215	ENST00000542133	C1orf196	B1AJZ1	125 aa		6.23	□□□□□ -1.41
NPIPB4-215	ENST00000542133		M0QYG6	137 aa		6.23	□□□□□ -1.41
NPIPB4-215	ENST00000542133	ACOT8	O14734	319 aa		6.23	□□□□□ -1.41
NPIPB4-215	ENST00000542133	TOMM40	O96008	361 aa		6.23	□□□□□ -1.41
NPIPB4-215	ENST00000542133	PAX9	P55771	341 aa		6.23	□□□□□ -1.41
NPIPB4-215	ENST00000542133	TMEM50B	P56557	158 aa		6.23	□□□□□ -1.41
NPIPB4-215	ENST00000542133	BAX	Q07812	192 aa		6.23	□□□□□ -1.41
NPIPB4-215	ENST00000542133	PSG7	Q13046	419 aa		6.23	□□□□□ -1.41
NPIPB4-215	ENST00000542133	RSU1	Q15404	277 aa		6.23	□□□□□ -1.41
NPIPB4-215	ENST00000542133	OR1Q1	Q15612	314 aa		6.23	□□□□□ -1.41
NPIPB4-215	ENST00000542133	TMEM97	Q5BJF2	176 aa		6.23	□□□□□ -1.41
NPIPB4-215	ENST00000542133	LY6G6F	Q5SQ64	297 aa		6.23	□□□□□ -1.41
NPIPB4-215	ENST00000542133	FAM201A	Q5SY85	155 aa		6.23	□□□□□ -1.41
NPIPB4-215	ENST00000542133	GLYAT	Q6IB77	296 aa		6.23	□□□□□ -1.41
NPIPB4-215	ENST00000542133	GSG1L	Q6UXU4	331 aa		6.23	□□□□□ -1.41
NPIPB4-215	ENST00000542133	RNF144B	Q7Z419	303 aa		6.23	□□□□□ -1.41
NPIPB4-215	ENST00000542133	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	6.23	□□□□□ -1.41
NPIPB4-215	ENST00000542133	CALHM3	Q86XJ0	350 aa		6.23	□□□□□ -1.41
NPIPB4-215	ENST00000542133		Q8N1Y9	231 aa		6.23	□□□□□ -1.41
NPIPB4-215	ENST00000542133	OR52P1P	Q8NH57	321 aa		6.23	□□□□□ -1.41
NPIPB4-215	ENST00000542133	OR56B4	Q8NH76	319 aa		6.23	□□□□□ -1.41
NPIPB4-215	ENST00000542133	OR1F12	Q8NHA8	337 aa		6.23	□□□□□ -1.41
NPIPB4-215	ENST00000542133		Q8WTZ3	238 aa		6.23	□□□□□ -1.41
NPIPB4-215	ENST00000542133	RNF141	Q8WVD5	230 aa		6.23	□□□□□ -1.41
NPIPB4-215	ENST00000542133	DEDD2	Q8WXF8	326 aa		6.23	□□□□□ -1.41
NPIPB4-215	ENST00000542133	BAALC	Q8WXS3	180 aa		6.23	□□□□□ -1.41
NPIPB4-215	ENST00000542133	OR52E6	Q96RD3	313 aa		6.23	□□□□□ -1.41
NPIPB4-215	ENST00000542133	C20orf144	Q9BQM9	153 aa		6.23	□□□□□ -1.41
NPIPB4-215	ENST00000542133	HCAR1	Q9BXC0	346 aa		6.23	□□□□□ -1.41
NPIPB4-215	ENST00000542133	ISYNA1	Q9NPH2	558 aa		6.23	□□□□□ -1.41
NPIPB4-215	ENST00000542133	RPUSD1	Q9UJJ7	312 aa	Known RBP	6.23	□□□□□ -1.41
NPIPB4-215	ENST00000542133	ZNF443	Q9Y2A4	671 aa	Predicted RBP	6.23	□□□□□ -1.41
NPIPB4-215	ENST00000542133	POLDIP2	Q9Y2S7	368 aa		6.23	□□□□□ -1.41
NPIPB4-215	ENST00000542133		V9GYS6	101 aa		6.23	□□□□□ -1.41
NPIPB4-215	ENST00000542133	FRAS1	Q86XX4	4008 aa		6.23	□□□□□ -1.41
NPIPB4-215	ENST00000542133	RPS10-NUDT3	A0A1W2PQS6	291 aa		6.22	□□□□□ -1.41
NPIPB4-215	ENST00000542133	NPIPB11	E5RHQ5	1161 aa		6.22	□□□□□ -1.41
NPIPB4-215	ENST00000542133	SIRPB1	O00241	398 aa		6.22	□□□□□ -1.41
NPIPB4-215	ENST00000542133	SLC1A7	O00341	560 aa		6.22	□□□□□ -1.41
NPIPB4-215	ENST00000542133	CPSF4	O95639	269 aa	Known RBP	6.22	□□□□□ -1.41
NPIPB4-215	ENST00000542133	NUDT3	O95989	172 aa		6.22	□□□□□ -1.41
NPIPB4-215	ENST00000542133	BGLAP	P02818	100 aa		6.22	□□□□□ -1.41
NPIPB4-215	ENST00000542133	CSN3	P07498	182 aa		6.22	□□□□□ -1.41
NPIPB4-215	ENST00000542133	PGA4	P0DJD7	388 aa		6.22	□□□□□ -1.41
NPIPB4-215	ENST00000542133	PGA3	P0DJD8	388 aa		6.22	□□□□□ -1.41
NPIPB4-215	ENST00000542133	ZNF32	P17041	273 aa		6.22	□□□□□ -1.41
NPIPB4-215	ENST00000542133	PVALB	P20472	110 aa	Predicted RBP	6.22	□□□□□ -1.41
NPIPB4-215	ENST00000542133	HOXD3	P31249	432 aa	Predicted RBP	6.22	□□□□□ -1.41
NPIPB4-215	ENST00000542133	OR3A4P	P47883	348 aa		6.22	□□□□□ -1.41
NPIPB4-215	ENST00000542133	SULT1A1	P50225	295 aa		6.22	□□□□□ -1.41
NPIPB4-215	ENST00000542133	SULT1A2	P50226	295 aa		6.22	□□□□□ -1.41
NPIPB4-215	ENST00000542133	TAS2R43	P59537	309 aa		6.22	□□□□□ -1.41
NPIPB4-215	ENST00000542133	SNRPE	P62304	92 aa	Known RBP	6.22	□□□□□ -1.41
NPIPB4-215	ENST00000542133	SLC35A2	P78381	396 aa		6.22	□□□□□ -1.41
NPIPB4-215	ENST00000542133	HOXC5	Q00444	222 aa		6.22	□□□□□ -1.41
NPIPB4-215	ENST00000542133	MFGE8	Q08431	387 aa	Predicted RBP	6.22	□□□□□ -1.41
NPIPB4-215	ENST00000542133	OR2F1	Q13607	317 aa		6.22	□□□□□ -1.41
NPIPB4-215	ENST00000542133	EDDM3A	Q14507	147 aa		6.22	□□□□□ -1.41
NPIPB4-215	ENST00000542133	KIR2DS1	Q14954	304 aa		6.22	□□□□□ -1.41
NPIPB4-215	ENST00000542133	CD276	Q5ZPR3	534 aa		6.22	□□□□□ -1.41
NPIPB4-215	ENST00000542133	C16orf89	Q6UX73	402 aa		6.22	□□□□□ -1.41
NPIPB4-215	ENST00000542133	C19orf35	Q6ZS72	473 aa		6.22	□□□□□ -1.41
NPIPB4-215	ENST00000542133	CCDC190	Q86UF4	302 aa		6.22	□□□□□ -1.41
NPIPB4-215	ENST00000542133	BOLL	Q8N9W6	283 aa	Known RBP	6.22	□□□□□ -1.41
NPIPB4-215	ENST00000542133	OR10V1	Q8NGI7	309 aa		6.22	□□□□□ -1.41
NPIPB4-215	ENST00000542133	REEP6	Q96HR9	211 aa		6.22	□□□□□ -1.41
NPIPB4-215	ENST00000542133	ST6GAL2	Q96JF0	529 aa		6.22	□□□□□ -1.41
NPIPB4-215	ENST00000542133	SMIM8	Q96KF7	97 aa		6.22	□□□□□ -1.41
NPIPB4-215	ENST00000542133	HIST1H2AA	Q96QV6	131 aa		6.22	□□□□□ -1.41
NPIPB4-215	ENST00000542133	SNHG12	Q9BXW3	62 aa		6.22	□□□□□ -1.41
NPIPB4-215	ENST00000542133	KRTAP9-2	Q9BYQ4	174 aa		6.22	□□□□□ -1.41
NPIPB4-215	ENST00000542133	C11orf54	Q9H0W9	315 aa	Predicted RBP	6.22	□□□□□ -1.41
NPIPB4-215	ENST00000542133	GNG12	Q9UBI6	72 aa		6.22	□□□□□ -1.41
NPIPB4-215	ENST00000542133	CTSZ	Q9UBR2	303 aa		6.22	□□□□□ -1.41
NPIPB4-215	ENST00000542133	SS18L2	Q9UHA2	77 aa		6.22	□□□□□ -1.41
NPIPB4-215	ENST00000542133	C14orf166	Q9Y224	244 aa	Known RBP	6.22	□□□□□ -1.41
NPIPB4-215	ENST00000542133	TIMM10B	Q9Y5J6	103 aa		6.22	□□□□□ -1.41
NPIPB4-215	ENST00000542133		A0A1B0GWA3	101 aa		6.21	□□□□□ -1.42
NPIPB4-215	ENST00000542133	CXorf65	A6NEN9	183 aa		6.21	□□□□□ -1.42
NPIPB4-215	ENST00000542133	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	6.21	□□□□□ -1.42
NPIPB4-215	ENST00000542133	ARSB	P15848	533 aa		6.21	□□□□□ -1.42
NPIPB4-215	ENST00000542133	ZBTB25	P24278	435 aa		6.21	□□□□□ -1.42
NPIPB4-215	ENST00000542133	FGF9	P31371	208 aa	Predicted RBP	6.21	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms