RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 SNX22Q96L94 193 aa8.82□□□□□ -1
CHFR-219ENST00000541341 FAM173AQ9BQD7 235 aa8.82□□□□□ -1
CHFR-219ENST00000541341 DEFB127Q9H1M4 99 aa8.82□□□□□ -1
CHFR-219ENST00000541341 CRLF2Q9HC73 371 aa8.82□□□□□ -1
CHFR-219ENST00000541341 DEPPQ9NTK1 212 aa8.82□□□□□ -1
CHFR-219ENST00000541341 MRPS18CQ9Y3D5 142 aaKnown RBP8.82□□□□□ -1
CHFR-219ENST00000541341 SETD2Q9BYW2 2564 aaPredicted RBP8.82□□□□□ -1
CHFR-219ENST00000541341 CCDC168Q8NDH2 2452 aa8.81□□□□□ -1
CHFR-219ENST00000541341 VPS13CQ709C8 3753 aa8.81□□□□□ -1
CHFR-219ENST00000541341 TRBV9A0A0B4J1U6 114 aa8.81□□□□□ -1
CHFR-219ENST00000541341 hCG_38984A0A1B0GV85 526 aa8.81□□□□□ -1
CHFR-219ENST00000541341 FAM166BA8MTA8 275 aa8.81□□□□□ -1
CHFR-219ENST00000541341 ZNF705GA8MUZ8 300 aaPredicted RBP8.81□□□□□ -1
CHFR-219ENST00000541341 KLRC4-KLRK1H3BQV0 150 aa8.81□□□□□ -1
CHFR-219ENST00000541341 TNFSF11O14788 317 aa8.81□□□□□ -1
CHFR-219ENST00000541341 EFNA2O43921 213 aa8.81□□□□□ -1
CHFR-219ENST00000541341 MPDU1O75352 247 aa8.81□□□□□ -1
CHFR-219ENST00000541341 PGLYRP1O75594 196 aaPredicted RBP8.81□□□□□ -1
CHFR-219ENST00000541341 CST7O76096 145 aa8.81□□□□□ -1
CHFR-219ENST00000541341 SYNGR4O95473 234 aa8.81□□□□□ -1
CHFR-219ENST00000541341 AMBPP02760 352 aa8.81□□□□□ -1
CHFR-219ENST00000541341 OPN1LWP04000 364 aa8.81□□□□□ -1
CHFR-219ENST00000541341 KLK2P20151 261 aa8.81□□□□□ -1
CHFR-219ENST00000541341 TPPP2P59282 170 aa8.81□□□□□ -1
CHFR-219ENST00000541341 TESK1Q15569 626 aa8.81□□□□□ -1
CHFR-219ENST00000541341 ADIRFQ15847 76 aa8.81□□□□□ -1
CHFR-219ENST00000541341 ACTL10Q5JWF8 245 aa8.81□□□□□ -1
CHFR-219ENST00000541341 PRAMEF20Q5VT98 475 aa8.81□□□□□ -1
CHFR-219ENST00000541341 ZNF343Q6P1L6 599 aa8.81□□□□□ -1
CHFR-219ENST00000541341 GAPTQ8N292 157 aa8.81□□□□□ -1
CHFR-219ENST00000541341 WDR31Q8NA23 367 aa8.81□□□□□ -1
CHFR-219ENST00000541341 OR2M7Q8NG81 312 aa8.81□□□□□ -1
CHFR-219ENST00000541341 OR5A2Q8NGI9 324 aa8.81□□□□□ -1
CHFR-219ENST00000541341 TMEM171Q8WVE6 324 aa8.81□□□□□ -1
CHFR-219ENST00000541341 NEIL1Q96FI4 390 aaPredicted RBP8.81□□□□□ -1
CHFR-219ENST00000541341 WDR61Q9GZS3 305 aaKnown RBP8.81□□□□□ -1
CHFR-219ENST00000541341 GLRX2Q9NS18 164 aa8.81□□□□□ -1
CHFR-219ENST00000541341 RPRMQ9NS64 109 aa8.81□□□□□ -1
CHFR-219ENST00000541341 TMEM38BQ9NVV0 291 aa8.81□□□□□ -1
CHFR-219ENST00000541341 FKBP11Q9NYL4 201 aa8.81□□□□□ -1
CHFR-219ENST00000541341 OR6C3Q9NZP0 311 aa8.81□□□□□ -1
CHFR-219ENST00000541341 OR14J1Q9UGF5 321 aa8.81□□□□□ -1
CHFR-219ENST00000541341 HRNRQ86YZ3 2850 aaPredicted RBP8.81□□□□□ -1
CHFR-219ENST00000541341 NF1P21359 2839 aa8.81□□□□□ -1
CHFR-219ENST00000541341 A0A0G2JMM0 328 aa8.8□□□□□ -1
CHFR-219ENST00000541341 A0A1W2PPB8 328 aa8.8□□□□□ -1
CHFR-219ENST00000541341 A0A1W2PRS3 328 aa8.8□□□□□ -1
CHFR-219ENST00000541341 PINLYPA6NC86 204 aa8.8□□□□□ -1
CHFR-219ENST00000541341 LRRC3CA6NJW4 275 aa8.8□□□□□ -1
CHFR-219ENST00000541341 SLC22A20A6NK97 555 aa8.8□□□□□ -1
CHFR-219ENST00000541341 OR5B21A6NL26 309 aa8.8□□□□□ -1
CHFR-219ENST00000541341 TMEM210A6NLX4 147 aa8.8□□□□□ -1
CHFR-219ENST00000541341 KIR3DP1A8MWS1 328 aa8.8□□□□□ -1
CHFR-219ENST00000541341 E9PLN8 166 aa8.8□□□□□ -1
CHFR-219ENST00000541341 TMPRSS2O15393 492 aa8.8□□□□□ -1
CHFR-219ENST00000541341 SPRY1O43609 319 aaPredicted RBP8.8□□□□□ -1
CHFR-219ENST00000541341 MT-CO2P00403 227 aa8.8□□□□□ -1
CHFR-219ENST00000541341 PAX5Q02548 391 aa8.8□□□□□ -1
CHFR-219ENST00000541341 ZNF154Q13106 437 aa8.8□□□□□ -1
CHFR-219ENST00000541341 CXorf66Q5JRM2 361 aaPredicted RBP8.8□□□□□ -1
CHFR-219ENST00000541341 C16orf82Q7Z2V1 217 aa8.8□□□□□ -1
CHFR-219ENST00000541341 P4HA3Q7Z4N8 544 aa8.8□□□□□ -1
CHFR-219ENST00000541341 ZNF573Q86YE8 665 aa8.8□□□□□ -1
CHFR-219ENST00000541341 ZNF525Q8N782 197 aa8.8□□□□□ -1
CHFR-219ENST00000541341 TMEM217Q8N7C4 229 aa8.8□□□□□ -1
CHFR-219ENST00000541341 ZNF611Q8N823 705 aa8.8□□□□□ -1
CHFR-219ENST00000541341 FAM57AQ8TBR7 257 aa8.8□□□□□ -1
CHFR-219ENST00000541341 NEK7Q8TDX7 302 aa8.8□□□□□ -1
CHFR-219ENST00000541341 TAF15Q92804 592 aaKnown RBP eCLIP8.8□□□□□ -1
CHFR-219ENST00000541341 RAB1CQ92928 201 aa8.8□□□□□ -1
CHFR-219ENST00000541341 RBM14Q96PK6 669 aaKnown RBP8.8□□□□□ -1
CHFR-219ENST00000541341 VKORC1Q9BQB6 163 aa8.8□□□□□ -1
CHFR-219ENST00000541341 HDHD3Q9BSH5 251 aaPredicted RBP8.8□□□□□ -1
CHFR-219ENST00000541341 TMEM147Q9BVK8 224 aa8.8□□□□□ -1
CHFR-219ENST00000541341 C1QTNF5Q9BXJ0 243 aa8.8□□□□□ -1
CHFR-219ENST00000541341 LIME1Q9H400 295 aa8.8□□□□□ -1
CHFR-219ENST00000541341 BOKQ9UMX3 212 aaPredicted RBP8.8□□□□□ -1
CHFR-219ENST00000541341 GAB2Q9UQC2 676 aa8.8□□□□□ -1
CHFR-219ENST00000541341 MPC1Q9Y5U8 109 aa8.8□□□□□ -1
CHFR-219ENST00000541341 MAP1AP78559 2803 aaPredicted RBP8.8□□□□□ -1
CHFR-219ENST00000541341 A0A1B0GV50 99 aa8.79□□□□□ -1
CHFR-219ENST00000541341 A0A1W2PNR3 127 aa8.79□□□□□ -1
CHFR-219ENST00000541341 A8MXE2 369 aa8.79□□□□□ -1
CHFR-219ENST00000541341 J3QW42 95 aa8.79□□□□□ -1
CHFR-219ENST00000541341 ANGPTL7O43827 346 aa8.79□□□□□ -1
CHFR-219ENST00000541341 MMP23AO75900 390 aa8.79□□□□□ -1
CHFR-219ENST00000541341 RPLP1P05386 114 aaKnown RBP8.79□□□□□ -1
CHFR-219ENST00000541341 BTF3P20290 206 aaKnown RBP8.79□□□□□ -1
CHFR-219ENST00000541341 PPP1CBP62140 327 aa8.79□□□□□ -1
CHFR-219ENST00000541341 COL10A1Q03692 680 aa8.79□□□□□ -1
CHFR-219ENST00000541341 TNFRSF9Q07011 255 aa8.79□□□□□ -1
CHFR-219ENST00000541341 CATR1Q13166 79 aa8.79□□□□□ -1
CHFR-219ENST00000541341 TMEM183BQ1AE95 376 aa8.79□□□□□ -1
CHFR-219ENST00000541341 RSPO1Q2MKA7 263 aaPredicted RBP8.79□□□□□ -1
CHFR-219ENST00000541341 CEACAM21Q3KPI0 293 aa8.79□□□□□ -1
CHFR-219ENST00000541341 TSPO2Q5TGU0 170 aa8.79□□□□□ -1
CHFR-219ENST00000541341 ZNF818PQ6ZRF7 136 aa8.79□□□□□ -1
CHFR-219ENST00000541341 ZNF664Q8N3J9 261 aa8.79□□□□□ -1
CHFR-219ENST00000541341 GBGT1Q8N5D6 347 aa8.79□□□□□ -1
CHFR-219ENST00000541341 OR10V1Q8NGI7 309 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms