RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 IFNA1P01562 189 aa10.5□□□□□ -0.73
RNF4-222ENST00000541204 ACSF3Q4G176 576 aaPredicted RBP10.5□□□□□ -0.73
RNF4-222ENST00000541204 IGFL2Q6UWQ7 119 aa10.5□□□□□ -0.73
RNF4-222ENST00000541204 RPRMLQ8N4K4 120 aa10.5□□□□□ -0.73
RNF4-222ENST00000541204 PINX1Q96BK5 328 aaKnown RBP10.5□□□□□ -0.73
RNF4-222ENST00000541204 RPUSD4Q96CM3 377 aaKnown RBP10.5□□□□□ -0.73
RNF4-222ENST00000541204 PACRGQ96M98 296 aaPredicted RBP10.5□□□□□ -0.73
RNF4-222ENST00000541204 GTF3C1Q12789 2109 aa10.5□□□□□ -0.73
RNF4-222ENST00000541204 K7EM74 188 aa10.49□□□□□ -0.73
RNF4-222ENST00000541204 TM4SF5O14894 197 aa10.49□□□□□ -0.73
RNF4-222ENST00000541204 RAMP3O60896 148 aa10.49□□□□□ -0.73
RNF4-222ENST00000541204 NCR3LG1Q68D85 454 aa10.49□□□□□ -0.73
RNF4-222ENST00000541204 C16orf82Q7Z2V1 217 aa10.49□□□□□ -0.73
RNF4-222ENST00000541204 ZADH2Q8N4Q0 377 aa10.49□□□□□ -0.73
RNF4-222ENST00000541204 WDR31Q8NA23 367 aa10.49□□□□□ -0.73
RNF4-222ENST00000541204 HIST1H2BLQ99880 126 aa10.49□□□□□ -0.73
RNF4-222ENST00000541204 SLC25A22Q9H936 323 aa10.49□□□□□ -0.73
RNF4-222ENST00000541204 INTS1Q8N201 2190 aaKnown RBP10.49□□□□□ -0.73
RNF4-222ENST00000541204 CECR9P0C854 216 aa10.49□□□□□ -0.73
RNF4-222ENST00000541204 MEF2BQ02080 365 aaPredicted RBP10.49□□□□□ -0.73
RNF4-222ENST00000541204 PRAMEF6Q5VXH4 476 aa10.49□□□□□ -0.73
RNF4-222ENST00000541204 FAM53AQ6NSI3 398 aaPredicted RBP10.49□□□□□ -0.73
RNF4-222ENST00000541204 ACSM6Q6P461 480 aa10.49□□□□□ -0.73
RNF4-222ENST00000541204 INO80CQ6PI98 192 aaPredicted RBP10.49□□□□□ -0.73
RNF4-222ENST00000541204 MOB1BQ7L9L4 216 aa10.49□□□□□ -0.73
RNF4-222ENST00000541204 OR10A7Q8NGE5 316 aa10.49□□□□□ -0.73
RNF4-222ENST00000541204 OR4X1Q8NH49 305 aa10.49□□□□□ -0.73
RNF4-222ENST00000541204 CTDSP1Q9GZU7 261 aa10.49□□□□□ -0.73
RNF4-222ENST00000541204 NAT8Q9UHE5 227 aa10.49□□□□□ -0.73
RNF4-222ENST00000541204 CEP295Q9C0D2 2601 aa10.49□□□□□ -0.73
RNF4-222ENST00000541204 PRR33A8MZF0 331 aa10.48□□□□□ -0.73
RNF4-222ENST00000541204 KRASP01116 189 aa10.48□□□□□ -0.73
RNF4-222ENST00000541204 RAC2P15153 192 aa10.48□□□□□ -0.73
RNF4-222ENST00000541204 TUBG1P23258 451 aa10.48□□□□□ -0.73
RNF4-222ENST00000541204 G6PCP35575 357 aa10.48□□□□□ -0.73
RNF4-222ENST00000541204 RPS16P62249 146 aaKnown RBP10.48□□□□□ -0.73
RNF4-222ENST00000541204 TNFRSF9Q07011 255 aa10.48□□□□□ -0.73
RNF4-222ENST00000541204 TMEM241Q24JQ0 296 aa10.48□□□□□ -0.73
RNF4-222ENST00000541204 ZNF600Q6ZNG1 722 aa10.48□□□□□ -0.73
RNF4-222ENST00000541204 PRSS33Q8NF86 280 aa10.48□□□□□ -0.73
RNF4-222ENST00000541204 GATAD1Q8WUU5 269 aa10.48□□□□□ -0.73
RNF4-222ENST00000541204 DKK4Q9UBT3 224 aa10.48□□□□□ -0.73
RNF4-222ENST00000541204 GAB2Q9UQC2 676 aa10.48□□□□□ -0.73
RNF4-222ENST00000541204 ZNF891A8MT65 544 aaPredicted RBP10.48□□□□□ -0.73
RNF4-222ENST00000541204 MLNRO43193 412 aa10.48□□□□□ -0.73
RNF4-222ENST00000541204 KLK10O43240 276 aa10.48□□□□□ -0.73
RNF4-222ENST00000541204 TGOLN2O43493 480 aa10.48□□□□□ -0.73
RNF4-222ENST00000541204 TIMM8AO60220 97 aaPredicted RBP10.48□□□□□ -0.73
RNF4-222ENST00000541204 ZNF816Q0VGE8 651 aaPredicted RBP10.48□□□□□ -0.73
RNF4-222ENST00000541204 GUSBP1Q15486 140 aa10.48□□□□□ -0.73
RNF4-222ENST00000541204 CLEC12BQ2HXU8 276 aa10.48□□□□□ -0.73
RNF4-222ENST00000541204 TMEM14EPQ6UXP3 125 aa10.48□□□□□ -0.73
RNF4-222ENST00000541204 C14orf144Q96I85 54 aa10.48□□□□□ -0.73
RNF4-222ENST00000541204 PARD6GQ9BYG4 376 aaPredicted RBP10.48□□□□□ -0.73
RNF4-222ENST00000541204 PRO1933Q9H354 126 aa10.48□□□□□ -0.73
RNF4-222ENST00000541204 CLN8Q9UBY8 286 aa10.48□□□□□ -0.73
RNF4-222ENST00000541204 POLDIP2Q9Y2S7 368 aa10.48□□□□□ -0.73
RNF4-222ENST00000541204 SMG1Q96Q15 3661 aaKnown RBP10.48□□□□□ -0.73
RNF4-222ENST00000541204 CADP27708 2225 aa10.48□□□□□ -0.73
RNF4-222ENST00000541204 RTP5Q14D33 572 aa10.48□□□□□ -0.73
RNF4-222ENST00000541204 CYP2G1PQ6ZSU1 146 aa10.48□□□□□ -0.73
RNF4-222ENST00000541204 MBNL3Q9NUK0 354 aaKnown RBP10.48□□□□□ -0.73
RNF4-222ENST00000541204 PITPNC1Q9UKF7 332 aa10.48□□□□□ -0.73
RNF4-222ENST00000541204 TNFSF13O75888 250 aa10.47□□□□□ -0.73
RNF4-222ENST00000541204 PFN1P07737 140 aaKnown RBP10.47□□□□□ -0.73
RNF4-222ENST00000541204 ERVK11-1P61568 191 aa10.47□□□□□ -0.73
RNF4-222ENST00000541204 RPL23P62829 140 aaKnown RBP10.47□□□□□ -0.73
RNF4-222ENST00000541204 BSXQ3C1V8 233 aa10.47□□□□□ -0.73
RNF4-222ENST00000541204 UNQ6494/PRO21346Q6UXR6 183 aa10.47□□□□□ -0.73
RNF4-222ENST00000541204 ZNF808Q8N4W9 903 aaPredicted RBP10.47□□□□□ -0.73
RNF4-222ENST00000541204 TPRX1Q8N7U7 411 aa10.47□□□□□ -0.73
RNF4-222ENST00000541204 STARD4Q96DR4 205 aa10.47□□□□□ -0.73
RNF4-222ENST00000541204 PROCRQ9UNN8 238 aa10.47□□□□□ -0.73
RNF4-222ENST00000541204 SMCO3A2RU48 225 aa10.47□□□□□ -0.73
RNF4-222ENST00000541204 PSPNO60542 156 aa10.47□□□□□ -0.73
RNF4-222ENST00000541204 KBTBD11O94819 623 aa10.47□□□□□ -0.73
RNF4-222ENST00000541204 GZMHP20718 246 aa10.47□□□□□ -0.73
RNF4-222ENST00000541204 IL2RGP31785 369 aa10.47□□□□□ -0.73
RNF4-222ENST00000541204 RPL30P62888 115 aaKnown RBP10.47□□□□□ -0.73
RNF4-222ENST00000541204 COL10A1Q03692 680 aa10.47□□□□□ -0.73
RNF4-222ENST00000541204 SEM1Q6ZVN7 128 aa10.47□□□□□ -0.73
RNF4-222ENST00000541204 OR1L1Q8NH94 360 aa10.47□□□□□ -0.73
RNF4-222ENST00000541204 AGMATQ9BSE5 352 aa10.47□□□□□ -0.73
RNF4-222ENST00000541204 OR2D2Q9H210 308 aa10.47□□□□□ -0.73
RNF4-222ENST00000541204 PARLQ9H300 379 aa10.47□□□□□ -0.73
RNF4-222ENST00000541204 SRD5A3Q9H8P0 318 aa10.47□□□□□ -0.73
RNF4-222ENST00000541204 DUSP13Q9UII6 198 aa10.47□□□□□ -0.73
RNF4-222ENST00000541204 LAMP3Q9UQV4 416 aa10.47□□□□□ -0.73
RNF4-222ENST00000541204 WIPI2Q9Y4P8 454 aa10.47□□□□□ -0.73
RNF4-222ENST00000541204 DOCK11Q5JSL3 2073 aa10.47□□□□□ -0.73
RNF4-222ENST00000541204 IQCF6A8MYZ5 107 aa10.46□□□□□ -0.73
RNF4-222ENST00000541204 FAM90A26D6RGX4 464 aa10.46□□□□□ -0.73
RNF4-222ENST00000541204 IGKV3-15P01624 115 aa10.46□□□□□ -0.73
RNF4-222ENST00000541204 DEFA4P12838 97 aa10.46□□□□□ -0.73
RNF4-222ENST00000541204 PSMB3P49720 205 aa10.46□□□□□ -0.73
RNF4-222ENST00000541204 OR10G9Q8NGN4 311 aa10.46□□□□□ -0.73
RNF4-222ENST00000541204 OR10G7Q8NGN6 311 aa10.46□□□□□ -0.73
RNF4-222ENST00000541204 ZDHHC16Q969W1 377 aa10.46□□□□□ -0.73
RNF4-222ENST00000541204 C5orf30Q96GV9 206 aa10.46□□□□□ -0.73
RNF4-222ENST00000541204 ELOVL1Q9BW60 279 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms