RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 SLC2A8Q9NY64 477 aa14.08□□□□□ -0.16
CLSTN3-210ENST00000540931 WASHC3Q9Y3C0 194 aa14.08□□□□□ -0.16
CLSTN3-210ENST00000540931 A0A1B0GUS0 222 aa14.07□□□□□ -0.16
CLSTN3-210ENST00000540931 A6NDX4 124 aa14.07□□□□□ -0.16
CLSTN3-210ENST00000540931 M0R1X1 148 aa14.07□□□□□ -0.16
CLSTN3-210ENST00000540931 FGF16O43320 207 aa14.07□□□□□ -0.16
CLSTN3-210ENST00000540931 AMY2AP04746 511 aa14.07□□□□□ -0.16
CLSTN3-210ENST00000540931 TMEM11P17152 192 aa14.07□□□□□ -0.16
CLSTN3-210ENST00000540931 REG1BP48304 166 aa14.07□□□□□ -0.16
CLSTN3-210ENST00000540931 FAM53AQ6NSI3 398 aaPredicted RBP14.07□□□□□ -0.16
CLSTN3-210ENST00000540931 BVESQ8NE79 360 aa14.07□□□□□ -0.16
CLSTN3-210ENST00000540931 OR4C13Q8NGP0 309 aa14.07□□□□□ -0.16
CLSTN3-210ENST00000540931 PIFOQ8TCI5 191 aa14.07□□□□□ -0.16
CLSTN3-210ENST00000540931 RBM14Q96PK6 669 aaKnown RBP14.07□□□□□ -0.16
CLSTN3-210ENST00000540931 CHIAQ9BZP6 476 aa14.07□□□□□ -0.16
CLSTN3-210ENST00000540931 PARP12Q9H0J9 701 aaKnown RBP14.07□□□□□ -0.16
CLSTN3-210ENST00000540931 AKIP1Q9NQ31 210 aa14.07□□□□□ -0.16
CLSTN3-210ENST00000540931 SOX21Q9Y651 276 aaPredicted RBP14.07□□□□□ -0.16
CLSTN3-210ENST00000540931 GPR31O00270 319 aa14.06□□□□□ -0.16
CLSTN3-210ENST00000540931 B3GALNT1O75752 331 aa14.06□□□□□ -0.16
CLSTN3-210ENST00000540931 VENTXO95231 258 aa14.06□□□□□ -0.16
CLSTN3-210ENST00000540931 SNRNP70P08621 437 aaKnown RBP14.06□□□□□ -0.16
CLSTN3-210ENST00000540931 CT45A6P0DMU7 189 aa14.06□□□□□ -0.16
CLSTN3-210ENST00000540931 CT45A5P0DMU8 189 aa14.06□□□□□ -0.16
CLSTN3-210ENST00000540931 CT45A7P0DMV0 189 aa14.06□□□□□ -0.16
CLSTN3-210ENST00000540931 LGALS7P47929 136 aa14.06□□□□□ -0.16
CLSTN3-210ENST00000540931 FXYD4P59646 89 aa14.06□□□□□ -0.16
CLSTN3-210ENST00000540931 RPL39P5Q59GN2 51 aa14.06□□□□□ -0.16
CLSTN3-210ENST00000540931 ZNF57Q68EA5 555 aaPredicted RBP14.06□□□□□ -0.16
CLSTN3-210ENST00000540931 C11orf88Q6PI97 169 aa14.06□□□□□ -0.16
CLSTN3-210ENST00000540931 TRIM63Q969Q1 353 aa14.06□□□□□ -0.16
CLSTN3-210ENST00000540931 MRPL20Q9BYC9 149 aaKnown RBP14.06□□□□□ -0.16
CLSTN3-210ENST00000540931 ESM1Q9NQ30 184 aa14.06□□□□□ -0.16
CLSTN3-210ENST00000540931 FAM212BQ9NTI7 297 aaPredicted RBP14.06□□□□□ -0.16
CLSTN3-210ENST00000540931 PIGBOS1A0A0B4J2F0 54 aa14.05□□□□□ -0.16
CLSTN3-210ENST00000540931 H7C2Y5 167 aa14.05□□□□□ -0.16
CLSTN3-210ENST00000540931 M0QYG6 137 aa14.05□□□□□ -0.16
CLSTN3-210ENST00000540931 GPR137BO60478 399 aa14.05□□□□□ -0.16
CLSTN3-210ENST00000540931 IGKV1D-33P01593 117 aa14.05□□□□□ -0.16
CLSTN3-210ENST00000540931 IGKV1-33P01594 117 aa14.05□□□□□ -0.16
CLSTN3-210ENST00000540931 DUTP33316 252 aaKnown RBP14.05□□□□□ -0.16
CLSTN3-210ENST00000540931 DIAPH2-AS1Q14236 149 aa14.05□□□□□ -0.16
CLSTN3-210ENST00000540931 LHFPL1Q86WI0 220 aa14.05□□□□□ -0.16
CLSTN3-210ENST00000540931 FLYWCH2Q96CP2 140 aaKnown RBP14.05□□□□□ -0.16
CLSTN3-210ENST00000540931 TSNAXQ99598 290 aaKnown RBP14.05□□□□□ -0.16
CLSTN3-210ENST00000540931 TINAGL1Q9GZM7 467 aaPredicted RBP14.05□□□□□ -0.16
CLSTN3-210ENST00000540931 MOB4Q9Y3A3 225 aa14.05□□□□□ -0.16
CLSTN3-210ENST00000540931 IGKV1D-13A0A0B4J2D9 117 aa14.04□□□□□ -0.16
CLSTN3-210ENST00000540931 H0YJW9 148 aa14.04□□□□□ -0.16
CLSTN3-210ENST00000540931 RBFOX2O43251 390 aaKnown RBP eCLIP14.04□□□□□ -0.16
CLSTN3-210ENST00000540931 SPDEFO95238 335 aa14.04□□□□□ -0.16
CLSTN3-210ENST00000540931 IGKV1-13P0DP09 117 aa14.04□□□□□ -0.16
CLSTN3-210ENST00000540931 KLF9Q13886 244 aaPredicted RBP14.04□□□□□ -0.16
CLSTN3-210ENST00000540931 SCGB2B2Q4G0G5 96 aa14.04□□□□□ -0.16
CLSTN3-210ENST00000540931 ABCA11PQ4W5N1 156 aa14.04□□□□□ -0.16
CLSTN3-210ENST00000540931 KCTD9Q7L273 389 aa14.04□□□□□ -0.16
CLSTN3-210ENST00000540931 CCDC71LQ8N9Z2 235 aa14.04□□□□□ -0.16
CLSTN3-210ENST00000540931 OR4C16Q8NGL9 310 aa14.04□□□□□ -0.16
CLSTN3-210ENST00000540931 OSR1Q8TAX0 266 aaPredicted RBP14.04□□□□□ -0.16
CLSTN3-210ENST00000540931 EAF1Q96JC9 268 aaPredicted RBP14.04□□□□□ -0.16
CLSTN3-210ENST00000540931 SLC25A21Q9BQT8 299 aaPredicted RBP14.04□□□□□ -0.16
CLSTN3-210ENST00000540931 SLC25A33Q9BSK2 321 aa14.04□□□□□ -0.16
CLSTN3-210ENST00000540931 SLC35D1Q9NTN3 355 aa14.04□□□□□ -0.16
CLSTN3-210ENST00000540931 MCUBQ9NWR8 336 aa14.04□□□□□ -0.16
CLSTN3-210ENST00000540931 KIAA1456Q9P272 454 aa14.04□□□□□ -0.16
CLSTN3-210ENST00000540931 SVEP1Q4LDE5 3571 aa14.04□□□□□ -0.16
CLSTN3-210ENST00000540931 FAM181BA6NEQ2 426 aa14.03□□□□□ -0.16
CLSTN3-210ENST00000540931 NDUFA7O95182 113 aa14.03□□□□□ -0.16
CLSTN3-210ENST00000540931 PGAM2P15259 253 aa14.03□□□□□ -0.16
CLSTN3-210ENST00000540931 GNRHRP30968 328 aa14.03□□□□□ -0.16
CLSTN3-210ENST00000540931 FOXL1Q12952 345 aa14.03□□□□□ -0.16
CLSTN3-210ENST00000540931 LY6EQ16553 131 aa14.03□□□□□ -0.16
CLSTN3-210ENST00000540931 MFSD4AQ8N468 514 aa14.03□□□□□ -0.16
CLSTN3-210ENST00000540931 OR4F5Q8NH21 305 aa14.03□□□□□ -0.16
CLSTN3-210ENST00000540931 OR4S2Q8NH73 311 aa14.03□□□□□ -0.16
CLSTN3-210ENST00000540931 RSRP1Q9BUV0 290 aa14.03□□□□□ -0.16
CLSTN3-210ENST00000540931 PRSS22Q9GZN4 317 aa14.03□□□□□ -0.16
CLSTN3-210ENST00000540931 CCL28Q9NRJ3 127 aa14.03□□□□□ -0.16
CLSTN3-210ENST00000540931 LIN7CQ9NUP9 197 aaKnown RBP14.03□□□□□ -0.16
CLSTN3-210ENST00000540931 C14orf166Q9Y224 244 aaKnown RBP14.03□□□□□ -0.16
CLSTN3-210ENST00000540931 J3QRK9 145 aa14.02□□□□□ -0.17
CLSTN3-210ENST00000540931 CREBL2O60519 120 aaPredicted RBP14.02□□□□□ -0.17
CLSTN3-210ENST00000540931 PROP1O75360 226 aa14.02□□□□□ -0.17
CLSTN3-210ENST00000540931 IL7P13232 177 aa14.02□□□□□ -0.17
CLSTN3-210ENST00000540931 RND3P61587 244 aa14.02□□□□□ -0.17
CLSTN3-210ENST00000540931 AADACL3Q5VUY0 350 aa14.02□□□□□ -0.17
CLSTN3-210ENST00000540931 IDO2Q6ZQW0 420 aa14.02□□□□□ -0.17
CLSTN3-210ENST00000540931 ZNF818PQ6ZRF7 136 aa14.02□□□□□ -0.17
CLSTN3-210ENST00000540931 Q8N6K4 173 aa14.02□□□□□ -0.17
CLSTN3-210ENST00000540931 ZNF383Q8NA42 475 aa14.02□□□□□ -0.17
CLSTN3-210ENST00000540931 TCTEX1D2Q8WW35 142 aa14.02□□□□□ -0.17
CLSTN3-210ENST00000540931 TNFRSF19Q9NS68 423 aa14.02□□□□□ -0.17
CLSTN3-210ENST00000540931 NCBP2LA6PVI3 153 aaKnown RBP14.01□□□□□ -0.17
CLSTN3-210ENST00000540931 TSPAN9O75954 239 aa14.01□□□□□ -0.17
CLSTN3-210ENST00000540931 HRASP01112 189 aa14.01□□□□□ -0.17
CLSTN3-210ENST00000540931 CTSDP07339 412 aaPredicted RBP14.01□□□□□ -0.17
CLSTN3-210ENST00000540931 ZNF735P0CB33 412 aa14.01□□□□□ -0.17
CLSTN3-210ENST00000540931 HKR1P10072 659 aa14.01□□□□□ -0.17
CLSTN3-210ENST00000540931 TMEM177Q53S58 311 aa14.01□□□□□ -0.17
CLSTN3-210ENST00000540931 NPBQ8NG41 125 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms