RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 FLYWCH2Q96CP2 140 aaKnown RBP7.28□□□□□ -1.24
SNHG1-215ENST00000540904 CMTM3Q96MX0 182 aa7.28□□□□□ -1.24
SNHG1-215ENST00000540904 FBXL15Q9H469 300 aa7.28□□□□□ -1.24
SNHG1-215ENST00000540904 SLC35D1Q9NTN3 355 aa7.28□□□□□ -1.24
SNHG1-215ENST00000540904 NECAP2Q9NVZ3 263 aa7.28□□□□□ -1.24
SNHG1-215ENST00000540904 GAB2Q9UQC2 676 aa7.28□□□□□ -1.24
SNHG1-215ENST00000540904 ANK2Q01484 3957 aa7.28□□□□□ -1.24
SNHG1-215ENST00000540904 FBN3Q75N90 2809 aa7.27□□□□□ -1.25
SNHG1-215ENST00000540904 IGKV1D-13A0A0B4J2D9 117 aa7.27□□□□□ -1.25
SNHG1-215ENST00000540904 ADARB2-AS1A8MUL3 147 aa7.27□□□□□ -1.25
SNHG1-215ENST00000540904 NOL3O60936 208 aaKnown RBP7.27□□□□□ -1.25
SNHG1-215ENST00000540904 TUSC2O75896 110 aa7.27□□□□□ -1.25
SNHG1-215ENST00000540904 NDUFA3O95167 84 aa7.27□□□□□ -1.25
SNHG1-215ENST00000540904 HLA-DQB1P01920 261 aa7.27□□□□□ -1.25
SNHG1-215ENST00000540904 OPN1MWP04001 364 aa7.27□□□□□ -1.25
SNHG1-215ENST00000540904 OPN1MW2P0DN77 364 aa7.27□□□□□ -1.25
SNHG1-215ENST00000540904 OPN1MW3P0DN78 364 aa7.27□□□□□ -1.25
SNHG1-215ENST00000540904 OR5H8P0DN80 308 aa7.27□□□□□ -1.25
SNHG1-215ENST00000540904 IGKV1-13P0DP09 117 aa7.27□□□□□ -1.25
SNHG1-215ENST00000540904 AADACP22760 399 aa7.27□□□□□ -1.25
SNHG1-215ENST00000540904 FCGR2CP31995 323 aa7.27□□□□□ -1.25
SNHG1-215ENST00000540904 THBS3P49746 956 aa7.27□□□□□ -1.25
SNHG1-215ENST00000540904 TMBIM6P55061 237 aa7.27□□□□□ -1.25
SNHG1-215ENST00000540904 CBX3Q13185 183 aa7.27□□□□□ -1.25
SNHG1-215ENST00000540904 RTL8BQ17RB0 113 aa7.27□□□□□ -1.25
SNHG1-215ENST00000540904 SNX29P2Q8IUI4 249 aa7.27□□□□□ -1.25
SNHG1-215ENST00000540904 ZNF645Q8N7E2 425 aa7.27□□□□□ -1.25
SNHG1-215ENST00000540904 OR5AP2Q8NGF4 316 aa7.27□□□□□ -1.25
SNHG1-215ENST00000540904 R3HDM4Q96D70 268 aa7.27□□□□□ -1.25
SNHG1-215ENST00000540904 TSNAXQ99598 290 aaKnown RBP7.27□□□□□ -1.25
SNHG1-215ENST00000540904 RNF5Q99942 180 aa7.27□□□□□ -1.25
SNHG1-215ENST00000540904 GON7Q9BXV9 100 aa7.27□□□□□ -1.25
SNHG1-215ENST00000540904 PARP11Q9NR21 331 aa7.27□□□□□ -1.25
SNHG1-215ENST00000540904 METTL1Q9UBP6 276 aaKnown RBP7.27□□□□□ -1.25
SNHG1-215ENST00000540904 SCOCQ9UIL1 159 aa7.27□□□□□ -1.25
SNHG1-215ENST00000540904 TSSC4Q9Y5U2 329 aaPredicted RBP7.27□□□□□ -1.25
SNHG1-215ENST00000540904 IGHV7-81A0A0B4J1V7 117 aa7.26□□□□□ -1.25
SNHG1-215ENST00000540904 ATP6V0E1O15342 81 aa7.26□□□□□ -1.25
SNHG1-215ENST00000540904 RGS5O15539 181 aa7.26□□□□□ -1.25
SNHG1-215ENST00000540904 SLC25A17O43808 307 aa7.26□□□□□ -1.25
SNHG1-215ENST00000540904 SLC22A5O76082 557 aa7.26□□□□□ -1.25
SNHG1-215ENST00000540904 HLA-DRB1P01911 266 aa7.26□□□□□ -1.25
SNHG1-215ENST00000540904 PF4V1P10720 104 aa7.26□□□□□ -1.25
SNHG1-215ENST00000540904 VDAC1P21796 283 aa7.26□□□□□ -1.25
SNHG1-215ENST00000540904 DUTP33316 252 aaKnown RBP7.26□□□□□ -1.25
SNHG1-215ENST00000540904 RFX2P48378 723 aa7.26□□□□□ -1.25
SNHG1-215ENST00000540904 TAGLNQ01995 201 aaKnown RBP7.26□□□□□ -1.25
SNHG1-215ENST00000540904 CDK10Q15131 360 aa7.26□□□□□ -1.25
SNHG1-215ENST00000540904 PSG5Q15238 335 aa7.26□□□□□ -1.25
SNHG1-215ENST00000540904 KCTD9Q7L273 389 aa7.26□□□□□ -1.25
SNHG1-215ENST00000540904 BVESQ8NE79 360 aa7.26□□□□□ -1.25
SNHG1-215ENST00000540904 OR4F17Q8NGA8 305 aa7.26□□□□□ -1.25
SNHG1-215ENST00000540904 SECTM1Q8WVN6 248 aa7.26□□□□□ -1.25
SNHG1-215ENST00000540904 ISOC1Q96CN7 298 aa7.26□□□□□ -1.25
SNHG1-215ENST00000540904 ADTRPQ96IZ2 230 aa7.26□□□□□ -1.25
SNHG1-215ENST00000540904 HARBI1Q96MB7 349 aa7.26□□□□□ -1.25
SNHG1-215ENST00000540904 OR4F4Q96R69 305 aa7.26□□□□□ -1.25
SNHG1-215ENST00000540904 CLCC1Q96S66 551 aa7.26□□□□□ -1.25
SNHG1-215ENST00000540904 OR51J1Q9H342 316 aa7.26□□□□□ -1.25
SNHG1-215ENST00000540904 EHFQ9NZC4 300 aa7.26□□□□□ -1.25
SNHG1-215ENST00000540904 RBMX2Q9Y388 322 aaKnown RBP7.26□□□□□ -1.25
SNHG1-215ENST00000540904 WSB1Q9Y6I7 421 aa7.26□□□□□ -1.25
SNHG1-215ENST00000540904 LINC00473A8K010 186 aa7.25□□□□□ -1.25
SNHG1-215ENST00000540904 H3BMQ9 156 aa7.25□□□□□ -1.25
SNHG1-215ENST00000540904 FCN1O00602 326 aa7.25□□□□□ -1.25
SNHG1-215ENST00000540904 SHOXO15266 292 aa7.25□□□□□ -1.25
SNHG1-215ENST00000540904 SPDEFO95238 335 aa7.25□□□□□ -1.25
SNHG1-215ENST00000540904 CRYZL1O95825 349 aa7.25□□□□□ -1.25
SNHG1-215ENST00000540904 PPYP01298 95 aa7.25□□□□□ -1.25
SNHG1-215ENST00000540904 IGLV2-14P01704 120 aa7.25□□□□□ -1.25
SNHG1-215ENST00000540904 PMP2P02689 132 aa7.25□□□□□ -1.25
SNHG1-215ENST00000540904 IGF1P05019 195 aa7.25□□□□□ -1.25
SNHG1-215ENST00000540904 RRASP10301 218 aa7.25□□□□□ -1.25
SNHG1-215ENST00000540904 HLA-DMAP28067 261 aa7.25□□□□□ -1.25
SNHG1-215ENST00000540904 LGALS7P47929 136 aa7.25□□□□□ -1.25
SNHG1-215ENST00000540904 FXYD4P59646 89 aa7.25□□□□□ -1.25
SNHG1-215ENST00000540904 CX3CL1P78423 397 aa7.25□□□□□ -1.25
SNHG1-215ENST00000540904 NDPQ00604 133 aa7.25□□□□□ -1.25
SNHG1-215ENST00000540904 RNASE12Q5GAN4 147 aaKnown RBP7.25□□□□□ -1.25
SNHG1-215ENST00000540904 OR2B11Q5JQS5 317 aa7.25□□□□□ -1.25
SNHG1-215ENST00000540904 TEX38Q6PEX7 206 aa7.25□□□□□ -1.25
SNHG1-215ENST00000540904 COMMD1Q8N668 190 aa7.25□□□□□ -1.25
SNHG1-215ENST00000540904 OR5H2Q8NGV7 314 aa7.25□□□□□ -1.25
SNHG1-215ENST00000540904 DYNC2LI1Q8TCX1 351 aa7.25□□□□□ -1.25
SNHG1-215ENST00000540904 GPX8Q8TED1 209 aa7.25□□□□□ -1.25
SNHG1-215ENST00000540904 ABHD5Q8WTS1 349 aa7.25□□□□□ -1.25
SNHG1-215ENST00000540904 GIMAP1Q8WWP7 306 aa7.25□□□□□ -1.25
SNHG1-215ENST00000540904 DDB2Q92466 427 aa7.25□□□□□ -1.25
SNHG1-215ENST00000540904 GPHA2Q96T91 129 aa7.25□□□□□ -1.25
SNHG1-215ENST00000540904 BCL7BQ9BQE9 202 aa7.25□□□□□ -1.25
SNHG1-215ENST00000540904 DCUN1D5Q9BTE7 237 aa7.25□□□□□ -1.25
SNHG1-215ENST00000540904 SLC5A7Q9GZV3 580 aa7.25□□□□□ -1.25
SNHG1-215ENST00000540904 SCPEP1Q9HB40 452 aa7.25□□□□□ -1.25
SNHG1-215ENST00000540904 TPSG1Q9NRR2 321 aa7.25□□□□□ -1.25
SNHG1-215ENST00000540904 TAS2R8Q9NYW2 309 aa7.25□□□□□ -1.25
SNHG1-215ENST00000540904 EXTL2Q9UBQ6 330 aa7.25□□□□□ -1.25
SNHG1-215ENST00000540904 ANAPC10Q9UM13 185 aa7.25□□□□□ -1.25
SNHG1-215ENST00000540904 PRELID3BQ9Y3B1 194 aa7.25□□□□□ -1.25
SNHG1-215ENST00000540904 A3GALT2U3KPV4 340 aa7.25□□□□□ -1.25
SNHG1-215ENST00000540904 TET2Q6N021 2002 aaPredicted RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms