RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 C11orf42Q8N5U0 333 aa5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 KIR3DL3Q8N743 410 aa5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 LINC01356Q8N9X3 169 aa5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 MAPK1IP1LQ8NDC0 245 aa5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 ZNF439Q8NDP4 499 aa5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 BVESQ8NE79 360 aa5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 OR51H1Q8NH63 302 aa5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 COQ8AQ8NI60 647 aa5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 FAM216AQ8WUB2 273 aa5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 TCTEX1D2Q8WW35 142 aa5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 TNFRSF14Q92956 283 aa5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 TMEM230Q96A57 120 aa5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 GPHA2Q96T91 129 aa5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 TOLLIPQ9H0E2 274 aa5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 NAA60Q9H7X0 242 aa5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 SIRT7Q9NRC8 400 aa5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 SDHAF2Q9NX18 166 aa5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 PIPOXQ9P0Z9 390 aa5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 ZNF469Q96JG9 3925 aaPredicted RBP5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 NAV3Q8IVL0 2385 aa5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 A0A087X0M5 115 aa5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 SAA2-SAA4A0A096LPE2 208 aa5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 IGHV2-26A0A0B4J1V2 119 aa5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 TRAV20A0A0B4J274 112 aa5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 A0A0B4J293 547 aa5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 A0A1B0GX30 115 aa5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 A0A1W2PRD5 423 aa5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 A0A1W2PRF3 423 aa5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 A0A1W2PRM7 423 aa5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 C7orf66A4D0T2 115 aa5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 FAM25EA8MYX2 175 aa5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 SFT2D2O95562 160 aa5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 DUS4LO95620 317 aaKnown RBP5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 TGFAP01135 160 aa5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 ARG1P05089 322 aa5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 SERPINE2P07093 398 aa5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 OR5AC1P0C628 307 aa5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 SAA2P0DJI9 122 aaPredicted RBP5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 HOXA5P20719 270 aa5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 GZMKP49863 264 aa5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 DLX1P56177 255 aa5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 RND3P61587 244 aa5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 RRAS2P62070 204 aaPredicted RBP5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 DHODHQ02127 395 aa5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 RPL39P5Q59GN2 51 aa5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 DCAF12L2Q5VW00 463 aa5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 NCR3LG1Q68D85 454 aa5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 ZNF626Q68DY1 528 aa5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 LIN54Q6MZP7 749 aa5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 ZNF66Q6ZN08 573 aa5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 LDLRAD3Q86YD5 345 aa5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 ZNF695Q8IW36 515 aa5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 CADM3Q8N126 398 aa5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 CIARTQ8N365 385 aaPredicted RBP5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 LILRB2Q8N423 598 aa5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 Q8N7P7 452 aa5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 C8orf31Q8N9H6 132 aa5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 DRAXINQ8NBI3 349 aaPredicted RBP5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 ZNF596Q8TC21 504 aa5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 LHX4Q969G2 390 aa5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 TMEM186Q96B77 213 aa5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 AGMATQ9BSE5 352 aa5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 IFI27L2Q9H2X8 130 aa5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 LIN7CQ9NUP9 197 aaKnown RBP5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 HIF1ANQ9NWT6 349 aa5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 PRR13Q9NZ81 148 aa5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 POLR3KQ9Y2Y1 108 aaPredicted RBP5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 PRELID3BQ9Y3B1 194 aa5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 AMMECR1Q9Y4X0 333 aaPredicted RBP5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 INSIG2Q9Y5U4 225 aa5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 AUP1Q9Y679 476 aa5.41□□□□□ -1.54
CLTCL1-206ENST00000540896 MTORP42345 2549 aa5.4□□□□□ -1.54
CLTCL1-206ENST00000540896 PIGBOS1A0A0B4J2F0 54 aa5.4□□□□□ -1.54
CLTCL1-206ENST00000540896 C13orf42A0A1B0GVH6 325 aa5.4□□□□□ -1.54
CLTCL1-206ENST00000540896 HMX3A6NHT5 357 aa5.4□□□□□ -1.54
CLTCL1-206ENST00000540896 LEUTXA8MZ59 168 aa5.4□□□□□ -1.54
CLTCL1-206ENST00000540896 B3GALNT1O75752 331 aa5.4□□□□□ -1.54
CLTCL1-206ENST00000540896 CCNKO75909 580 aa5.4□□□□□ -1.54
CLTCL1-206ENST00000540896 IFNA21P01568 189 aa5.4□□□□□ -1.54
CLTCL1-206ENST00000540896 IGLV2-14P01704 120 aa5.4□□□□□ -1.54
CLTCL1-206ENST00000540896 GAPDHP04406 335 aaKnown RBP5.4□□□□□ -1.54
CLTCL1-206ENST00000540896 GATA3P23771 443 aa5.4□□□□□ -1.54
CLTCL1-206ENST00000540896 F2RP25116 425 aa5.4□□□□□ -1.54
CLTCL1-206ENST00000540896 HTR1DP28221 377 aa5.4□□□□□ -1.54
CLTCL1-206ENST00000540896 CEACAM3P40198 252 aa5.4□□□□□ -1.54
CLTCL1-206ENST00000540896 LPAR6P43657 344 aa5.4□□□□□ -1.54
CLTCL1-206ENST00000540896 REG1BP48304 166 aa5.4□□□□□ -1.54
CLTCL1-206ENST00000540896 THBS3P49746 956 aa5.4□□□□□ -1.54
CLTCL1-206ENST00000540896 RPL30P62888 115 aaKnown RBP5.4□□□□□ -1.54
CLTCL1-206ENST00000540896 SUPT4H1P63272 117 aaKnown RBP5.4□□□□□ -1.54
CLTCL1-206ENST00000540896 SRPXP78539 464 aa5.4□□□□□ -1.54
CLTCL1-206ENST00000540896 PAX2Q02962 417 aa5.4□□□□□ -1.54
CLTCL1-206ENST00000540896 PAX8Q06710 450 aa5.4□□□□□ -1.54
CLTCL1-206ENST00000540896 KLRD1Q13241 179 aa5.4□□□□□ -1.54
CLTCL1-206ENST00000540896 OR2B11Q5JQS5 317 aa5.4□□□□□ -1.54
CLTCL1-206ENST00000540896 TMEM268Q5VZI3 342 aa5.4□□□□□ -1.54
CLTCL1-206ENST00000540896 TGIF2LXQ8IUE1 241 aa5.4□□□□□ -1.54
CLTCL1-206ENST00000540896 SPAG16Q8N0X2 631 aa5.4□□□□□ -1.54
CLTCL1-206ENST00000540896 LGI3Q8N145 548 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms