RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 S1PR2O95136 353 aa11.44□□□□□ -0.58
RTN3-210ENST00000540798 IGHV3-43DP0DP04 118 aa11.44□□□□□ -0.58
RTN3-210ENST00000540798 ZNF616Q08AN1 781 aa11.44□□□□□ -0.58
RTN3-210ENST00000540798 EDDM3AQ14507 147 aa11.44□□□□□ -0.58
RTN3-210ENST00000540798 MORN2Q502X0 79 aa11.44□□□□□ -0.58
RTN3-210ENST00000540798 STUMQ69YW2 141 aa11.44□□□□□ -0.58
RTN3-210ENST00000540798 ZNF561Q8N587 486 aa11.44□□□□□ -0.58
RTN3-210ENST00000540798 C14orf79Q96F83 325 aa11.44□□□□□ -0.58
RTN3-210ENST00000540798 PARD6GQ9BYG4 376 aaPredicted RBP11.44□□□□□ -0.58
RTN3-210ENST00000540798 PSENENQ9NZ42 101 aa11.44□□□□□ -0.58
RTN3-210ENST00000540798 A0A1W2PPE3 182 aa11.44□□□□□ -0.58
RTN3-210ENST00000540798 CLDN14O95500 239 aa11.44□□□□□ -0.58
RTN3-210ENST00000540798 CLDN1O95832 211 aa11.44□□□□□ -0.58
RTN3-210ENST00000540798 IFNA4P05014 189 aa11.44□□□□□ -0.58
RTN3-210ENST00000540798 THBDP07204 575 aa11.44□□□□□ -0.58
RTN3-210ENST00000540798 FBP1P09467 338 aa11.44□□□□□ -0.58
RTN3-210ENST00000540798 RPP30P78346 268 aaKnown RBP11.44□□□□□ -0.58
RTN3-210ENST00000540798 TNFRSF9Q07011 255 aa11.44□□□□□ -0.58
RTN3-210ENST00000540798 TMEM267Q0VDI3 215 aaPredicted RBP11.44□□□□□ -0.58
RTN3-210ENST00000540798 SSX2Q16385 188 aa11.44□□□□□ -0.58
RTN3-210ENST00000540798 DHRS7BQ6IAN0 325 aaPredicted RBP11.44□□□□□ -0.58
RTN3-210ENST00000540798 SSX8Q7RTT4 187 aa11.44□□□□□ -0.58
RTN3-210ENST00000540798 LFNGQ8NES3 379 aa11.44□□□□□ -0.58
RTN3-210ENST00000540798 RFESDQ8TAC1 157 aa11.44□□□□□ -0.58
RTN3-210ENST00000540798 RNF7Q9UBF6 113 aa11.44□□□□□ -0.58
RTN3-210ENST00000540798 TANC2Q9HCD6 1990 aa11.44□□□□□ -0.58
RTN3-210ENST00000540798 ITGB1BP1O14713 200 aa11.44□□□□□ -0.58
RTN3-210ENST00000540798 RAB29O14966 203 aa11.44□□□□□ -0.58
RTN3-210ENST00000540798 PPIHO43447 177 aaKnown RBP11.44□□□□□ -0.58
RTN3-210ENST00000540798 PROP1O75360 226 aa11.44□□□□□ -0.58
RTN3-210ENST00000540798 PRH1P02810 166 aa11.44□□□□□ -0.58
RTN3-210ENST00000540798 H2AFB1P0C5Y9 115 aa11.44□□□□□ -0.58
RTN3-210ENST00000540798 SELENOVP59797 346 aa11.44□□□□□ -0.58
RTN3-210ENST00000540798 UBE2KP61086 200 aa11.44□□□□□ -0.58
RTN3-210ENST00000540798 ARL16Q0P5N6 197 aa11.44□□□□□ -0.58
RTN3-210ENST00000540798 GUK1Q16774 197 aa11.44□□□□□ -0.58
RTN3-210ENST00000540798 SPSB3Q6PJ21 355 aa11.44□□□□□ -0.58
RTN3-210ENST00000540798 TMEM108Q6UXF1 575 aa11.44□□□□□ -0.58
RTN3-210ENST00000540798 GFRALQ6UXV0 394 aa11.44□□□□□ -0.58
RTN3-210ENST00000540798 DPPA3Q6W0C5 159 aa11.44□□□□□ -0.58
RTN3-210ENST00000540798 ZNRF1Q8ND25 227 aa11.44□□□□□ -0.58
RTN3-210ENST00000540798 PSG11Q9UQ72 335 aa11.44□□□□□ -0.58
RTN3-210ENST00000540798 CADP27708 2225 aa11.43□□□□□ -0.58
RTN3-210ENST00000540798 H3BP45 60 aa11.43□□□□□ -0.58
RTN3-210ENST00000540798 TNFAIP6P98066 277 aaPredicted RBP11.43□□□□□ -0.58
RTN3-210ENST00000540798 BTNL3Q6UXE8 466 aa11.43□□□□□ -0.58
RTN3-210ENST00000540798 TMEM14EPQ6UXP3 125 aa11.43□□□□□ -0.58
RTN3-210ENST00000540798 ZNF525Q8N782 197 aa11.43□□□□□ -0.58
RTN3-210ENST00000540798 FAM213BQ8TBF2 198 aa11.43□□□□□ -0.58
RTN3-210ENST00000540798 TCTEX1D2Q8WW35 142 aa11.43□□□□□ -0.58
RTN3-210ENST00000540798 LAMP3Q9UQV4 416 aa11.43□□□□□ -0.58
RTN3-210ENST00000540798 LRRC30A6NM36 301 aa11.43□□□□□ -0.58
RTN3-210ENST00000540798 ZNF729A6NN14 1252 aaPredicted RBP11.43□□□□□ -0.58
RTN3-210ENST00000540798 CD55P08174 381 aa11.43□□□□□ -0.58
RTN3-210ENST00000540798 OR8U8P0C7N1 319 aa11.43□□□□□ -0.58
RTN3-210ENST00000540798 IAPPP10997 89 aa11.43□□□□□ -0.58
RTN3-210ENST00000540798 G6PCP35575 357 aa11.43□□□□□ -0.58
RTN3-210ENST00000540798 ZNF816Q0VGE8 651 aaPredicted RBP11.43□□□□□ -0.58
RTN3-210ENST00000540798 SNRNP40Q96DI7 357 aaKnown RBP11.43□□□□□ -0.58
RTN3-210ENST00000540798 ABHD14AQ9BUJ0 271 aa11.43□□□□□ -0.58
RTN3-210ENST00000540798 RBKSQ9H477 322 aa11.43□□□□□ -0.58
RTN3-210ENST00000540798 GAB2Q9UQC2 676 aa11.43□□□□□ -0.58
RTN3-210ENST00000540798 DMXL2Q8TDJ6 3036 aa11.43□□□□□ -0.58
RTN3-210ENST00000540798 DPRXA6NFQ7 191 aa11.42□□□□□ -0.58
RTN3-210ENST00000540798 DUTP33316 252 aaKnown RBP11.42□□□□□ -0.58
RTN3-210ENST00000540798 NPBWR1P48145 328 aa11.42□□□□□ -0.58
RTN3-210ENST00000540798 RUNX1Q01196 453 aa11.42□□□□□ -0.58
RTN3-210ENST00000540798 PEA15Q15121 130 aa11.42□□□□□ -0.58
RTN3-210ENST00000540798 AARDQ4LEZ3 155 aa11.42□□□□□ -0.58
RTN3-210ENST00000540798 TEX36Q5VZQ5 186 aa11.42□□□□□ -0.58
RTN3-210ENST00000540798 UNKLQ9H9P5 680 aaKnown RBP11.42□□□□□ -0.58
RTN3-210ENST00000540798 OR6C3Q9NZP0 311 aa11.42□□□□□ -0.58
RTN3-210ENST00000540798 MEX3AA1L020 520 aaKnown RBP11.42□□□□□ -0.58
RTN3-210ENST00000540798 CXorf65A6NEN9 183 aa11.42□□□□□ -0.58
RTN3-210ENST00000540798 DEFB108AA8MXU0 73 aa11.42□□□□□ -0.58
RTN3-210ENST00000540798 NFYBP25208 207 aa11.42□□□□□ -0.58
RTN3-210ENST00000540798 C17orf58Q2M2W7 97 aa11.42□□□□□ -0.58
RTN3-210ENST00000540798 GAFA1Q96PS6 74 aa11.42□□□□□ -0.58
RTN3-210ENST00000540798 MSRB2Q9Y3D2 182 aa11.42□□□□□ -0.58
RTN3-210ENST00000540798 USF3Q68DE3 2245 aa11.42□□□□□ -0.58
RTN3-210ENST00000540798 KRASP01116 189 aa11.42□□□□□ -0.58
RTN3-210ENST00000540798 CD300LFQ8TDQ1 290 aa11.42□□□□□ -0.58
RTN3-210ENST00000540798 C14orf144Q96I85 54 aa11.42□□□□□ -0.58
RTN3-210ENST00000540798 IFI27L2Q9H2X8 130 aa11.42□□□□□ -0.58
RTN3-210ENST00000540798 SMDT1Q9H4I9 107 aa11.42□□□□□ -0.58
RTN3-210ENST00000540798 LINC00574Q9H8X3 128 aa11.42□□□□□ -0.58
RTN3-210ENST00000540798 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.42□□□□□ -0.58
RTN3-210ENST00000540798 CALYQ9NYX4 217 aa11.42□□□□□ -0.58
RTN3-210ENST00000540798 KPTNQ9Y664 436 aa11.42□□□□□ -0.58
RTN3-210ENST00000540798 BTBD17A6NE02 478 aa11.41□□□□□ -0.58
RTN3-210ENST00000540798 FAM201AQ5SY85 155 aa11.41□□□□□ -0.58
RTN3-210ENST00000540798 AVPI1Q5T686 147 aa11.41□□□□□ -0.58
RTN3-210ENST00000540798 PSMG3Q9BT73 122 aaPredicted RBP11.41□□□□□ -0.58
RTN3-210ENST00000540798 FAM234AQ9H0X4 552 aa11.41□□□□□ -0.58
RTN3-210ENST00000540798 METTL15P1P0C7V9 234 aa11.41□□□□□ -0.58
RTN3-210ENST00000540798 TNFSF4P23510 183 aa11.41□□□□□ -0.58
RTN3-210ENST00000540798 ZNF134P52741 427 aa11.41□□□□□ -0.58
RTN3-210ENST00000540798 FABP9Q0Z7S8 132 aa11.41□□□□□ -0.58
RTN3-210ENST00000540798 ADIPOQQ15848 244 aa11.41□□□□□ -0.58
RTN3-210ENST00000540798 LRRC75BQ2VPJ9 315 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms