RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 LYZL2Q7Z4W2 148 aa11.66□□□□□ -0.54
CYB561A3-216ENST00000540755 ODF3L1Q8IXM7 274 aa11.66□□□□□ -0.54
CYB561A3-216ENST00000540755 LINC00311Q8N616 119 aa11.66□□□□□ -0.54
CYB561A3-216ENST00000540755 SLC35G3Q8N808 338 aa11.66□□□□□ -0.54
CYB561A3-216ENST00000540755 THAP6Q8TBB0 222 aa11.66□□□□□ -0.54
CYB561A3-216ENST00000540755 PLSCR3Q9NRY6 295 aa11.66□□□□□ -0.54
CYB561A3-216ENST00000540755 A8MXK9 166 aa11.65□□□□□ -0.54
CYB561A3-216ENST00000540755 PROP1O75360 226 aa11.65□□□□□ -0.54
CYB561A3-216ENST00000540755 OR2F2O95006 317 aa11.65□□□□□ -0.54
CYB561A3-216ENST00000540755 IFNA7P01567 189 aa11.65□□□□□ -0.54
CYB561A3-216ENST00000540755 FOSL1P15407 271 aa11.65□□□□□ -0.54
CYB561A3-216ENST00000540755 PSMB6P28072 239 aa11.65□□□□□ -0.54
CYB561A3-216ENST00000540755 S100A11P31949 105 aa11.65□□□□□ -0.54
CYB561A3-216ENST00000540755 GNG10P50151 68 aa11.65□□□□□ -0.54
CYB561A3-216ENST00000540755 RPL30P62888 115 aaKnown RBP11.65□□□□□ -0.54
CYB561A3-216ENST00000540755 IL15RAQ13261 267 aa11.65□□□□□ -0.54
CYB561A3-216ENST00000540755 OR2F1Q13607 317 aa11.65□□□□□ -0.54
CYB561A3-216ENST00000540755 ZNF345Q14585 488 aa11.65□□□□□ -0.54
CYB561A3-216ENST00000540755 ZNF585BQ52M93 769 aa11.65□□□□□ -0.54
CYB561A3-216ENST00000540755 BTNL3Q6UXE8 466 aa11.65□□□□□ -0.54
CYB561A3-216ENST00000540755 LYG1Q8N1E2 194 aa11.65□□□□□ -0.54
CYB561A3-216ENST00000540755 PPP1R1CQ8WVI7 109 aa11.65□□□□□ -0.54
CYB561A3-216ENST00000540755 FAM168AQ92567 244 aa11.65□□□□□ -0.54
CYB561A3-216ENST00000540755 PIMREGQ9BSJ6 248 aa11.65□□□□□ -0.54
CYB561A3-216ENST00000540755 GSX2Q9BZM3 304 aa11.65□□□□□ -0.54
CYB561A3-216ENST00000540755 BOLA1Q9Y3E2 137 aa11.65□□□□□ -0.54
CYB561A3-216ENST00000540755 LOC105371242A0A075B767 164 aa11.64□□□□□ -0.55
CYB561A3-216ENST00000540755 SAA2-SAA4A0A096LPE2 208 aa11.64□□□□□ -0.55
CYB561A3-216ENST00000540755 TRAV14DV4A0A0A6YYC5 116 aa11.64□□□□□ -0.55
CYB561A3-216ENST00000540755 hCG_1809904A0A1W2PP81 198 aa11.64□□□□□ -0.55
CYB561A3-216ENST00000540755 A0A1W2PPE2 198 aa11.64□□□□□ -0.55
CYB561A3-216ENST00000540755 A0A1W2PPE3 182 aa11.64□□□□□ -0.55
CYB561A3-216ENST00000540755 A0A1W2PR64 198 aa11.64□□□□□ -0.55
CYB561A3-216ENST00000540755 A0A1W2PRV1 198 aa11.64□□□□□ -0.55
CYB561A3-216ENST00000540755 SAA2P0DJI9 122 aaPredicted RBP11.64□□□□□ -0.55
CYB561A3-216ENST00000540755 ZNF16P17020 682 aaPredicted RBP11.64□□□□□ -0.55
CYB561A3-216ENST00000540755 VDAC1P21796 283 aa11.64□□□□□ -0.55
CYB561A3-216ENST00000540755 IAH1Q2TAA2 248 aaPredicted RBP11.64□□□□□ -0.55
CYB561A3-216ENST00000540755 RPL39P5Q59GN2 51 aa11.64□□□□□ -0.55
CYB561A3-216ENST00000540755 CLEC2AQ6UVW9 174 aa11.64□□□□□ -0.55
CYB561A3-216ENST00000540755 ZNF546Q86UE3 836 aa11.64□□□□□ -0.55
CYB561A3-216ENST00000540755 C10orf105Q8TEF2 133 aa11.64□□□□□ -0.55
CYB561A3-216ENST00000540755 TCTEX1D2Q8WW35 142 aa11.64□□□□□ -0.55
CYB561A3-216ENST00000540755 SMR3AQ99954 134 aa11.64□□□□□ -0.55
CYB561A3-216ENST00000540755 ZNF251Q9BRH9 671 aa11.64□□□□□ -0.55
CYB561A3-216ENST00000540755 TMEM133Q9H2Q1 129 aa11.64□□□□□ -0.55
CYB561A3-216ENST00000540755 CSPG4Q6UVK1 2322 aa11.64□□□□□ -0.55
CYB561A3-216ENST00000540755 LINC00473A8K010 186 aa11.63□□□□□ -0.55
CYB561A3-216ENST00000540755 KIAA1324LA8MWY0 1029 aaPredicted RBP11.63□□□□□ -0.55
CYB561A3-216ENST00000540755 VWC2LB2RUY7 222 aa11.63□□□□□ -0.55
CYB561A3-216ENST00000540755 J3QR06 171 aa11.63□□□□□ -0.55
CYB561A3-216ENST00000540755 M0R1W7 72 aa11.63□□□□□ -0.55
CYB561A3-216ENST00000540755 M0R1X1 148 aa11.63□□□□□ -0.55
CYB561A3-216ENST00000540755 LMO4P61968 165 aa11.63□□□□□ -0.55
CYB561A3-216ENST00000540755 OPCMLQ14982 345 aa11.63□□□□□ -0.55
CYB561A3-216ENST00000540755 FAM71F2Q6NXP2 309 aa11.63□□□□□ -0.55
CYB561A3-216ENST00000540755 TEX261Q6UWH6 196 aa11.63□□□□□ -0.55
CYB561A3-216ENST00000540755 OR9G1Q8NH87 305 aa11.63□□□□□ -0.55
CYB561A3-216ENST00000540755 CLDND2Q8NHS1 167 aa11.63□□□□□ -0.55
CYB561A3-216ENST00000540755 CD300LFQ8TDQ1 290 aa11.63□□□□□ -0.55
CYB561A3-216ENST00000540755 TNFRSF14Q92956 283 aa11.63□□□□□ -0.55
CYB561A3-216ENST00000540755 ADTRPQ96IZ2 230 aa11.63□□□□□ -0.55
CYB561A3-216ENST00000540755 S1PR3Q99500 378 aa11.63□□□□□ -0.55
CYB561A3-216ENST00000540755 SPIN2AQ99865 258 aa11.63□□□□□ -0.55
CYB561A3-216ENST00000540755 SPIN2BQ9BPZ2 258 aa11.63□□□□□ -0.55
CYB561A3-216ENST00000540755 BEX4Q9NWD9 120 aaPredicted RBP11.63□□□□□ -0.55
CYB561A3-216ENST00000540755 U3KQ87 197 aa11.63□□□□□ -0.55
CYB561A3-216ENST00000540755 IGKV1-39P01597 117 aa11.63□□□□□ -0.55
CYB561A3-216ENST00000540755 IGKV1D-39P04432 117 aa11.63□□□□□ -0.55
CYB561A3-216ENST00000540755 LYL1P12980 280 aa11.63□□□□□ -0.55
CYB561A3-216ENST00000540755 KIR2DS2P43631 304 aa11.63□□□□□ -0.55
CYB561A3-216ENST00000540755 THBS3P49746 956 aa11.63□□□□□ -0.55
CYB561A3-216ENST00000540755 DSCR9P59020 149 aa11.63□□□□□ -0.55
CYB561A3-216ENST00000540755 BRWD1-AS2P59051 145 aa11.63□□□□□ -0.55
CYB561A3-216ENST00000540755 NMSQ5H8A3 153 aa11.63□□□□□ -0.55
CYB561A3-216ENST00000540755 C1orf229Q6ZS94 237 aaPredicted RBP11.63□□□□□ -0.55
CYB561A3-216ENST00000540755 ZNF833PQ6ZTB9 187 aa11.63□□□□□ -0.55
CYB561A3-216ENST00000540755 ACOT7LQ6ZUV0 252 aa11.63□□□□□ -0.55
CYB561A3-216ENST00000540755 SPAG16Q8N0X2 631 aa11.63□□□□□ -0.55
CYB561A3-216ENST00000540755 ABHD12Q8N2K0 398 aa11.63□□□□□ -0.55
CYB561A3-216ENST00000540755 KIR3DL3Q8N743 410 aa11.63□□□□□ -0.55
CYB561A3-216ENST00000540755 LSM10Q969L4 123 aaKnown RBP11.63□□□□□ -0.55
CYB561A3-216ENST00000540755 MFFQ9GZY8 342 aa11.63□□□□□ -0.55
CYB561A3-216ENST00000540755 FXYD6-FXYD2A0A087WZ82 144 aa11.62□□□□□ -0.55
CYB561A3-216ENST00000540755 RBFOX2O43251 390 aaKnown RBP eCLIP11.62□□□□□ -0.552e-7■□□□□ 8.3
CYB561A3-216ENST00000540755 ENSAO43768 121 aaKnown RBP11.62□□□□□ -0.55
CYB561A3-216ENST00000540755 RAMP3O60896 148 aa11.62□□□□□ -0.55
CYB561A3-216ENST00000540755 ATG12O94817 140 aa11.62□□□□□ -0.55
CYB561A3-216ENST00000540755 MPC2O95563 127 aa11.62□□□□□ -0.55
CYB561A3-216ENST00000540755 SLC25A6P12236 298 aa11.62□□□□□ -0.55
CYB561A3-216ENST00000540755 NUP62P37198 522 aaPredicted RBP11.62□□□□□ -0.55
CYB561A3-216ENST00000540755 LPAR6P43657 344 aa11.62□□□□□ -0.55
CYB561A3-216ENST00000540755 LRRC37A5PQ49AS3 106 aa11.62□□□□□ -0.55
CYB561A3-216ENST00000540755 NCR3LG1Q68D85 454 aa11.62□□□□□ -0.55
CYB561A3-216ENST00000540755 INO80EQ8NBZ0 244 aaPredicted RBP11.62□□□□□ -0.55
CYB561A3-216ENST00000540755 OR8H1Q8NGG4 311 aa11.62□□□□□ -0.55
CYB561A3-216ENST00000540755 DDB2Q92466 427 aa11.62□□□□□ -0.55
CYB561A3-216ENST00000540755 PERPQ96FX8 193 aa11.62□□□□□ -0.55
CYB561A3-216ENST00000540755 GSKIPQ9P0R6 139 aa11.62□□□□□ -0.55
CYB561A3-216ENST00000540755 ONECUT1Q9UBC0 465 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms