RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 MYOZ3Q8TDC0 251 aa8.13□□□□□ -1.11
CDCA3-208ENST00000540683 RAX2Q96IS3 184 aa8.13□□□□□ -1.11
CDCA3-208ENST00000540683 ABHD14BQ96IU4 210 aa8.13□□□□□ -1.11
CDCA3-208ENST00000540683 AIFM2Q9BRQ8 373 aa8.13□□□□□ -1.11
CDCA3-208ENST00000540683 ATG5Q9H1Y0 275 aa8.13□□□□□ -1.11
CDCA3-208ENST00000540683 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.13□□□□□ -1.11
CDCA3-208ENST00000540683 RDH8Q9NYR8 311 aa8.13□□□□□ -1.11
CDCA3-208ENST00000540683 METTL1Q9UBP6 276 aaKnown RBP8.13□□□□□ -1.11
CDCA3-208ENST00000540683 TRBV6-7A0A0A0MS04 114 aa8.12□□□□□ -1.11
CDCA3-208ENST00000540683 A0A0A6YYH2 397 aa8.12□□□□□ -1.11
CDCA3-208ENST00000540683 A6NJ64 397 aa8.12□□□□□ -1.11
CDCA3-208ENST00000540683 LINC01548A6NM66 108 aa8.12□□□□□ -1.11
CDCA3-208ENST00000540683 SEC14L6B5MCN3 397 aa8.12□□□□□ -1.11
CDCA3-208ENST00000540683 M0R1X1 148 aa8.12□□□□□ -1.11
CDCA3-208ENST00000540683 BET1O15155 118 aa8.12□□□□□ -1.11
CDCA3-208ENST00000540683 ACTL6BO94805 426 aa8.12□□□□□ -1.11
CDCA3-208ENST00000540683 SCTP09683 121 aa8.12□□□□□ -1.11
CDCA3-208ENST00000540683 CD36P16671 472 aa8.12□□□□□ -1.11
CDCA3-208ENST00000540683 PPIFP30405 207 aaKnown RBP8.12□□□□□ -1.11
CDCA3-208ENST00000540683 CLDN12P56749 244 aa8.12□□□□□ -1.11
CDCA3-208ENST00000540683 CX3CL1P78423 397 aa8.12□□□□□ -1.11
CDCA3-208ENST00000540683 FHL3Q13643 280 aa8.12□□□□□ -1.11
CDCA3-208ENST00000540683 ECSCRQ19T08 205 aa8.12□□□□□ -1.11
CDCA3-208ENST00000540683 VMA21Q3ZAQ7 101 aa8.12□□□□□ -1.11
CDCA3-208ENST00000540683 RPL39P5Q59GN2 51 aa8.12□□□□□ -1.11
CDCA3-208ENST00000540683 ZNF491Q8N8L2 437 aa8.12□□□□□ -1.11
CDCA3-208ENST00000540683 ARPC1AQ92747 370 aa8.12□□□□□ -1.11
CDCA3-208ENST00000540683 BORCS5Q969J3 196 aa8.12□□□□□ -1.11
CDCA3-208ENST00000540683 CABLES2Q9BTV7 478 aa8.12□□□□□ -1.11
CDCA3-208ENST00000540683 ELOVL1Q9BW60 279 aa8.12□□□□□ -1.11
CDCA3-208ENST00000540683 SLC35D1Q9NTN3 355 aa8.12□□□□□ -1.11
CDCA3-208ENST00000540683 MRPS7Q9Y2R9 242 aaKnown RBP8.12□□□□□ -1.11
CDCA3-208ENST00000540683 PRELID3BQ9Y3B1 194 aa8.12□□□□□ -1.11
CDCA3-208ENST00000540683 ETV7Q9Y603 341 aa8.12□□□□□ -1.11
CDCA3-208ENST00000540683 A0A1W2PN81 502 aa8.11□□□□□ -1.11
CDCA3-208ENST00000540683 LINC01619G3V211 115 aa8.11□□□□□ -1.11
CDCA3-208ENST00000540683 MFNGO00587 321 aa8.11□□□□□ -1.11
CDCA3-208ENST00000540683 PRB2P02812 416 aaPredicted RBP8.11□□□□□ -1.11
CDCA3-208ENST00000540683 AADACP22760 399 aa8.11□□□□□ -1.11
CDCA3-208ENST00000540683 CHRNA7P36544 502 aa8.11□□□□□ -1.11
CDCA3-208ENST00000540683 GNG2P59768 71 aa8.11□□□□□ -1.11
CDCA3-208ENST00000540683 ARPC4P59998 168 aa8.11□□□□□ -1.11
CDCA3-208ENST00000540683 PLAC9Q5JTB6 97 aa8.11□□□□□ -1.11
CDCA3-208ENST00000540683 C22orf42Q6IC83 251 aa8.11□□□□□ -1.11
CDCA3-208ENST00000540683 FAM53AQ6NSI3 398 aaPredicted RBP8.11□□□□□ -1.11
CDCA3-208ENST00000540683 UNQ5815/PRO19632Q6UWF5 114 aa8.11□□□□□ -1.11
CDCA3-208ENST00000540683 OSR1Q8TAX0 266 aaPredicted RBP8.11□□□□□ -1.11
CDCA3-208ENST00000540683 GFI1Q99684 422 aa8.11□□□□□ -1.11
CDCA3-208ENST00000540683 OR2D2Q9H210 308 aa8.11□□□□□ -1.11
CDCA3-208ENST00000540683 KCNK15Q9H427 330 aa8.11□□□□□ -1.11
CDCA3-208ENST00000540683 FBXL15Q9H469 300 aa8.11□□□□□ -1.11
CDCA3-208ENST00000540683 OR1A1Q9P1Q5 309 aa8.11□□□□□ -1.11
CDCA3-208ENST00000540683 WSB1Q9Y6I7 421 aa8.11□□□□□ -1.11
CDCA3-208ENST00000540683 A0A075B6Q4 140 aa8.1□□□□□ -1.11
CDCA3-208ENST00000540683 C13orf42A0A1B0GVH6 325 aa8.1□□□□□ -1.11
CDCA3-208ENST00000540683 I3L521 148 aa8.1□□□□□ -1.11
CDCA3-208ENST00000540683 RAB27BO00194 218 aa8.1□□□□□ -1.11
CDCA3-208ENST00000540683 OVOL1O14753 267 aa8.1□□□□□ -1.11
CDCA3-208ENST00000540683 SHOXO15266 292 aa8.1□□□□□ -1.11
CDCA3-208ENST00000540683 BRI3O95415 125 aa8.1□□□□□ -1.11
CDCA3-208ENST00000540683 LGALS1P09382 135 aaKnown RBP8.1□□□□□ -1.11
CDCA3-208ENST00000540683 OR8U9P0C7N5 309 aa8.1□□□□□ -1.11
CDCA3-208ENST00000540683 GNB3P16520 340 aa8.1□□□□□ -1.11
CDCA3-208ENST00000540683 ZP3P21754 424 aa8.1□□□□□ -1.11
CDCA3-208ENST00000540683 HOXD3P31249 432 aaPredicted RBP8.1□□□□□ -1.11
CDCA3-208ENST00000540683 LUMP51884 338 aaPredicted RBP8.1□□□□□ -1.11
CDCA3-208ENST00000540683 FXYD3Q14802 87 aa8.1□□□□□ -1.11
CDCA3-208ENST00000540683 PSG5Q15238 335 aa8.1□□□□□ -1.11
CDCA3-208ENST00000540683 TATDN3Q17R31 274 aa8.1□□□□□ -1.11
CDCA3-208ENST00000540683 ZNF260Q3ZCT1 412 aa8.1□□□□□ -1.11
CDCA3-208ENST00000540683 HACD4Q5VWC8 232 aa8.1□□□□□ -1.11
CDCA3-208ENST00000540683 ZNF773Q6PK81 442 aa8.1□□□□□ -1.11
CDCA3-208ENST00000540683 SPARTQ8N0X7 666 aa8.1□□□□□ -1.11
CDCA3-208ENST00000540683 TEX45Q8NA69 505 aa8.1□□□□□ -1.11
CDCA3-208ENST00000540683 OR6Q1Q8NGQ2 317 aa8.1□□□□□ -1.11
CDCA3-208ENST00000540683 VSTM2AQ8TAG5 236 aa8.1□□□□□ -1.11
CDCA3-208ENST00000540683 HARBI1Q96MB7 349 aa8.1□□□□□ -1.11
CDCA3-208ENST00000540683 B9D2Q9BPU9 175 aa8.1□□□□□ -1.11
CDCA3-208ENST00000540683 HDHD3Q9BSH5 251 aaPredicted RBP8.1□□□□□ -1.11
CDCA3-208ENST00000540683 DIABLOQ9NR28 239 aa8.1□□□□□ -1.11
CDCA3-208ENST00000540683 TXNL4BQ9NX01 149 aaKnown RBP8.1□□□□□ -1.11
CDCA3-208ENST00000540683 NUBP2Q9Y5Y2 271 aa8.1□□□□□ -1.11
CDCA3-208ENST00000540683 PRKDCP78527 4128 aaKnown RBP8.1□□□□□ -1.11
CDCA3-208ENST00000540683 G3V318 75 aa8.09□□□□□ -1.11
CDCA3-208ENST00000540683 K7EIL1 84 aa8.09□□□□□ -1.11
CDCA3-208ENST00000540683 CA2P00918 260 aa8.09□□□□□ -1.11
CDCA3-208ENST00000540683 HSPB1P04792 205 aaKnown RBP8.09□□□□□ -1.11
CDCA3-208ENST00000540683 CNTFRP26992 372 aa8.09□□□□□ -1.11
CDCA3-208ENST00000540683 CBX5P45973 191 aa8.09□□□□□ -1.11
CDCA3-208ENST00000540683 TPPP2P59282 170 aa8.09□□□□□ -1.11
CDCA3-208ENST00000540683 CDNFQ49AH0 187 aa8.09□□□□□ -1.11
CDCA3-208ENST00000540683 KCTD21Q4G0X4 260 aa8.09□□□□□ -1.11
CDCA3-208ENST00000540683 TMEM177Q53S58 311 aa8.09□□□□□ -1.11
CDCA3-208ENST00000540683 VAX1Q5SQQ9 334 aa8.09□□□□□ -1.11
CDCA3-208ENST00000540683 SFXN4Q6P4A7 337 aa8.09□□□□□ -1.11
CDCA3-208ENST00000540683 CNIH2Q6PI25 160 aa8.09□□□□□ -1.11
CDCA3-208ENST00000540683 GLDNQ6ZMI3 551 aaPredicted RBP8.09□□□□□ -1.11
CDCA3-208ENST00000540683 SLC25A42Q86VD7 318 aa8.09□□□□□ -1.11
CDCA3-208ENST00000540683 ZNF645Q8N7E2 425 aa8.09□□□□□ -1.11
CDCA3-208ENST00000540683 ZNF383Q8NA42 475 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms