RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 PFDN2Q9UHV9 154 aa18.47■□□□□ 0.55
HOMER3-204ENST00000539827 CACNA1BQ00975 2339 aa18.47■□□□□ 0.55
HOMER3-204ENST00000539827 ZFYVE26Q68DK2 2539 aa18.46■□□□□ 0.55
HOMER3-204ENST00000539827 NDUFA2O43678 99 aa18.46■□□□□ 0.55
HOMER3-204ENST00000539827 FCGR3BO75015 233 aa18.46■□□□□ 0.55
HOMER3-204ENST00000539827 LYG1Q8N1E2 194 aa18.46■□□□□ 0.55
HOMER3-204ENST00000539827 TMED6Q8WW62 240 aa18.46■□□□□ 0.55
HOMER3-204ENST00000539827 PAX9P55771 341 aa18.46■□□□□ 0.55
HOMER3-204ENST00000539827 LRRC20Q8TCA0 184 aa18.46■□□□□ 0.55
HOMER3-204ENST00000539827 FAM212BQ9NTI7 297 aaPredicted RBP18.46■□□□□ 0.55
HOMER3-204ENST00000539827 SAA2-SAA4A0A096LPE2 208 aa18.45■□□□□ 0.54
HOMER3-204ENST00000539827 TEX46H3BTG2 121 aa18.45■□□□□ 0.54
HOMER3-204ENST00000539827 SAA2P0DJI9 122 aaPredicted RBP18.45■□□□□ 0.54
HOMER3-204ENST00000539827 MMP9P14780 707 aa18.45■□□□□ 0.54
HOMER3-204ENST00000539827 TMEM30BQ3MIR4 351 aa18.45■□□□□ 0.54
HOMER3-204ENST00000539827 ODF3L1Q8IXM7 274 aa18.45■□□□□ 0.54
HOMER3-204ENST00000539827 LYRM2Q9NU23 88 aaPredicted RBP18.45■□□□□ 0.54
HOMER3-204ENST00000539827 ZNRD1Q9P1U0 126 aa18.45■□□□□ 0.54
HOMER3-204ENST00000539827 GAB2Q9UQC2 676 aa18.45■□□□□ 0.54
HOMER3-204ENST00000539827 CRYZL1O95825 349 aa18.44■□□□□ 0.54
HOMER3-204ENST00000539827 IGHV2-70P01814 119 aa18.44■□□□□ 0.54
HOMER3-204ENST00000539827 DANCRP0C864 163 aa18.44■□□□□ 0.54
HOMER3-204ENST00000539827 P0C879 139 aa18.44■□□□□ 0.54
HOMER3-204ENST00000539827 IAPPP10997 89 aa18.44■□□□□ 0.54
HOMER3-204ENST00000539827 MRPS11P82912 194 aaKnown RBP18.44■□□□□ 0.54
HOMER3-204ENST00000539827 TMEM252Q8N6L7 170 aa18.44■□□□□ 0.54
HOMER3-204ENST00000539827 NUP50Q9UKX7 468 aa18.44■□□□□ 0.54
HOMER3-204ENST00000539827 ATG12O94817 140 aa18.44■□□□□ 0.54
HOMER3-204ENST00000539827 EIF5AP63241 154 aaKnown RBP18.44■□□□□ 0.54
HOMER3-204ENST00000539827 ZNF295-AS1Q8N0V1 137 aa18.44■□□□□ 0.54
HOMER3-204ENST00000539827 RAB29O14966 203 aa18.43■□□□□ 0.54
HOMER3-204ENST00000539827 OR10A7Q8NGE5 316 aa18.43■□□□□ 0.54
HOMER3-204ENST00000539827 CD300LFQ8TDQ1 290 aa18.43■□□□□ 0.54
HOMER3-204ENST00000539827 ZNF251Q9BRH9 671 aa18.43■□□□□ 0.54
HOMER3-204ENST00000539827 SLC25A31Q9H0C2 315 aa18.43■□□□□ 0.54
HOMER3-204ENST00000539827 LPAR3Q9UBY5 353 aa18.43■□□□□ 0.54
HOMER3-204ENST00000539827 LAMP3Q9UQV4 416 aa18.43■□□□□ 0.54
HOMER3-204ENST00000539827 SPTBN1Q01082 2364 aaKnown RBP18.43■□□□□ 0.54
HOMER3-204ENST00000539827 H3BP45 60 aa18.42■□□□□ 0.54
HOMER3-204ENST00000539827 SYNGR2O43760 224 aa18.42■□□□□ 0.54
HOMER3-204ENST00000539827 JTBO76095 146 aa18.42■□□□□ 0.54
HOMER3-204ENST00000539827 GAPDHP04406 335 aaKnown RBP18.42■□□□□ 0.54
HOMER3-204ENST00000539827 DAOP14920 347 aa18.42■□□□□ 0.54
HOMER3-204ENST00000539827 MIDNQ504T8 468 aa18.42■□□□□ 0.54
HOMER3-204ENST00000539827 HEPN1Q6WQI6 88 aa18.42■□□□□ 0.54
HOMER3-204ENST00000539827 SLC25A48Q6ZT89 311 aaKnown RBP18.42■□□□□ 0.54
HOMER3-204ENST00000539827 H2BFWTQ7Z2G1 175 aa18.42■□□□□ 0.54
HOMER3-204ENST00000539827 R3HDM4Q96D70 268 aa18.42■□□□□ 0.54
HOMER3-204ENST00000539827 S1PR3Q99500 378 aa18.42■□□□□ 0.54
HOMER3-204ENST00000539827 MFSD2BA6NFX1 497 aa18.42■□□□□ 0.54
HOMER3-204ENST00000539827 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.42■□□□□ 0.54
HOMER3-204ENST00000539827 UBTD1Q9HAC8 227 aa18.42■□□□□ 0.54
HOMER3-204ENST00000539827 PRELID3BQ9Y3B1 194 aa18.42■□□□□ 0.54
HOMER3-204ENST00000539827 TOR1AO14656 332 aa18.41■□□□□ 0.54
HOMER3-204ENST00000539827 FBXO24O75426 580 aa18.41■□□□□ 0.54
HOMER3-204ENST00000539827 CST7O76096 145 aa18.41■□□□□ 0.54
HOMER3-204ENST00000539827 RPL23AP62750 156 aaKnown RBP18.41■□□□□ 0.54
HOMER3-204ENST00000539827 DTX2Q86UW9 622 aa18.41■□□□□ 0.54
HOMER3-204ENST00000539827 RAB40CQ96S21 281 aa18.41■□□□□ 0.54
HOMER3-204ENST00000539827 COA4Q9NYJ1 87 aa18.41■□□□□ 0.54
HOMER3-204ENST00000539827 HPRT1P00492 218 aa18.41■□□□□ 0.54
HOMER3-204ENST00000539827 DLX6P56179 175 aa18.41■□□□□ 0.54
HOMER3-204ENST00000539827 CLINT1Q14677 625 aa18.41■□□□□ 0.54
HOMER3-204ENST00000539827 DDB2Q92466 427 aa18.41■□□□□ 0.54
HOMER3-204ENST00000539827 RBMXL1Q96E39 390 aaKnown RBP18.41■□□□□ 0.54
HOMER3-204ENST00000539827 BORCS7-ASMTA0A0B4J1R7 106 aa18.4■□□□□ 0.54
HOMER3-204ENST00000539827 MARCH11A6NNE9 402 aa18.4■□□□□ 0.54
HOMER3-204ENST00000539827 PRB1P04280 392 aa18.4■□□□□ 0.54
HOMER3-204ENST00000539827 ZP3P21754 424 aa18.4■□□□□ 0.54
HOMER3-204ENST00000539827 TMEM155Q4W5P6 130 aa18.4■□□□□ 0.54
HOMER3-204ENST00000539827 SSX9Q7RTT3 188 aa18.4■□□□□ 0.54
HOMER3-204ENST00000539827 NEU4Q8WWR8 484 aaPredicted RBP18.4■□□□□ 0.54
HOMER3-204ENST00000539827 REG4Q9BYZ8 158 aa18.4■□□□□ 0.54
HOMER3-204ENST00000539827 RBKSQ9H477 322 aa18.4■□□□□ 0.54
HOMER3-204ENST00000539827 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.4■□□□□ 0.54
HOMER3-204ENST00000539827 PSENENQ9NZ42 101 aa18.4■□□□□ 0.54
HOMER3-204ENST00000539827 THBS3P49746 956 aa18.39■□□□□ 0.53
HOMER3-204ENST00000539827 DYNLT3P51808 116 aa18.39■□□□□ 0.53
HOMER3-204ENST00000539827 TMEM267Q0VDI3 215 aaPredicted RBP18.39■□□□□ 0.53
HOMER3-204ENST00000539827 ZNF841Q6ZN19 808 aa18.39■□□□□ 0.53
HOMER3-204ENST00000539827 TMEM217Q8N7C4 229 aa18.39■□□□□ 0.53
HOMER3-204ENST00000539827 ZNF383Q8NA42 475 aa18.39■□□□□ 0.53
HOMER3-204ENST00000539827 UBAC2Q8NBM4 344 aa18.39■□□□□ 0.53
HOMER3-204ENST00000539827 PLA2G2EQ9NZK7 142 aa18.39■□□□□ 0.53
HOMER3-204ENST00000539827 IGSF10Q6WRI0 2623 aa18.39■□□□□ 0.53
HOMER3-204ENST00000539827 FGF16O43320 207 aa18.39■□□□□ 0.53
HOMER3-204ENST00000539827 PPIHO43447 177 aaKnown RBP18.39■□□□□ 0.53
HOMER3-204ENST00000539827 OR9G9P0C7N8 305 aa18.39■□□□□ 0.53
HOMER3-204ENST00000539827 M6PRP20645 277 aa18.39■□□□□ 0.53
HOMER3-204ENST00000539827 CDKN1AP38936 164 aa18.39■□□□□ 0.53
HOMER3-204ENST00000539827 KIR2DS2P43631 304 aa18.39■□□□□ 0.53
HOMER3-204ENST00000539827 HSD17B13Q7Z5P4 300 aaPredicted RBP18.39■□□□□ 0.53
HOMER3-204ENST00000539827 FAM90A26D6RGX4 464 aa18.38■□□□□ 0.53
HOMER3-204ENST00000539827 TXNL1O43396 289 aa18.38■□□□□ 0.53
HOMER3-204ENST00000539827 FSTL3O95633 263 aa18.38■□□□□ 0.53
HOMER3-204ENST00000539827 FAM157CP0CG43 387 aa18.38■□□□□ 0.53
HOMER3-204ENST00000539827 UBE2KP61086 200 aa18.38■□□□□ 0.53
HOMER3-204ENST00000539827 TNFRSF9Q07011 255 aa18.38■□□□□ 0.53
HOMER3-204ENST00000539827 VKORC1L1Q8N0U8 176 aa18.38■□□□□ 0.53
HOMER3-204ENST00000539827 ARV1Q9H2C2 271 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms