RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 ARG1P05089 322 aa10□□□□□ -0.81
CLSTN3-208ENST00000538933 OR8U9P0C7N5 309 aa10□□□□□ -0.81
CLSTN3-208ENST00000538933 S100GP29377 79 aa10□□□□□ -0.81
CLSTN3-208ENST00000538933 GPR12P47775 334 aa10□□□□□ -0.81
CLSTN3-208ENST00000538933 LGALS4P56470 323 aa10□□□□□ -0.81
CLSTN3-208ENST00000538933 IFITM3Q01628 133 aa10□□□□□ -0.81
CLSTN3-208ENST00000538933 PRB3Q04118 309 aaPredicted RBP10□□□□□ -0.81
CLSTN3-208ENST00000538933 EGFEM1PQ0D2K5 195 aa10□□□□□ -0.81
CLSTN3-208ENST00000538933 KLRD1Q13241 179 aa10□□□□□ -0.81
CLSTN3-208ENST00000538933 RBMS2Q15434 407 aaKnown RBP10□□□□□ -0.81
CLSTN3-208ENST00000538933 ABCA11PQ4W5N1 156 aa10□□□□□ -0.81
CLSTN3-208ENST00000538933 LPCAT3Q6P1A2 487 aa10□□□□□ -0.81
CLSTN3-208ENST00000538933 DHRS11Q6UWP2 260 aa10□□□□□ -0.81
CLSTN3-208ENST00000538933 Q8N7P7 452 aa10□□□□□ -0.81
CLSTN3-208ENST00000538933 OR8U1Q8NH10 309 aa10□□□□□ -0.81
CLSTN3-208ENST00000538933 OR2T6Q8NHC8 308 aa10□□□□□ -0.81
CLSTN3-208ENST00000538933 TERB2Q8NHR7 220 aa10□□□□□ -0.81
CLSTN3-208ENST00000538933 CITED2Q99967 270 aaPredicted RBP10□□□□□ -0.81
CLSTN3-208ENST00000538933 SLC5A7Q9GZV3 580 aa10□□□□□ -0.81
CLSTN3-208ENST00000538933 SERTAD4Q9NUC0 356 aa10□□□□□ -0.81
CLSTN3-208ENST00000538933 C14orf166Q9Y224 244 aaKnown RBP10□□□□□ -0.81
CLSTN3-208ENST00000538933 AMMECR1Q9Y4X0 333 aaPredicted RBP10□□□□□ -0.81
CLSTN3-208ENST00000538933 STARD9Q9P2P6 4700 aa10□□□□□ -0.81
CLSTN3-208ENST00000538933 A0A1W2PRD5 423 aa9.99□□□□□ -0.81
CLSTN3-208ENST00000538933 A0A1W2PRF3 423 aa9.99□□□□□ -0.81
CLSTN3-208ENST00000538933 A0A1W2PRM7 423 aa9.99□□□□□ -0.81
CLSTN3-208ENST00000538933 J3QR06 171 aa9.99□□□□□ -0.81
CLSTN3-208ENST00000538933 NPFFO15130 113 aa9.99□□□□□ -0.81
CLSTN3-208ENST00000538933 ZNF735P0CB33 412 aa9.99□□□□□ -0.81
CLSTN3-208ENST00000538933 CCR6P51684 374 aa9.99□□□□□ -0.81
CLSTN3-208ENST00000538933 DLX1P56177 255 aa9.99□□□□□ -0.81
CLSTN3-208ENST00000538933 RGS21Q2M5E4 152 aa9.99□□□□□ -0.81
CLSTN3-208ENST00000538933 Q3ZCU0 254 aa9.99□□□□□ -0.81
CLSTN3-208ENST00000538933 FAM53AQ6NSI3 398 aaPredicted RBP9.99□□□□□ -0.81
CLSTN3-208ENST00000538933 C11orf42Q8N5U0 333 aa9.99□□□□□ -0.81
CLSTN3-208ENST00000538933 OR4C13Q8NGP0 309 aa9.99□□□□□ -0.81
CLSTN3-208ENST00000538933 ZFAND1Q8TCF1 268 aa9.99□□□□□ -0.81
CLSTN3-208ENST00000538933 TNFRSF14Q92956 283 aa9.99□□□□□ -0.81
CLSTN3-208ENST00000538933 MOB3AQ96BX8 217 aa9.99□□□□□ -0.81
CLSTN3-208ENST00000538933 AJUBAQ96IF1 538 aa9.99□□□□□ -0.81
CLSTN3-208ENST00000538933 SLC25A21Q9BQT8 299 aaPredicted RBP9.99□□□□□ -0.81
CLSTN3-208ENST00000538933 OR2D2Q9H210 308 aa9.99□□□□□ -0.81
CLSTN3-208ENST00000538933 RANBP3Q9H6Z4 567 aaPredicted RBP9.99□□□□□ -0.81
CLSTN3-208ENST00000538933 GAR1Q9NY12 217 aaKnown RBP9.99□□□□□ -0.81
CLSTN3-208ENST00000538933 SLC2A8Q9NY64 477 aa9.99□□□□□ -0.81
CLSTN3-208ENST00000538933 COPZ2Q9P299 210 aa9.99□□□□□ -0.81
CLSTN3-208ENST00000538933 RNF150Q9ULK6 438 aa9.99□□□□□ -0.81
CLSTN3-208ENST00000538933 U3KQK5 164 aa9.99□□□□□ -0.81
CLSTN3-208ENST00000538933 A0A087X0M5 115 aa9.98□□□□□ -0.81
CLSTN3-208ENST00000538933 A0A1B0GX30 115 aa9.98□□□□□ -0.81
CLSTN3-208ENST00000538933 OR5H14A6NHG9 310 aa9.98□□□□□ -0.81
CLSTN3-208ENST00000538933 H3BUX3 64 aa9.98□□□□□ -0.81
CLSTN3-208ENST00000538933 ITGB1BP1O14713 200 aa9.98□□□□□ -0.81
CLSTN3-208ENST00000538933 HSD17B6O14756 317 aa9.98□□□□□ -0.81
CLSTN3-208ENST00000538933 TUSC2O75896 110 aa9.98□□□□□ -0.81
CLSTN3-208ENST00000538933 SLC22A5O76082 557 aa9.98□□□□□ -0.81
CLSTN3-208ENST00000538933 PTTG1O95997 202 aa9.98□□□□□ -0.81
CLSTN3-208ENST00000538933 RLN1P04808 185 aa9.98□□□□□ -0.81
CLSTN3-208ENST00000538933 CD33P20138 364 aa9.98□□□□□ -0.81
CLSTN3-208ENST00000538933 CD34P28906 385 aa9.98□□□□□ -0.81
CLSTN3-208ENST00000538933 LY6G6FQ5SQ64 297 aa9.98□□□□□ -0.81
CLSTN3-208ENST00000538933 CASC10Q5T4H9 136 aa9.98□□□□□ -0.81
CLSTN3-208ENST00000538933 CMTM1Q8IZ96 169 aa9.98□□□□□ -0.81
CLSTN3-208ENST00000538933 SLC38A6Q8IZM9 456 aa9.98□□□□□ -0.81
CLSTN3-208ENST00000538933 BEND2Q8NDZ0 799 aa9.98□□□□□ -0.81
CLSTN3-208ENST00000538933 MARCH1Q8TCQ1 289 aa9.98□□□□□ -0.81
CLSTN3-208ENST00000538933 CREB3L1Q96BA8 519 aa9.98□□□□□ -0.81
CLSTN3-208ENST00000538933 S1PR3Q99500 378 aa9.98□□□□□ -0.81
CLSTN3-208ENST00000538933 TOLLIPQ9H0E2 274 aa9.98□□□□□ -0.81
CLSTN3-208ENST00000538933 PARP12Q9H0J9 701 aaKnown RBP9.98□□□□□ -0.81
CLSTN3-208ENST00000538933 FXYD6Q9H0Q3 95 aa9.98□□□□□ -0.81
CLSTN3-208ENST00000538933 GHITMQ9H3K2 345 aa9.98□□□□□ -0.81
CLSTN3-208ENST00000538933 PIPOXQ9P0Z9 390 aa9.98□□□□□ -0.81
CLSTN3-208ENST00000538933 RAB29O14966 203 aa9.97□□□□□ -0.81
CLSTN3-208ENST00000538933 SLC31A2O15432 143 aa9.97□□□□□ -0.81
CLSTN3-208ENST00000538933 NHLRC4P0CG21 123 aaPredicted RBP9.97□□□□□ -0.81
CLSTN3-208ENST00000538933 HTR1DP28221 377 aa9.97□□□□□ -0.81
CLSTN3-208ENST00000538933 SAA4P35542 130 aa9.97□□□□□ -0.81
CLSTN3-208ENST00000538933 CEACAM3P40198 252 aa9.97□□□□□ -0.81
CLSTN3-208ENST00000538933 HLA-DRB5Q30154 266 aa9.97□□□□□ -0.81
CLSTN3-208ENST00000538933 TRIM16LQ309B1 348 aa9.97□□□□□ -0.81
CLSTN3-208ENST00000538933 CT45A1Q5HYN5 189 aa9.97□□□□□ -0.81
CLSTN3-208ENST00000538933 ZNF660Q6AZW8 331 aaPredicted RBP9.97□□□□□ -0.81
CLSTN3-208ENST00000538933 PLET1Q6UQ28 207 aa9.97□□□□□ -0.81
CLSTN3-208ENST00000538933 SLC25A48Q6ZT89 311 aaKnown RBP9.97□□□□□ -0.81
CLSTN3-208ENST00000538933 LHFPL1Q86WI0 220 aa9.97□□□□□ -0.81
CLSTN3-208ENST00000538933 ZNF645Q8N7E2 425 aa9.97□□□□□ -0.81
CLSTN3-208ENST00000538933 C8orf31Q8N9H6 132 aa9.97□□□□□ -0.81
CLSTN3-208ENST00000538933 CCDC71LQ8N9Z2 235 aa9.97□□□□□ -0.81
CLSTN3-208ENST00000538933 CT45A3Q8NHU0 189 aa9.97□□□□□ -0.81
CLSTN3-208ENST00000538933 C17orf50Q8WW18 174 aa9.97□□□□□ -0.81
CLSTN3-208ENST00000538933 ABHD14BQ96IU4 210 aa9.97□□□□□ -0.81
CLSTN3-208ENST00000538933 CCL28Q9NRJ3 127 aa9.97□□□□□ -0.81
CLSTN3-208ENST00000538933 NUBP2Q9Y5Y2 271 aa9.97□□□□□ -0.81
CLSTN3-208ENST00000538933 TRAV6A0A075B6T7 132 aa9.96□□□□□ -0.82
CLSTN3-208ENST00000538933 IGKV1D-13A0A0B4J2D9 117 aa9.96□□□□□ -0.82
CLSTN3-208ENST00000538933 GPR31O00270 319 aa9.96□□□□□ -0.82
CLSTN3-208ENST00000538933 ARPC1BO15143 372 aaKnown RBP9.96□□□□□ -0.82
CLSTN3-208ENST00000538933 CHST1O43916 411 aa9.96□□□□□ -0.82
CLSTN3-208ENST00000538933 NDUFB6O95139 128 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms