RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 DHODHQ02127 395 aa11.49□□□□□ -0.57
CD4-208ENST00000538827 OR11H6Q8NGC7 330 aa11.49□□□□□ -0.57
CD4-208ENST00000538827 OR4P4Q8NGL7 312 aa11.49□□□□□ -0.57
CD4-208ENST00000538827 RPEQ96AT9 228 aa11.49□□□□□ -0.57
CD4-208ENST00000538827 TP53RKQ96S44 253 aa11.49□□□□□ -0.57
CD4-208ENST00000538827 HSD17B10Q99714 261 aaKnown RBP11.49□□□□□ -0.57
CD4-208ENST00000538827 MRPL20Q9BYC9 149 aaKnown RBP11.49□□□□□ -0.57
CD4-208ENST00000538827 KCNIP3Q9Y2W7 256 aa11.49□□□□□ -0.57
CD4-208ENST00000538827 SNRPGP15A8MWD9 76 aa11.48□□□□□ -0.57
CD4-208ENST00000538827 ODF3BA8MYP8 253 aa11.48□□□□□ -0.57
CD4-208ENST00000538827 H0Y980 276 aa11.48□□□□□ -0.57
CD4-208ENST00000538827 BUB1B-PAK6H3BSN5 160 aa11.48□□□□□ -0.57
CD4-208ENST00000538827 IGLV1-47P01700 117 aa11.48□□□□□ -0.57
CD4-208ENST00000538827 F2RP25116 425 aa11.48□□□□□ -0.57
CD4-208ENST00000538827 HTR1DP28221 377 aa11.48□□□□□ -0.57
CD4-208ENST00000538827 THBS3P49746 956 aa11.48□□□□□ -0.57
CD4-208ENST00000538827 RPL30P62888 115 aaKnown RBP11.48□□□□□ -0.57
CD4-208ENST00000538827 DIAPH2-AS1Q14236 149 aa11.48□□□□□ -0.57
CD4-208ENST00000538827 RUSC1-AS1Q66K80 236 aa11.48□□□□□ -0.57
CD4-208ENST00000538827 ZNF66Q6ZN08 573 aa11.48□□□□□ -0.57
CD4-208ENST00000538827 ZNF833PQ6ZTB9 187 aa11.48□□□□□ -0.57
CD4-208ENST00000538827 TGIF2LXQ8IUE1 241 aa11.48□□□□□ -0.57
CD4-208ENST00000538827 C12orf45Q8N5I9 185 aaPredicted RBP11.48□□□□□ -0.57
CD4-208ENST00000538827 COQ8AQ8NI60 647 aa11.48□□□□□ -0.57
CD4-208ENST00000538827 PHB2Q99623 299 aa11.48□□□□□ -0.57
CD4-208ENST00000538827 MED28Q9H204 178 aa11.48□□□□□ -0.57
CD4-208ENST00000538827 GHITMQ9H3K2 345 aa11.48□□□□□ -0.57
CD4-208ENST00000538827 UNKLQ9H9P5 680 aaKnown RBP11.48□□□□□ -0.57
CD4-208ENST00000538827 TLN2Q9Y4G6 2542 aa11.47□□□□□ -0.57
CD4-208ENST00000538827 LINC00473A8K010 186 aa11.47□□□□□ -0.57
CD4-208ENST00000538827 A8MV72 311 aaPredicted RBP11.47□□□□□ -0.57
CD4-208ENST00000538827 J3QLI3 93 aa11.47□□□□□ -0.57
CD4-208ENST00000538827 DUS4LO95620 317 aaKnown RBP11.47□□□□□ -0.57
CD4-208ENST00000538827 DUTP33316 252 aaKnown RBP11.47□□□□□ -0.57
CD4-208ENST00000538827 CEACAM3P40198 252 aa11.47□□□□□ -0.57
CD4-208ENST00000538827 LINC00205P59089 165 aa11.47□□□□□ -0.57
CD4-208ENST00000538827 ZNF816Q0VGE8 651 aaPredicted RBP11.47□□□□□ -0.57
CD4-208ENST00000538827 EIF4EBP1Q13541 118 aaPredicted RBP11.47□□□□□ -0.57
CD4-208ENST00000538827 ANKRD55Q3KP44 614 aa11.47□□□□□ -0.57
CD4-208ENST00000538827 TPTE2P1Q5T6R2 138 aa11.47□□□□□ -0.57
CD4-208ENST00000538827 GPR157Q5UAW9 335 aa11.47□□□□□ -0.57
CD4-208ENST00000538827 FAM71F2Q6NXP2 309 aa11.47□□□□□ -0.57
CD4-208ENST00000538827 C1orf229Q6ZS94 237 aaPredicted RBP11.47□□□□□ -0.57
CD4-208ENST00000538827 LHFPL4Q7Z7J7 247 aa11.47□□□□□ -0.57
CD4-208ENST00000538827 RNASE11Q8TAA1 199 aaKnown RBP11.47□□□□□ -0.57
CD4-208ENST00000538827 ADTRPQ96IZ2 230 aa11.47□□□□□ -0.57
CD4-208ENST00000538827 ZNF251Q9BRH9 671 aa11.47□□□□□ -0.57
CD4-208ENST00000538827 GAB2Q9UQC2 676 aa11.47□□□□□ -0.57
CD4-208ENST00000538827 PRELID3BQ9Y3B1 194 aa11.47□□□□□ -0.57
CD4-208ENST00000538827 LEUTXA8MZ59 168 aa11.46□□□□□ -0.57
CD4-208ENST00000538827 GOSR2O14653 212 aa11.46□□□□□ -0.57
CD4-208ENST00000538827 NPFFO15130 113 aa11.46□□□□□ -0.57
CD4-208ENST00000538827 FCGR3BO75015 233 aa11.46□□□□□ -0.57
CD4-208ENST00000538827 APOA2P02652 100 aa11.46□□□□□ -0.57
CD4-208ENST00000538827 SERPINE2P07093 398 aa11.46□□□□□ -0.57
CD4-208ENST00000538827 KIR2DS2P43631 304 aa11.46□□□□□ -0.57
CD4-208ENST00000538827 BCAP31P51572 246 aa11.46□□□□□ -0.57
CD4-208ENST00000538827 UBE2E1P51965 193 aa11.46□□□□□ -0.57
CD4-208ENST00000538827 ZNF137PP52743 207 aa11.46□□□□□ -0.57
CD4-208ENST00000538827 SRPXP78539 464 aa11.46□□□□□ -0.57
CD4-208ENST00000538827 TMEM187Q14656 261 aa11.46□□□□□ -0.57
CD4-208ENST00000538827 LIAT1Q6ZQX7 453 aa11.46□□□□□ -0.57
CD4-208ENST00000538827 MOB3BQ86TA1 216 aa11.46□□□□□ -0.57
CD4-208ENST00000538827 SPAG16Q8N0X2 631 aa11.46□□□□□ -0.57
CD4-208ENST00000538827 CADM3Q8N126 398 aa11.46□□□□□ -0.57
CD4-208ENST00000538827 GALNT14Q96FL9 552 aa11.46□□□□□ -0.57
CD4-208ENST00000538827 SLC35D1Q9NTN3 355 aa11.46□□□□□ -0.57
CD4-208ENST00000538827 DPM3Q9P2X0 92 aa11.46□□□□□ -0.57
CD4-208ENST00000538827 MGAT4CQ9UBM8 478 aa11.46□□□□□ -0.57
CD4-208ENST00000538827 HILPDAQ9Y5L2 63 aa11.46□□□□□ -0.57
CD4-208ENST00000538827 IGHV1-69DA0A0B4J2H0 117 aa11.45□□□□□ -0.58
CD4-208ENST00000538827 CENPVL3A0A0U1RRI6 287 aa11.45□□□□□ -0.58
CD4-208ENST00000538827 CCSO14618 274 aa11.45□□□□□ -0.58
CD4-208ENST00000538827 PROP1O75360 226 aa11.45□□□□□ -0.58
CD4-208ENST00000538827 IGHV1-69P01742 117 aa11.45□□□□□ -0.58
CD4-208ENST00000538827 GAPDHP04406 335 aaKnown RBP11.45□□□□□ -0.58
CD4-208ENST00000538827 IGHV4-38-2P0DP08 117 aa11.45□□□□□ -0.58
CD4-208ENST00000538827 EPHA1P21709 976 aa11.45□□□□□ -0.58
CD4-208ENST00000538827 UCP1P25874 307 aa11.45□□□□□ -0.58
CD4-208ENST00000538827 SAA4P35542 130 aa11.45□□□□□ -0.58
CD4-208ENST00000538827 RRAS2P62070 204 aaPredicted RBP11.45□□□□□ -0.58
CD4-208ENST00000538827 FCN2Q15485 313 aa11.45□□□□□ -0.58
CD4-208ENST00000538827 MINOS1Q5TGZ0 78 aa11.45□□□□□ -0.58
CD4-208ENST00000538827 TMEM268Q5VZI3 342 aa11.45□□□□□ -0.58
CD4-208ENST00000538827 ZNF695Q8IW36 515 aa11.45□□□□□ -0.58
CD4-208ENST00000538827 LGI3Q8N145 548 aa11.45□□□□□ -0.58
CD4-208ENST00000538827 ZNF383Q8NA42 475 aa11.45□□□□□ -0.58
CD4-208ENST00000538827 MITD1Q8WV92 249 aa11.45□□□□□ -0.58
CD4-208ENST00000538827 ST6GALNAC6Q969X2 333 aa11.45□□□□□ -0.58
CD4-208ENST00000538827 NABP2Q9BQ15 211 aa11.45□□□□□ -0.58
CD4-208ENST00000538827 TMEM222Q9H0R3 208 aa11.45□□□□□ -0.58
CD4-208ENST00000538827 TBL2Q9Y4P3 447 aaKnown RBP11.45□□□□□ -0.58
CD4-208ENST00000538827 MINOS1-NBL1R4GNA1 71 aa11.45□□□□□ -0.58
CD4-208ENST00000538827 IGHV3-72A0A0B4J1Y9 119 aa11.44□□□□□ -0.58
CD4-208ENST00000538827 FAM25EA8MYX2 175 aa11.44□□□□□ -0.58
CD4-208ENST00000538827 H7C2Y5 167 aa11.44□□□□□ -0.58
CD4-208ENST00000538827 TXNL1O43396 289 aa11.44□□□□□ -0.58
CD4-208ENST00000538827 B3GALNT1O75752 331 aa11.44□□□□□ -0.58
CD4-208ENST00000538827 S1PR2O95136 353 aa11.44□□□□□ -0.58
CD4-208ENST00000538827 AVPP01185 164 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms