RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 HSPB7Q9UBY9 170 aa12.22□□□□□ -0.45
ATL3-203ENST00000538786 CACNA1DQ01668 2161 aa12.22□□□□□ -0.45
ATL3-203ENST00000538786 SPTA1P02549 2419 aa12.22□□□□□ -0.45
ATL3-203ENST00000538786 PCNX1Q96RV3 2341 aa12.22□□□□□ -0.45
ATL3-203ENST00000538786 DSCAMO60469 2012 aa12.21□□□□□ -0.45
ATL3-203ENST00000538786 ZZEF1O43149 2961 aa12.21□□□□□ -0.45
ATL3-203ENST00000538786 HPRT1P00492 218 aa12.21□□□□□ -0.45
ATL3-203ENST00000538786 NFYBP25208 207 aa12.21□□□□□ -0.45
ATL3-203ENST00000538786 DYNLT3P51808 116 aa12.21□□□□□ -0.45
ATL3-203ENST00000538786 RPL31P62899 125 aaKnown RBP12.21□□□□□ -0.45
ATL3-203ENST00000538786 UTF1Q5T230 341 aa12.21□□□□□ -0.45
ATL3-203ENST00000538786 IL34Q6ZMJ4 242 aa12.21□□□□□ -0.45
ATL3-203ENST00000538786 H2BFWTQ7Z2G1 175 aa12.21□□□□□ -0.45
ATL3-203ENST00000538786 TMEM217Q8N7C4 229 aa12.21□□□□□ -0.45
ATL3-203ENST00000538786 HSD17B11Q8NBQ5 300 aa12.21□□□□□ -0.45
ATL3-203ENST00000538786 OR10A7Q8NGE5 316 aa12.21□□□□□ -0.45
ATL3-203ENST00000538786 TMEM204Q9BSN7 226 aa12.21□□□□□ -0.45
ATL3-203ENST00000538786 GAL3ST2Q9H3Q3 398 aa12.21□□□□□ -0.45
ATL3-203ENST00000538786 PARP11Q9NR21 331 aa12.21□□□□□ -0.45
ATL3-203ENST00000538786 PSENENQ9NZ42 101 aa12.21□□□□□ -0.45
ATL3-203ENST00000538786 RPUSD1Q9UJJ7 312 aaKnown RBP12.21□□□□□ -0.45
ATL3-203ENST00000538786 PRELID3BQ9Y3B1 194 aa12.21□□□□□ -0.45
ATL3-203ENST00000538786 MARCH11A6NNE9 402 aa12.21□□□□□ -0.46
ATL3-203ENST00000538786 H3BP45 60 aa12.21□□□□□ -0.46
ATL3-203ENST00000538786 NDUFB3O43676 98 aa12.21□□□□□ -0.46
ATL3-203ENST00000538786 FCGR3BO75015 233 aa12.21□□□□□ -0.46
ATL3-203ENST00000538786 DANCRP0C864 163 aa12.21□□□□□ -0.46
ATL3-203ENST00000538786 IAPPP10997 89 aa12.21□□□□□ -0.46
ATL3-203ENST00000538786 LOXP28300 417 aaPredicted RBP12.21□□□□□ -0.46
ATL3-203ENST00000538786 KIR2DS2P43631 304 aa12.21□□□□□ -0.46
ATL3-203ENST00000538786 TFF3Q07654 80 aa12.21□□□□□ -0.46
ATL3-203ENST00000538786 LRRC10Q5BKY1 277 aa12.21□□□□□ -0.46
ATL3-203ENST00000538786 ATP5SQ99766 215 aa12.21□□□□□ -0.46
ATL3-203ENST00000538786 SH3BGRL3Q9H299 93 aa12.21□□□□□ -0.46
ATL3-203ENST00000538786 C19orf12Q9NSK7 152 aa12.21□□□□□ -0.46
ATL3-203ENST00000538786 KAAG1Q9UBP8 84 aa12.21□□□□□ -0.46
ATL3-203ENST00000538786 TPRP12270 2363 aaKnown RBP12.2□□□□□ -0.46
ATL3-203ENST00000538786 TMEM8BA6NDV4 472 aa12.2□□□□□ -0.46
ATL3-203ENST00000538786 NDUFA2O43678 99 aa12.2□□□□□ -0.46
ATL3-203ENST00000538786 FCN3O75636 299 aa12.2□□□□□ -0.46
ATL3-203ENST00000538786 RAB5CP51148 216 aa12.2□□□□□ -0.46
ATL3-203ENST00000538786 TUSC1Q2TAM9 212 aa12.2□□□□□ -0.46
ATL3-203ENST00000538786 HFEQ30201 348 aa12.2□□□□□ -0.46
ATL3-203ENST00000538786 PRAMEF5Q5TYX0 476 aa12.2□□□□□ -0.46
ATL3-203ENST00000538786 R3HDM4Q96D70 268 aa12.2□□□□□ -0.46
ATL3-203ENST00000538786 S1PR3Q99500 378 aa12.2□□□□□ -0.46
ATL3-203ENST00000538786 HRH4Q9H3N8 390 aa12.2□□□□□ -0.46
ATL3-203ENST00000538786 RBKSQ9H477 322 aa12.2□□□□□ -0.46
ATL3-203ENST00000538786 RAI1Q7Z5J4 1906 aaPredicted RBP12.2□□□□□ -0.46
ATL3-203ENST00000538786 SAA2-SAA4A0A096LPE2 208 aa12.19□□□□□ -0.46
ATL3-203ENST00000538786 A0A1W2PPE3 182 aa12.19□□□□□ -0.46
ATL3-203ENST00000538786 MMP23AO75900 390 aa12.19□□□□□ -0.46
ATL3-203ENST00000538786 DFFBO76075 338 aa12.19□□□□□ -0.46
ATL3-203ENST00000538786 SAA2P0DJI9 122 aaPredicted RBP12.19□□□□□ -0.46
ATL3-203ENST00000538786 TMEM267Q0VDI3 215 aaPredicted RBP12.19□□□□□ -0.46
ATL3-203ENST00000538786 PJVKQ0ZLH3 352 aa12.19□□□□□ -0.46
ATL3-203ENST00000538786 ZNF273Q14593 569 aa12.19□□□□□ -0.46
ATL3-203ENST00000538786 BTNL8Q6UX41 500 aa12.19□□□□□ -0.46
ATL3-203ENST00000538786 LYPD2Q6UXB3 125 aa12.19□□□□□ -0.46
ATL3-203ENST00000538786 Q6ZRG5 221 aa12.19□□□□□ -0.46
ATL3-203ENST00000538786 STPG2Q8N412 459 aa12.19□□□□□ -0.46
ATL3-203ENST00000538786 DDB2Q92466 427 aa12.19□□□□□ -0.46
ATL3-203ENST00000538786 ICE1Q9Y2F5 2266 aa12.19□□□□□ -0.46
ATL3-203ENST00000538786 FAM90A9PA6NNJ1 464 aa12.19□□□□□ -0.46
ATL3-203ENST00000538786 ARHGDIBP52566 201 aa12.19□□□□□ -0.46
ATL3-203ENST00000538786 F2RL1P55085 397 aa12.19□□□□□ -0.46
ATL3-203ENST00000538786 MRPS11P82912 194 aaKnown RBP12.19□□□□□ -0.46
ATL3-203ENST00000538786 HEPN1Q6WQI6 88 aa12.19□□□□□ -0.46
ATL3-203ENST00000538786 C1orf229Q6ZS94 237 aaPredicted RBP12.19□□□□□ -0.46
ATL3-203ENST00000538786 SLC25A48Q6ZT89 311 aaKnown RBP12.19□□□□□ -0.46
ATL3-203ENST00000538786 LYG1Q8N1E2 194 aa12.19□□□□□ -0.46
ATL3-203ENST00000538786 BPIFCQ8NFQ6 507 aa12.19□□□□□ -0.46
ATL3-203ENST00000538786 LYPD6BQ8NI32 183 aa12.19□□□□□ -0.46
ATL3-203ENST00000538786 GNPNAT1Q96EK6 184 aaPredicted RBP12.19□□□□□ -0.46
ATL3-203ENST00000538786 ZNF714Q96N38 554 aa12.19□□□□□ -0.46
ATL3-203ENST00000538786 ZNF251Q9BRH9 671 aa12.19□□□□□ -0.46
ATL3-203ENST00000538786 CTSZQ9UBR2 303 aa12.19□□□□□ -0.46
ATL3-203ENST00000538786 CACFD1Q9UGQ2 172 aa12.19□□□□□ -0.46
ATL3-203ENST00000538786 STRAPQ9Y3F4 350 aaKnown RBP12.19□□□□□ -0.46
ATL3-203ENST00000538786 DAOP14920 347 aa12.18□□□□□ -0.46
ATL3-203ENST00000538786 ATP6V0CP27449 155 aa12.18□□□□□ -0.46
ATL3-203ENST00000538786 THBS3P49746 956 aa12.18□□□□□ -0.46
ATL3-203ENST00000538786 GNG10P50151 68 aa12.18□□□□□ -0.46
ATL3-203ENST00000538786 PPOXP50336 477 aa12.18□□□□□ -0.46
ATL3-203ENST00000538786 TMEM200BQ69YZ2 307 aa12.18□□□□□ -0.46
ATL3-203ENST00000538786 ADTRPQ96IZ2 230 aa12.18□□□□□ -0.46
ATL3-203ENST00000538786 TSNAXQ99598 290 aaKnown RBP12.18□□□□□ -0.46
ATL3-203ENST00000538786 NUP50Q9UKX7 468 aa12.18□□□□□ -0.46
ATL3-203ENST00000538786 ACACBO00763 2458 aa12.18□□□□□ -0.46
ATL3-203ENST00000538786 DVL1O14640 695 aa12.17□□□□□ -0.46
ATL3-203ENST00000538786 FSTL3O95633 263 aa12.17□□□□□ -0.46
ATL3-203ENST00000538786 METTL15P1P0C7V9 234 aa12.17□□□□□ -0.46
ATL3-203ENST00000538786 HBG1P69891 147 aa12.17□□□□□ -0.46
ATL3-203ENST00000538786 HBG2P69892 147 aa12.17□□□□□ -0.46
ATL3-203ENST00000538786 AARDQ4LEZ3 155 aa12.17□□□□□ -0.46
ATL3-203ENST00000538786 SPANXN5Q5MJ07 72 aa12.17□□□□□ -0.46
ATL3-203ENST00000538786 OR4S2Q8NH73 311 aa12.17□□□□□ -0.46
ATL3-203ENST00000538786 H1FXQ92522 213 aaKnown RBP12.17□□□□□ -0.46
ATL3-203ENST00000538786 UMAD1C9J7I0 102 aa12.17□□□□□ -0.46
ATL3-203ENST00000538786 TRIM77I1YAP6 450 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms