RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 ZNF816-ZNF321PA0A0X1KG74 233 aa7.66□□□□□ -1.18
SNHG1-209ENST00000538654 TCRBV21S2A2A0A5A6 115 aa7.66□□□□□ -1.18
SNHG1-209ENST00000538654 SYNGR3O43761 229 aa7.66□□□□□ -1.18
SNHG1-209ENST00000538654 MMP23AO75900 390 aa7.66□□□□□ -1.18
SNHG1-209ENST00000538654 SERPINA7P05543 415 aa7.66□□□□□ -1.18
SNHG1-209ENST00000538654 MRPL23Q16540 153 aaKnown RBP7.66□□□□□ -1.18
SNHG1-209ENST00000538654 PRSS8Q16651 343 aa7.66□□□□□ -1.18
SNHG1-209ENST00000538654 PARM1Q6UWI2 310 aa7.66□□□□□ -1.18
SNHG1-209ENST00000538654 Q6ZWC4 215 aa7.66□□□□□ -1.18
SNHG1-209ENST00000538654 LINC01551Q86U37 167 aa7.66□□□□□ -1.18
SNHG1-209ENST00000538654 HAPLN4Q86UW8 402 aa7.66□□□□□ -1.18
SNHG1-209ENST00000538654 ZNF611Q8N823 705 aa7.66□□□□□ -1.18
SNHG1-209ENST00000538654 OR1L3Q8NH93 324 aa7.66□□□□□ -1.18
SNHG1-209ENST00000538654 ORAOV1Q8WV07 137 aa7.66□□□□□ -1.18
SNHG1-209ENST00000538654 C22orf15Q8WYQ4 148 aa7.66□□□□□ -1.18
SNHG1-209ENST00000538654 ULBP2Q9BZM5 246 aa7.66□□□□□ -1.18
SNHG1-209ENST00000538654 ZDHHC11Q9H8X9 412 aa7.66□□□□□ -1.18
SNHG1-209ENST00000538654 PAM16Q9Y3D7 125 aa7.66□□□□□ -1.18
SNHG1-209ENST00000538654 C10orf142B7Z368 130 aa7.65□□□□□ -1.18
SNHG1-209ENST00000538654 F6UZH7 168 aa7.65□□□□□ -1.18
SNHG1-209ENST00000538654 SIVA1O15304 175 aa7.65□□□□□ -1.18
SNHG1-209ENST00000538654 ADORA2A-AS1P86434 159 aa7.65□□□□□ -1.18
SNHG1-209ENST00000538654 MSMO1Q15800 293 aa7.65□□□□□ -1.18
SNHG1-209ENST00000538654 SPANXN5Q5MJ07 72 aa7.65□□□□□ -1.18
SNHG1-209ENST00000538654 SAXO1Q8IYX7 474 aa7.65□□□□□ -1.18
SNHG1-209ENST00000538654 GPHA2Q96T91 129 aa7.65□□□□□ -1.18
SNHG1-209ENST00000538654 CDIP1Q9H305 208 aa7.65□□□□□ -1.18
SNHG1-209ENST00000538654 SLC25A22Q9H936 323 aa7.65□□□□□ -1.18
SNHG1-209ENST00000538654 AKIRIN1Q9H9L7 192 aaPredicted RBP7.65□□□□□ -1.18
SNHG1-209ENST00000538654 ELOVL5Q9NYP7 299 aa7.65□□□□□ -1.18
SNHG1-209ENST00000538654 HSPB7Q9UBY9 170 aa7.65□□□□□ -1.18
SNHG1-209ENST00000538654 OR2W1Q9Y3N9 320 aa7.65□□□□□ -1.18
SNHG1-209ENST00000538654 IGHV3-20A0A0C4DH32 117 aa7.65□□□□□ -1.18
SNHG1-209ENST00000538654 C11orf94C9JXX5 98 aa7.65□□□□□ -1.18
SNHG1-209ENST00000538654 IGKV1D-33P01593 117 aa7.65□□□□□ -1.18
SNHG1-209ENST00000538654 IGKV1-33P01594 117 aa7.65□□□□□ -1.18
SNHG1-209ENST00000538654 PSG2P11465 335 aa7.65□□□□□ -1.18
SNHG1-209ENST00000538654 MALP21145 153 aa7.65□□□□□ -1.18
SNHG1-209ENST00000538654 ADMP35318 185 aa7.65□□□□□ -1.18
SNHG1-209ENST00000538654 LEMD1Q68G75 181 aa7.65□□□□□ -1.18
SNHG1-209ENST00000538654 NFAM1Q8NET5 270 aaPredicted RBP7.65□□□□□ -1.18
SNHG1-209ENST00000538654 OR5P3Q8WZ94 311 aa7.65□□□□□ -1.18
SNHG1-209ENST00000538654 CIB3Q96Q77 187 aaPredicted RBP7.65□□□□□ -1.18
SNHG1-209ENST00000538654 HSPB9Q9BQS6 159 aa7.65□□□□□ -1.18
SNHG1-209ENST00000538654 TMEM147Q9BVK8 224 aa7.65□□□□□ -1.18
SNHG1-209ENST00000538654 PATZ1Q9HBE1 687 aaKnown RBP7.65□□□□□ -1.18
SNHG1-209ENST00000538654 TRAV39A0A0B4J263 110 aa7.65□□□□□ -1.19
SNHG1-209ENST00000538654 TRBV11-1A0A0K0K1C0 115 aa7.65□□□□□ -1.19
SNHG1-209ENST00000538654 hCG_38984A0A1B0GV85 526 aa7.65□□□□□ -1.19
SNHG1-209ENST00000538654 MDFIC2A0A1B0GVS7 189 aa7.65□□□□□ -1.19
SNHG1-209ENST00000538654 NUPR1O60356 82 aa7.65□□□□□ -1.19
SNHG1-209ENST00000538654 PAGE4O60829 102 aa7.65□□□□□ -1.19
SNHG1-209ENST00000538654 CRISP2P16562 243 aa7.65□□□□□ -1.19
SNHG1-209ENST00000538654 PTGDSP41222 190 aa7.65□□□□□ -1.19
SNHG1-209ENST00000538654 KLF3P57682 345 aaPredicted RBP7.65□□□□□ -1.19
SNHG1-209ENST00000538654 ZNF709Q8N972 641 aa7.65□□□□□ -1.19
SNHG1-209ENST00000538654 OR51H1Q8NH63 302 aa7.65□□□□□ -1.19
SNHG1-209ENST00000538654 SGMS2Q8NHU3 365 aa7.65□□□□□ -1.19
SNHG1-209ENST00000538654 OCC1Q8TAD7 63 aa7.65□□□□□ -1.19
SNHG1-209ENST00000538654 VN1R17PQ8TDU5 208 aa7.65□□□□□ -1.19
SNHG1-209ENST00000538654 PIGCQ92535 297 aa7.65□□□□□ -1.19
SNHG1-209ENST00000538654 RNF2Q99496 336 aa7.65□□□□□ -1.19
SNHG1-209ENST00000538654 TXNDC17Q9BRA2 123 aa7.65□□□□□ -1.19
SNHG1-209ENST00000538654 SLC45A2Q9UMX9 530 aa7.65□□□□□ -1.19
SNHG1-209ENST00000538654 TNFSF11O14788 317 aa7.64□□□□□ -1.19
SNHG1-209ENST00000538654 TDGF1P13385 188 aa7.64□□□□□ -1.19
SNHG1-209ENST00000538654 CD40P25942 277 aa7.64□□□□□ -1.19
SNHG1-209ENST00000538654 FGF12P61328 243 aa7.64□□□□□ -1.19
SNHG1-209ENST00000538654 ACSM6Q6P461 480 aa7.64□□□□□ -1.19
SNHG1-209ENST00000538654 TMEM14EPQ6UXP3 125 aa7.64□□□□□ -1.19
SNHG1-209ENST00000538654 Q6ZRM9 215 aa7.64□□□□□ -1.19
SNHG1-209ENST00000538654 ANKRD37Q7Z713 158 aa7.64□□□□□ -1.19
SNHG1-209ENST00000538654 OR5T1Q8NG75 326 aa7.64□□□□□ -1.19
SNHG1-209ENST00000538654 OR10V1Q8NGI7 309 aa7.64□□□□□ -1.19
SNHG1-209ENST00000538654 CLDN23Q96B33 292 aa7.64□□□□□ -1.19
SNHG1-209ENST00000538654 SFRP2Q96HF1 295 aa7.64□□□□□ -1.19
SNHG1-209ENST00000538654 SAMD10Q9BYL1 202 aa7.64□□□□□ -1.19
SNHG1-209ENST00000538654 UBE2ZQ9H832 354 aaPredicted RBP7.64□□□□□ -1.19
SNHG1-209ENST00000538654 KCNIP2Q9NS61 270 aa7.64□□□□□ -1.19
SNHG1-209ENST00000538654 LIN7CQ9NUP9 197 aaKnown RBP7.64□□□□□ -1.19
SNHG1-209ENST00000538654 ZNF586Q9NXT0 402 aa7.64□□□□□ -1.19
SNHG1-209ENST00000538654 FOXJ2Q9P0K8 574 aa7.64□□□□□ -1.19
SNHG1-209ENST00000538654 UQCR10Q9UDW1 63 aa7.64□□□□□ -1.19
SNHG1-209ENST00000538654 ERRFI1Q9UJM3 462 aaPredicted RBP7.64□□□□□ -1.19
SNHG1-209ENST00000538654 SEC16AO15027 2179 aa7.64□□□□□ -1.19
SNHG1-209ENST00000538654 TRBV6-6A0A0A6YYG2 114 aa7.64□□□□□ -1.19
SNHG1-209ENST00000538654 TRAV25A0A0B4J276 109 aa7.64□□□□□ -1.19
SNHG1-209ENST00000538654 SH2D7A6NKC9 451 aaPredicted RBP7.64□□□□□ -1.19
SNHG1-209ENST00000538654 C17orf112F2Z3M2 114 aa7.64□□□□□ -1.19
SNHG1-209ENST00000538654 CCL2P13500 99 aa7.64□□□□□ -1.19
SNHG1-209ENST00000538654 GABRG2P18507 467 aa7.64□□□□□ -1.19
SNHG1-209ENST00000538654 KITLGP21583 273 aa7.64□□□□□ -1.19
SNHG1-209ENST00000538654 MPLP40238 635 aa7.64□□□□□ -1.19
SNHG1-209ENST00000538654 PTTG1IPP53801 180 aa7.64□□□□□ -1.19
SNHG1-209ENST00000538654 TMEM249Q2WGJ8 235 aa7.64□□□□□ -1.19
SNHG1-209ENST00000538654 KRTAP27-1Q3LI81 207 aa7.64□□□□□ -1.19
SNHG1-209ENST00000538654 FFAR4Q5NUL3 377 aa7.64□□□□□ -1.19
SNHG1-209ENST00000538654 OR2D3Q8NGH3 330 aa7.64□□□□□ -1.19
SNHG1-209ENST00000538654 RPP25Q9BUL9 199 aaKnown RBP7.64□□□□□ -1.19
SNHG1-209ENST00000538654 WNT16Q9UBV4 365 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms