RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 WDR1O75083 606 aa15.67■□□□□ 0.1
SFSWAP-207ENST00000538548 SYNGR4O95473 234 aa15.67■□□□□ 0.1
SFSWAP-207ENST00000538548 CHRNB4P30926 498 aa15.67■□□□□ 0.1
SFSWAP-207ENST00000538548 ATP5G3P48201 142 aa15.67■□□□□ 0.1
SFSWAP-207ENST00000538548 NXPH1P58417 271 aa15.67■□□□□ 0.1
SFSWAP-207ENST00000538548 OR5A2Q8NGI9 324 aa15.67■□□□□ 0.1
SFSWAP-207ENST00000538548 OR1L1Q8NH94 360 aa15.67■□□□□ 0.1
SFSWAP-207ENST00000538548 TRAV9-1A0A075B6T8 112 aa15.67■□□□□ 0.1
SFSWAP-207ENST00000538548 PGPEP1LA6NFU8 196 aa15.67■□□□□ 0.1
SFSWAP-207ENST00000538548 DEFA4P12838 97 aa15.67■□□□□ 0.1
SFSWAP-207ENST00000538548 VWC2Q2TAL6 325 aa15.67■□□□□ 0.1
SFSWAP-207ENST00000538548 OR6C1Q96RD1 312 aa15.67■□□□□ 0.1
SFSWAP-207ENST00000538548 PROK2Q9HC23 129 aa15.67■□□□□ 0.1
SFSWAP-207ENST00000538548 TTC28Q96AY4 2481 aa15.67■□□□□ 0.1
SFSWAP-207ENST00000538548 CBLN1P23435 193 aa15.66■□□□□ 0.1
SFSWAP-207ENST00000538548 GMPPAQ96IJ6 420 aaPredicted RBP15.66■□□□□ 0.1
SFSWAP-207ENST00000538548 SGCZQ96LD1 299 aa15.66■□□□□ 0.1
SFSWAP-207ENST00000538548 SAMD10Q9BYL1 202 aa15.66■□□□□ 0.1
SFSWAP-207ENST00000538548 RNF212BA8MTL3 300 aa15.66■□□□□ 0.1
SFSWAP-207ENST00000538548 G3V3Y1 287 aa15.66■□□□□ 0.1
SFSWAP-207ENST00000538548 GNG10P50151 68 aa15.66■□□□□ 0.1
SFSWAP-207ENST00000538548 UBE2G2P60604 165 aa15.66■□□□□ 0.1
SFSWAP-207ENST00000538548 CIB3Q96Q77 187 aaPredicted RBP15.66■□□□□ 0.1
SFSWAP-207ENST00000538548 DLL3Q9NYJ7 618 aa15.66■□□□□ 0.1
SFSWAP-207ENST00000538548 CLN8Q9UBY8 286 aa15.66■□□□□ 0.1
SFSWAP-207ENST00000538548 TIMP3P35625 211 aa15.65■□□□□ 0.1
SFSWAP-207ENST00000538548 TRA2AQ13595 282 aaKnown RBP eCLIP15.65■□□□□ 0.1
SFSWAP-207ENST00000538548 BAGE3Q86Y29 109 aa15.65■□□□□ 0.1
SFSWAP-207ENST00000538548 BAGE2Q86Y30 109 aa15.65■□□□□ 0.1
SFSWAP-207ENST00000538548 RAB1CQ92928 201 aa15.65■□□□□ 0.1
SFSWAP-207ENST00000538548 MRPL18Q9H0U6 180 aaKnown RBP15.65■□□□□ 0.1
SFSWAP-207ENST00000538548 TNRC6BQ9UPQ9 1833 aaKnown RBP15.65■□□□□ 0.1
SFSWAP-207ENST00000538548 TRBV20OR9-2A0A075B6H5 130 aa15.65■□□□□ 0.1
SFSWAP-207ENST00000538548 Q0VG73 95 aa15.65■□□□□ 0.1
SFSWAP-207ENST00000538548 MOB1BQ7L9L4 216 aa15.65■□□□□ 0.1
SFSWAP-207ENST00000538548 MRPL21Q7Z2W9 205 aaKnown RBP15.65■□□□□ 0.1
SFSWAP-207ENST00000538548 DRAM1Q8N682 238 aa15.65■□□□□ 0.1
SFSWAP-207ENST00000538548 OR10G8Q8NGN5 311 aa15.65■□□□□ 0.1
SFSWAP-207ENST00000538548 TXNDC17Q9BRA2 123 aa15.65■□□□□ 0.1
SFSWAP-207ENST00000538548 TNRC6AQ8NDV7 1962 aaKnown RBP15.65■□□□□ 0.1
SFSWAP-207ENST00000538548 ZNF90Q03938 601 aa15.64■□□□□ 0.1
SFSWAP-207ENST00000538548 ZNF488Q96MN9 340 aa15.64■□□□□ 0.1
SFSWAP-207ENST00000538548 RNF2Q99496 336 aa15.64■□□□□ 0.1
SFSWAP-207ENST00000538548 SLC45A2Q9UMX9 530 aa15.64■□□□□ 0.1
SFSWAP-207ENST00000538548 SDK2Q58EX2 2172 aa15.64■□□□□ 0.09
SFSWAP-207ENST00000538548 LRRC30A6NM36 301 aa15.64■□□□□ 0.09
SFSWAP-207ENST00000538548 BMP5P22003 454 aa15.64■□□□□ 0.09
SFSWAP-207ENST00000538548 CARD18P57730 90 aa15.64■□□□□ 0.09
SFSWAP-207ENST00000538548 FOXJ2Q9P0K8 574 aa15.64■□□□□ 0.09
SFSWAP-207ENST00000538548 CCL7P80098 99 aa15.64■□□□□ 0.09
SFSWAP-207ENST00000538548 FAM58AQ8N1B3 248 aa15.64■□□□□ 0.09
SFSWAP-207ENST00000538548 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.64■□□□□ 0.09
SFSWAP-207ENST00000538548 CELA2AP08217 269 aa15.63■□□□□ 0.09
SFSWAP-207ENST00000538548 P0C879 139 aa15.63■□□□□ 0.09
SFSWAP-207ENST00000538548 TDGF1P13385 188 aa15.63■□□□□ 0.09
SFSWAP-207ENST00000538548 CTRLP40313 264 aa15.63■□□□□ 0.09
SFSWAP-207ENST00000538548 MMDQ15546 238 aa15.63■□□□□ 0.09
SFSWAP-207ENST00000538548 SYT13Q7L8C5 426 aa15.63■□□□□ 0.09
SFSWAP-207ENST00000538548 SIGLECL1Q8N7X8 197 aa15.63■□□□□ 0.09
SFSWAP-207ENST00000538548 CCDC74BQ96LY2 380 aa15.63■□□□□ 0.09
SFSWAP-207ENST00000538548 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.63■□□□□ 0.09
SFSWAP-207ENST00000538548 C20orf202A1L168 122 aa15.63■□□□□ 0.09
SFSWAP-207ENST00000538548 CCNOP22674 350 aa15.63■□□□□ 0.09
SFSWAP-207ENST00000538548 MLF1P58340 268 aa15.63■□□□□ 0.09
SFSWAP-207ENST00000538548 PCOLCEQ15113 449 aa15.63■□□□□ 0.09
SFSWAP-207ENST00000538548 TRIP6Q15654 476 aaKnown RBP15.63■□□□□ 0.09
SFSWAP-207ENST00000538548 ZNF552Q9H707 407 aaPredicted RBP15.63■□□□□ 0.09
SFSWAP-207ENST00000538548 ZNF586Q9NXT0 402 aa15.63■□□□□ 0.09
SFSWAP-207ENST00000538548 IL36BQ9NZH7 164 aa15.63■□□□□ 0.09
SFSWAP-207ENST00000538548 FBXL7Q9UJT9 491 aa15.63■□□□□ 0.09
SFSWAP-207ENST00000538548 RARRES3Q9UL19 164 aa15.63■□□□□ 0.09
SFSWAP-207ENST00000538548 DIDO1Q9BTC0 2240 aaKnown RBP15.62■□□□□ 0.09
SFSWAP-207ENST00000538548 TRAV39A0A0B4J263 110 aa15.62■□□□□ 0.09
SFSWAP-207ENST00000538548 TRAPPC6AO75865 159 aa15.62■□□□□ 0.09
SFSWAP-207ENST00000538548 QTRT1Q9BXR0 403 aaKnown RBP15.62■□□□□ 0.09
SFSWAP-207ENST00000538548 ODAMA1E959 279 aa15.62■□□□□ 0.09
SFSWAP-207ENST00000538548 ZG16O60844 167 aa15.62■□□□□ 0.09
SFSWAP-207ENST00000538548 MMP23AO75900 390 aa15.62■□□□□ 0.09
SFSWAP-207ENST00000538548 NRN1LQ496H8 165 aa15.62■□□□□ 0.09
SFSWAP-207ENST00000538548 C1orf174Q8IYL3 243 aa15.62■□□□□ 0.09
SFSWAP-207ENST00000538548 Q8N7P7 452 aa15.62■□□□□ 0.09
SFSWAP-207ENST00000538548 APOBEC3DQ96AK3 386 aaPredicted RBP15.62■□□□□ 0.09
SFSWAP-207ENST00000538548 GUCD1Q96NT3 240 aa15.62■□□□□ 0.09
SFSWAP-207ENST00000538548 UQCR10Q9UDW1 63 aa15.62■□□□□ 0.09
SFSWAP-207ENST00000538548 TRAV38-1A0A0B4J264 116 aa15.61■□□□□ 0.09
SFSWAP-207ENST00000538548 DIRC3C9JPN6 131 aa15.61■□□□□ 0.09
SFSWAP-207ENST00000538548 G6PCP35575 357 aa15.61■□□□□ 0.09
SFSWAP-207ENST00000538548 B3GALT5-AS1P59052 145 aa15.61■□□□□ 0.09
SFSWAP-207ENST00000538548 HLA-BQ31612 363 aa15.61■□□□□ 0.09
SFSWAP-207ENST00000538548 GGNQ86UU5 652 aa15.61■□□□□ 0.09
SFSWAP-207ENST00000538548 SLC25A45Q8N413 288 aa15.61■□□□□ 0.09
SFSWAP-207ENST00000538548 Q8N976 141 aa15.61■□□□□ 0.09
SFSWAP-207ENST00000538548 OCC1Q8TAD7 63 aa15.61■□□□□ 0.09
SFSWAP-207ENST00000538548 ZNF703Q9H7S9 590 aaPredicted RBP15.61■□□□□ 0.09
SFSWAP-207ENST00000538548 SH2D2AQ9NP31 389 aa15.61■□□□□ 0.09
SFSWAP-207ENST00000538548 A0A1W2PPV4 95 aa15.61■□□□□ 0.09
SFSWAP-207ENST00000538548 FCN1O00602 326 aa15.61■□□□□ 0.09
SFSWAP-207ENST00000538548 CXCL13O43927 109 aa15.61■□□□□ 0.09
SFSWAP-207ENST00000538548 RAMP3O60896 148 aa15.61■□□□□ 0.09
SFSWAP-207ENST00000538548 GPX1P07203 203 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms