RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 FBXL19-AS1Q494R0 122 aa11.64□□□□□ -0.55
ACTN1-205ENST00000538545 FAM209AQ5JX71 171 aa11.64□□□□□ -0.55
ACTN1-205ENST00000538545 CLEC18CQ8NCF0 446 aa11.64□□□□□ -0.55
ACTN1-205ENST00000538545 HRH4Q9H3N8 390 aa11.64□□□□□ -0.55
ACTN1-205ENST00000538545 NARFLQ9H6Q4 476 aa11.64□□□□□ -0.55
ACTN1-205ENST00000538545 ZNF462Q96JM2 2506 aa11.63□□□□□ -0.55
ACTN1-205ENST00000538545 SAA2-SAA4A0A096LPE2 208 aa11.63□□□□□ -0.55
ACTN1-205ENST00000538545 TRAV38-1A0A0B4J264 116 aa11.63□□□□□ -0.55
ACTN1-205ENST00000538545 F2RL2O00254 374 aa11.63□□□□□ -0.55
ACTN1-205ENST00000538545 RBMXL2O75526 392 aaKnown RBP11.63□□□□□ -0.55
ACTN1-205ENST00000538545 METTL15P1P0C7V9 234 aa11.63□□□□□ -0.55
ACTN1-205ENST00000538545 SAA2P0DJI9 122 aaPredicted RBP11.63□□□□□ -0.55
ACTN1-205ENST00000538545 LOXP28300 417 aaPredicted RBP11.63□□□□□ -0.55
ACTN1-205ENST00000538545 PAX5Q02548 391 aa11.63□□□□□ -0.55
ACTN1-205ENST00000538545 IL22RA2Q969J5 263 aa11.63□□□□□ -0.55
ACTN1-205ENST00000538545 MS4A5Q9H3V2 200 aa11.63□□□□□ -0.55
ACTN1-205ENST00000538545 TAS2R3Q9NYW6 316 aa11.63□□□□□ -0.55
ACTN1-205ENST00000538545 JPT1Q9UK76 154 aa11.63□□□□□ -0.55
ACTN1-205ENST00000538545 C19orf84I3L1E1 186 aa11.63□□□□□ -0.55
ACTN1-205ENST00000538545 DVL1O14640 695 aa11.63□□□□□ -0.55
ACTN1-205ENST00000538545 SOD3P08294 240 aa11.63□□□□□ -0.55
ACTN1-205ENST00000538545 ARL16Q0P5N6 197 aa11.63□□□□□ -0.55
ACTN1-205ENST00000538545 CR1LQ2VPA4 569 aa11.63□□□□□ -0.55
ACTN1-205ENST00000538545 ABHD14AQ9BUJ0 271 aa11.63□□□□□ -0.55
ACTN1-205ENST00000538545 MS4A7Q9GZW8 240 aaPredicted RBP11.63□□□□□ -0.55
ACTN1-205ENST00000538545 LYRM2Q9NU23 88 aaPredicted RBP11.63□□□□□ -0.55
ACTN1-205ENST00000538545 GFOD1Q9NXC2 390 aa11.63□□□□□ -0.55
ACTN1-205ENST00000538545 FAM208BQ5VWN6 2430 aa11.63□□□□□ -0.55
ACTN1-205ENST00000538545 TRAV3A0A0B4J244 114 aa11.62□□□□□ -0.55
ACTN1-205ENST00000538545 VSTM5A8MXK1 200 aa11.62□□□□□ -0.55
ACTN1-205ENST00000538545 YPEL1O60688 119 aa11.62□□□□□ -0.55
ACTN1-205ENST00000538545 REG1BP48304 166 aa11.62□□□□□ -0.55
ACTN1-205ENST00000538545 SWI5Q1ZZU3 235 aa11.62□□□□□ -0.55
ACTN1-205ENST00000538545 ZNF672Q499Z4 452 aaPredicted RBP11.62□□□□□ -0.55
ACTN1-205ENST00000538545 TMEM200BQ69YZ2 307 aa11.62□□□□□ -0.55
ACTN1-205ENST00000538545 PHYHIPLQ96FC7 376 aa11.62□□□□□ -0.55
ACTN1-205ENST00000538545 YPEL2Q96QA6 119 aa11.62□□□□□ -0.55
ACTN1-205ENST00000538545 TOLLIPQ9H0E2 274 aa11.62□□□□□ -0.55
ACTN1-205ENST00000538545 A0A1B0GU03 582 aa11.62□□□□□ -0.55
ACTN1-205ENST00000538545 B9A039 149 aa11.62□□□□□ -0.55
ACTN1-205ENST00000538545 MED6O75586 246 aa11.62□□□□□ -0.55
ACTN1-205ENST00000538545 CATR1Q13166 79 aa11.62□□□□□ -0.55
ACTN1-205ENST00000538545 SPANXN5Q5MJ07 72 aa11.62□□□□□ -0.55
ACTN1-205ENST00000538545 DUXBA0A1W2PPF3 345 aa11.61□□□□□ -0.55
ACTN1-205ENST00000538545 SYNGR2O43760 224 aa11.61□□□□□ -0.55
ACTN1-205ENST00000538545 NDUFS7O75251 213 aa11.61□□□□□ -0.55
ACTN1-205ENST00000538545 EIF3GO75821 320 aaKnown RBP eCLIP11.61□□□□□ -0.55
ACTN1-205ENST00000538545 OR9G9P0C7N8 305 aa11.61□□□□□ -0.55
ACTN1-205ENST00000538545 DIAPH2-AS1Q14236 149 aa11.61□□□□□ -0.55
ACTN1-205ENST00000538545 TUSC1Q2TAM9 212 aa11.61□□□□□ -0.55
ACTN1-205ENST00000538545 EDARADDQ8WWZ3 215 aa11.61□□□□□ -0.55
ACTN1-205ENST00000538545 DIRC2Q96SL1 478 aa11.61□□□□□ -0.55
ACTN1-205ENST00000538545 MARCH11A6NNE9 402 aa11.61□□□□□ -0.55
ACTN1-205ENST00000538545 PRB1P04280 392 aa11.61□□□□□ -0.55
ACTN1-205ENST00000538545 MYOD1P15172 320 aa11.61□□□□□ -0.55
ACTN1-205ENST00000538545 PVALBP20472 110 aaPredicted RBP11.61□□□□□ -0.55
ACTN1-205ENST00000538545 PXDC1Q5TGL8 231 aa11.61□□□□□ -0.55
ACTN1-205ENST00000538545 NARS2Q96I59 477 aaKnown RBP11.61□□□□□ -0.55
ACTN1-205ENST00000538545 NKX6-3A6NJ46 265 aa11.6□□□□□ -0.55
ACTN1-205ENST00000538545 TRAT1Q6PIZ9 186 aa11.6□□□□□ -0.55
ACTN1-205ENST00000538545 C1orf87Q8N0U7 546 aa11.6□□□□□ -0.55
ACTN1-205ENST00000538545 RNF141Q8WVD5 230 aa11.6□□□□□ -0.55
ACTN1-205ENST00000538545 LSM10Q969L4 123 aaKnown RBP11.6□□□□□ -0.55
ACTN1-205ENST00000538545 IDI2-AS1Q9NZ38 188 aa11.6□□□□□ -0.55
ACTN1-205ENST00000538545 LAMP3Q9UQV4 416 aa11.6□□□□□ -0.55
ACTN1-205ENST00000538545 RNF212BA8MTL3 300 aa11.6□□□□□ -0.55
ACTN1-205ENST00000538545 TAAR5O14804 337 aa11.6□□□□□ -0.55
ACTN1-205ENST00000538545 FGF16O43320 207 aa11.6□□□□□ -0.55
ACTN1-205ENST00000538545 JTBO76095 146 aa11.6□□□□□ -0.55
ACTN1-205ENST00000538545 HFEQ30201 348 aa11.6□□□□□ -0.55
ACTN1-205ENST00000538545 GPR157Q5UAW9 335 aa11.6□□□□□ -0.55
ACTN1-205ENST00000538545 TMEM182Q6ZP80 229 aaPredicted RBP11.6□□□□□ -0.55
ACTN1-205ENST00000538545 HAPLN4Q86UW8 402 aa11.6□□□□□ -0.55
ACTN1-205ENST00000538545 ZNF251Q9BRH9 671 aa11.6□□□□□ -0.55
ACTN1-205ENST00000538545 PSENENQ9NZ42 101 aa11.6□□□□□ -0.55
ACTN1-205ENST00000538545 FAM96BQ9Y3D0 163 aa11.6□□□□□ -0.55
ACTN1-205ENST00000538545 MMP24Q9Y5R2 645 aa11.6□□□□□ -0.55
ACTN1-205ENST00000538545 CRYZL1O95825 349 aa11.59□□□□□ -0.55
ACTN1-205ENST00000538545 MIDNQ504T8 468 aa11.59□□□□□ -0.55
ACTN1-205ENST00000538545 OR8G2PQ6IF36 304 aa11.59□□□□□ -0.55
ACTN1-205ENST00000538545 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.59□□□□□ -0.55
ACTN1-205ENST00000538545 R3HDM4Q96D70 268 aa11.59□□□□□ -0.55
ACTN1-205ENST00000538545 RBKSQ9H477 322 aa11.59□□□□□ -0.55
ACTN1-205ENST00000538545 FGF2P09038 288 aa11.59□□□□□ -0.55
ACTN1-205ENST00000538545 UBE2KP61086 200 aa11.59□□□□□ -0.55
ACTN1-205ENST00000538545 EFNB3Q15768 340 aa11.59□□□□□ -0.55
ACTN1-205ENST00000538545 Q6ZRG5 221 aa11.59□□□□□ -0.55
ACTN1-205ENST00000538545 H2BFWTQ7Z2G1 175 aa11.59□□□□□ -0.55
ACTN1-205ENST00000538545 UBAC2Q8NBM4 344 aa11.59□□□□□ -0.55
ACTN1-205ENST00000538545 ZBTB34Q8NCN2 500 aa11.59□□□□□ -0.55
ACTN1-205ENST00000538545 QTRT1Q9BXR0 403 aaKnown RBP11.59□□□□□ -0.55
ACTN1-205ENST00000538545 LPAR3Q9UBY5 353 aa11.59□□□□□ -0.55
ACTN1-205ENST00000538545 ABCA1O95477 2261 aa11.59□□□□□ -0.55
ACTN1-205ENST00000538545 TNFRSF13BO14836 293 aaPredicted RBP11.59□□□□□ -0.55
ACTN1-205ENST00000538545 NDUFB3O43676 98 aa11.59□□□□□ -0.55
ACTN1-205ENST00000538545 ATP6V0CP27449 155 aa11.59□□□□□ -0.55
ACTN1-205ENST00000538545 CDKN1AP38936 164 aa11.59□□□□□ -0.55
ACTN1-205ENST00000538545 MRPS11P82912 194 aaKnown RBP11.59□□□□□ -0.55
ACTN1-205ENST00000538545 ZNF383Q8NA42 475 aa11.59□□□□□ -0.55
ACTN1-205ENST00000538545 IGFBPL1Q8WX77 278 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms