RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 OR11H6Q8NGC7 330 aa8.69□□□□□ -1.02
TNFRSF1A-211ENST00000538363 CD300LFQ8TDQ1 290 aa8.69□□□□□ -1.02
TNFRSF1A-211ENST00000538363 RRNAD1Q96FB5 475 aaKnown RBP8.69□□□□□ -1.02
TNFRSF1A-211ENST00000538363 GPHA2Q96T91 129 aa8.69□□□□□ -1.02
TNFRSF1A-211ENST00000538363 MS4A7Q9GZW8 240 aaPredicted RBP8.69□□□□□ -1.02
TNFRSF1A-211ENST00000538363 IFI27L2Q9H2X8 130 aa8.69□□□□□ -1.02
TNFRSF1A-211ENST00000538363 YAE1D1Q9NRH1 226 aa8.69□□□□□ -1.02
TNFRSF1A-211ENST00000538363 SLC35D1Q9NTN3 355 aa8.69□□□□□ -1.02
TNFRSF1A-211ENST00000538363 ZNRD1Q9P1U0 126 aa8.69□□□□□ -1.02
TNFRSF1A-211ENST00000538363 MGAT4CQ9UBM8 478 aa8.69□□□□□ -1.02
TNFRSF1A-211ENST00000538363 GAB2Q9UQC2 676 aa8.69□□□□□ -1.02
TNFRSF1A-211ENST00000538363 TRAV40A0A0B4J280 105 aa8.68□□□□□ -1.02
TNFRSF1A-211ENST00000538363 H0Y980 276 aa8.68□□□□□ -1.02
TNFRSF1A-211ENST00000538363 RNASEK-C17orf49H0YIS7 233 aa8.68□□□□□ -1.02
TNFRSF1A-211ENST00000538363 GOSR2O14653 212 aa8.68□□□□□ -1.02
TNFRSF1A-211ENST00000538363 NPFFO15130 113 aa8.68□□□□□ -1.02
TNFRSF1A-211ENST00000538363 DUS4LO95620 317 aaKnown RBP8.68□□□□□ -1.02
TNFRSF1A-211ENST00000538363 HOXB5P09067 269 aa8.68□□□□□ -1.02
TNFRSF1A-211ENST00000538363 MC5RP33032 325 aa8.68□□□□□ -1.02
TNFRSF1A-211ENST00000538363 MECP2P51608 486 aaKnown RBP8.68□□□□□ -1.02
TNFRSF1A-211ENST00000538363 AKR1C2P52895 323 aa8.68□□□□□ -1.02
TNFRSF1A-211ENST00000538363 TAGLNQ01995 201 aaKnown RBP8.68□□□□□ -1.02
TNFRSF1A-211ENST00000538363 PAX2Q02962 417 aa8.68□□□□□ -1.02
TNFRSF1A-211ENST00000538363 ZNF816Q0VGE8 651 aaPredicted RBP8.68□□□□□ -1.02
TNFRSF1A-211ENST00000538363 HES1Q14469 280 aa8.68□□□□□ -1.02
TNFRSF1A-211ENST00000538363 UTF1Q5T230 341 aa8.68□□□□□ -1.02
TNFRSF1A-211ENST00000538363 MINOS1Q5TGZ0 78 aa8.68□□□□□ -1.02
TNFRSF1A-211ENST00000538363 TMEM268Q5VZI3 342 aa8.68□□□□□ -1.02
TNFRSF1A-211ENST00000538363 ZNF626Q68DY1 528 aa8.68□□□□□ -1.02
TNFRSF1A-211ENST00000538363 THOC7Q6I9Y2 204 aaKnown RBP8.68□□□□□ -1.02
TNFRSF1A-211ENST00000538363 GSG1LQ6UXU4 331 aa8.68□□□□□ -1.02
TNFRSF1A-211ENST00000538363 OR4S2Q8NH73 311 aa8.68□□□□□ -1.02
TNFRSF1A-211ENST00000538363 NANPQ8TBE9 248 aa8.68□□□□□ -1.02
TNFRSF1A-211ENST00000538363 TBX15Q96SF7 602 aa8.68□□□□□ -1.02
TNFRSF1A-211ENST00000538363 AIFM2Q9BRQ8 373 aa8.68□□□□□ -1.02
TNFRSF1A-211ENST00000538363 AGMATQ9BSE5 352 aa8.68□□□□□ -1.02
TNFRSF1A-211ENST00000538363 TBL2Q9Y4P3 447 aaKnown RBP8.68□□□□□ -1.02
TNFRSF1A-211ENST00000538363 MINOS1-NBL1R4GNA1 71 aa8.68□□□□□ -1.02
TNFRSF1A-211ENST00000538363 TACC2O95359 2948 aa8.67□□□□□ -1.02
TNFRSF1A-211ENST00000538363 IGHV1-69DA0A0B4J2H0 117 aa8.67□□□□□ -1.02
TNFRSF1A-211ENST00000538363 A0A1B0GVG6 124 aa8.67□□□□□ -1.02
TNFRSF1A-211ENST00000538363 RBMXL2O75526 392 aaKnown RBP8.67□□□□□ -1.02
TNFRSF1A-211ENST00000538363 IGHV1-69P01742 117 aa8.67□□□□□ -1.02
TNFRSF1A-211ENST00000538363 HNF1AP20823 631 aa8.67□□□□□ -1.02
TNFRSF1A-211ENST00000538363 BRS3P32247 399 aa8.67□□□□□ -1.02
TNFRSF1A-211ENST00000538363 DUTP33316 252 aaKnown RBP8.67□□□□□ -1.02
TNFRSF1A-211ENST00000538363 SRP14P37108 136 aaKnown RBP8.67□□□□□ -1.02
TNFRSF1A-211ENST00000538363 RAB13P51153 203 aa8.67□□□□□ -1.02
TNFRSF1A-211ENST00000538363 BCAP31P51572 246 aa8.67□□□□□ -1.02
TNFRSF1A-211ENST00000538363 RRAS2P62070 204 aaPredicted RBP8.67□□□□□ -1.02
TNFRSF1A-211ENST00000538363 RPS16P62249 146 aaKnown RBP8.67□□□□□ -1.02
TNFRSF1A-211ENST00000538363 SSX2Q16385 188 aa8.67□□□□□ -1.02
TNFRSF1A-211ENST00000538363 MIDNQ504T8 468 aa8.67□□□□□ -1.02
TNFRSF1A-211ENST00000538363 TPTE2P1Q5T6R2 138 aa8.67□□□□□ -1.02
TNFRSF1A-211ENST00000538363 FAM71F2Q6NXP2 309 aa8.67□□□□□ -1.02
TNFRSF1A-211ENST00000538363 DMBX1Q8NFW5 382 aa8.67□□□□□ -1.02
TNFRSF1A-211ENST00000538363 TMEM230Q96A57 120 aa8.67□□□□□ -1.02
TNFRSF1A-211ENST00000538363 C1orf159Q96HA4 380 aa8.67□□□□□ -1.02
TNFRSF1A-211ENST00000538363 TP53RKQ96S44 253 aa8.67□□□□□ -1.02
TNFRSF1A-211ENST00000538363 MRPL20Q9BYC9 149 aaKnown RBP8.67□□□□□ -1.02
TNFRSF1A-211ENST00000538363 CHIAQ9BZP6 476 aa8.67□□□□□ -1.02
TNFRSF1A-211ENST00000538363 TMEM222Q9H0R3 208 aa8.67□□□□□ -1.02
TNFRSF1A-211ENST00000538363 UNKLQ9H9P5 680 aaKnown RBP8.67□□□□□ -1.02
TNFRSF1A-211ENST00000538363 PRR13Q9NZ81 148 aa8.67□□□□□ -1.02
TNFRSF1A-211ENST00000538363 PDZD2O15018 2839 aa8.67□□□□□ -1.02
TNFRSF1A-211ENST00000538363 CR1P17927 2039 aa8.66□□□□□ -1.02
TNFRSF1A-211ENST00000538363 A0A0B4J2A0 478 aa8.66□□□□□ -1.02
TNFRSF1A-211ENST00000538363 CENPVL3A0A0U1RRI6 287 aa8.66□□□□□ -1.02
TNFRSF1A-211ENST00000538363 HMX3A6NHT5 357 aa8.66□□□□□ -1.02
TNFRSF1A-211ENST00000538363 OOSP1A8MZH6 123 aa8.66□□□□□ -1.02
TNFRSF1A-211ENST00000538363 SHOXO15266 292 aa8.66□□□□□ -1.02
TNFRSF1A-211ENST00000538363 CRYZL1O95825 349 aa8.66□□□□□ -1.02
TNFRSF1A-211ENST00000538363 HPRT1P00492 218 aa8.66□□□□□ -1.02
TNFRSF1A-211ENST00000538363 HRASP01112 189 aa8.66□□□□□ -1.02
TNFRSF1A-211ENST00000538363 IGLV1-47P01700 117 aa8.66□□□□□ -1.02
TNFRSF1A-211ENST00000538363 MMP9P14780 707 aa8.66□□□□□ -1.02
TNFRSF1A-211ENST00000538363 RPA2P15927 270 aa8.66□□□□□ -1.02
TNFRSF1A-211ENST00000538363 RELBQ01201 579 aa8.66□□□□□ -1.02
TNFRSF1A-211ENST00000538363 SPNS3Q6ZMD2 512 aa8.66□□□□□ -1.02
TNFRSF1A-211ENST00000538363 ZNF833PQ6ZTB9 187 aa8.66□□□□□ -1.02
TNFRSF1A-211ENST00000538363 LDLRAD3Q86YD5 345 aa8.66□□□□□ -1.02
TNFRSF1A-211ENST00000538363 KRTAP1-3Q8IUG1 177 aa8.66□□□□□ -1.02
TNFRSF1A-211ENST00000538363 MITD1Q8WV92 249 aa8.66□□□□□ -1.02
TNFRSF1A-211ENST00000538363 FLYWCH2Q96CP2 140 aaKnown RBP8.66□□□□□ -1.02
TNFRSF1A-211ENST00000538363 MALSU1Q96EH3 234 aa8.66□□□□□ -1.02
TNFRSF1A-211ENST00000538363 GALNT14Q96FL9 552 aa8.66□□□□□ -1.02
TNFRSF1A-211ENST00000538363 COMMD9Q9P000 198 aa8.66□□□□□ -1.02
TNFRSF1A-211ENST00000538363 GSKIPQ9P0R6 139 aa8.66□□□□□ -1.02
TNFRSF1A-211ENST00000538363 SHPKQ9UHJ6 478 aa8.66□□□□□ -1.02
TNFRSF1A-211ENST00000538363 WASHC3Q9Y3C0 194 aa8.66□□□□□ -1.02
TNFRSF1A-211ENST00000538363 ABCA2Q9BZC7 2435 aa8.66□□□□□ -1.02
TNFRSF1A-211ENST00000538363 CSMD2Q7Z408 3487 aa8.65□□□□□ -1.02
TNFRSF1A-211ENST00000538363 A0A096LNT2 108 aa8.65□□□□□ -1.02
TNFRSF1A-211ENST00000538363 IGHV3-72A0A0B4J1Y9 119 aa8.65□□□□□ -1.02
TNFRSF1A-211ENST00000538363 IGHV1-3A0A0C4DH29 117 aa8.65□□□□□ -1.02
TNFRSF1A-211ENST00000538363 C7orf66A4D0T2 115 aa8.65□□□□□ -1.02
TNFRSF1A-211ENST00000538363 LINC00473A8K010 186 aa8.65□□□□□ -1.02
TNFRSF1A-211ENST00000538363 A8MV72 311 aaPredicted RBP8.65□□□□□ -1.02
TNFRSF1A-211ENST00000538363 CCNKO75909 580 aa8.65□□□□□ -1.02
TNFRSF1A-211ENST00000538363 KRASP01116 189 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms