RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 CXorf1O96002 111 aa4.56□□□□□ -1.68
LRP6-203ENST00000538239 GBGT1Q8N5D6 347 aa4.56□□□□□ -1.68
LRP6-203ENST00000538239 PTX4Q96A99 478 aa4.56□□□□□ -1.68
LRP6-203ENST00000538239 ZNF586Q9NXT0 402 aa4.56□□□□□ -1.68
LRP6-203ENST00000538239 METRNQ9UJH8 293 aa4.56□□□□□ -1.68
LRP6-203ENST00000538239 NEUROG3Q9Y4Z2 214 aa4.56□□□□□ -1.68
LRP6-203ENST00000538239 OR2T8A6NH00 312 aa4.56□□□□□ -1.68
LRP6-203ENST00000538239 ZNF207O43670 478 aaKnown RBP4.56□□□□□ -1.68
LRP6-203ENST00000538239 ICMTO60725 284 aa4.56□□□□□ -1.68
LRP6-203ENST00000538239 VDAC2P45880 294 aaPredicted RBP4.56□□□□□ -1.68
LRP6-203ENST00000538239 RND2P52198 227 aa4.56□□□□□ -1.68
LRP6-203ENST00000538239 C11orf44Q8N8P7 122 aa4.56□□□□□ -1.68
LRP6-203ENST00000538239 RAX2Q96IS3 184 aa4.56□□□□□ -1.68
LRP6-203ENST00000538239 LURAP1Q96LR2 239 aa4.56□□□□□ -1.68
LRP6-203ENST00000538239 WFIKKN1Q96NZ8 548 aa4.56□□□□□ -1.68
LRP6-203ENST00000538239 ARPC4-TTLL3A0A0A6YYG9 625 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 IGSF23A1L1A6 192 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 SNCGO76070 127 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 USF1P22415 310 aaPredicted RBP4.55□□□□□ -1.68
LRP6-203ENST00000538239 PTTG1IPP53801 180 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 IZUMO4Q1ZYL8 232 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 LGALSLQ3ZCW2 172 aaPredicted RBP4.55□□□□□ -1.68
LRP6-203ENST00000538239 OR4X2Q8NGF9 303 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 ZNF107Q9UII5 783 aaPredicted RBP4.55□□□□□ -1.68
LRP6-203ENST00000538239 IGHV3OR16-13A0A075B7E8 117 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 IGHV3-74A0A0B4J1X5 117 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 UBE2L6O14933 153 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 CD1AP06126 327 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 ZNF735P0CB33 412 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 AANATQ16613 207 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 TMEM78Q5T7P6 136 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 SPANXN1Q5VSR9 72 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 QTRT1Q9BXR0 403 aaKnown RBP4.55□□□□□ -1.68
LRP6-203ENST00000538239 PXMP4Q9Y6I8 212 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 RLFQ13129 1914 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 IGHV3-49A0A0A0MS15 119 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 FAM90A10PA6NDY2 464 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 FAM90A18PA6NE21 464 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 FAM90A16PA6NEW6 464 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 FAM90A20PA6NIJ5 464 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 FAM90A8PA6NJQ4 464 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 FAM90A7PA6NKC0 464 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 FAM90A22PA8MWA6 464 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 FAM90A12PA8MX19 464 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 FAM90A5PA8MXJ8 464 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 FAM90A23PA8MXZ1 464 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 FCN1O00602 326 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 FAM90A15PP0C7V4 464 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 FAM90A13PP0C7W8 464 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 FAM90A14PP0C7W9 464 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 FAM90A24PP0C7X0 464 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 LINC00869P0C866 280 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 SPCS3P61009 180 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 NHLH2Q02577 135 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 LINC01590Q5TEZ4 76 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 ABLIM2Q6H8Q1 611 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 LDLRAD3Q86YD5 345 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 DDB2Q92466 427 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 RHOVQ96L33 236 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 Q96M66 194 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 FBXL15Q9H469 300 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 SEMA5BQ9P283 1151 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 A0A0G2JNJ9 132 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 RBFOX3A6NFN3 312 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 DEDDO75618 318 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 LRRC75BQ2VPJ9 315 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 C1QTNF12Q5T7M4 302 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 SLC35E4Q6ICL7 350 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 FGFRL1Q8N441 504 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 Q9UFV3 132 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 TRBV5-7A0A0A0MS05 114 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 CORTO00230 105 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 HSBP1O75506 76 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 TWIST1Q15672 202 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 SELENOHQ8IZQ5 122 aaKnown RBP4.55□□□□□ -1.68
LRP6-203ENST00000538239 COMMD1Q8N668 190 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 ELOVL1Q9BW60 279 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 SRD5A3Q9H8P0 318 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 NPVFQ9HCQ7 196 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 CABIN1Q9Y6J0 2220 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 CDS2O95674 445 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 RELQ04864 619 aaPredicted RBP4.55□□□□□ -1.68
LRP6-203ENST00000538239 PRR30Q53SZ7 412 aaPredicted RBP4.55□□□□□ -1.68
LRP6-203ENST00000538239 PRSS33Q8NF86 280 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 MARVELD1Q9BSK0 173 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 AURKAIP1Q9NWT8 199 aaPredicted RBP4.55□□□□□ -1.68
LRP6-203ENST00000538239 TMEM56-RWDD3S4R434 201 aa4.55□□□□□ -1.68
LRP6-203ENST00000538239 HELTA6NFD8 242 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 TBX6O95947 436 aaPredicted RBP4.54□□□□□ -1.68
LRP6-203ENST00000538239 OR5AL1P0C617 328 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 CXCL3P19876 107 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 CSRP3P50461 194 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 RAG2P55895 527 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 ASPHD2Q6ICH7 369 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 FDX2Q6P4F2 183 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 ZNF818PQ6ZRF7 136 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 SLC35E3Q7Z769 313 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 TMEM37Q8WXS4 190 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 GPR146Q96CH1 333 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 SIP14410 1827 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms