RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 NDUFS8O00217 210 aa5.92□□□□□ -1.46
MSH6-209ENST00000538136 CREBL2O60519 120 aaPredicted RBP5.92□□□□□ -1.46
MSH6-209ENST00000538136 IGHV4-31P0DP07 118 aa5.92□□□□□ -1.46
MSH6-209ENST00000538136 CFHR2P36980 270 aa5.92□□□□□ -1.46
MSH6-209ENST00000538136 ANKRD55Q3KP44 614 aa5.92□□□□□ -1.46
MSH6-209ENST00000538136 ACTBL2Q562R1 376 aa5.92□□□□□ -1.46
MSH6-209ENST00000538136 ZNF626Q68DY1 528 aa5.92□□□□□ -1.46
MSH6-209ENST00000538136 SNAPC3Q92966 411 aa5.92□□□□□ -1.46
MSH6-209ENST00000538136 CLEC5AQ9NY25 188 aa5.92□□□□□ -1.46
MSH6-209ENST00000538136 PIPOXQ9P0Z9 390 aa5.92□□□□□ -1.46
MSH6-209ENST00000538136 LINC00312Q9Y6C7 94 aa5.92□□□□□ -1.46
MSH6-209ENST00000538136 NUP210LQ5VU65 1888 aa5.91□□□□□ -1.46
MSH6-209ENST00000538136 IGHV2-70DA0A0C4DH43 119 aa5.91□□□□□ -1.46
MSH6-209ENST00000538136 C17orf98A8MV24 154 aa5.91□□□□□ -1.46
MSH6-209ENST00000538136 GPR31O00270 319 aa5.91□□□□□ -1.46
MSH6-209ENST00000538136 MRPS14O60783 128 aaKnown RBP5.91□□□□□ -1.46
MSH6-209ENST00000538136 FBXO24O75426 580 aa5.91□□□□□ -1.46
MSH6-209ENST00000538136 CTXN2P0C2S0 81 aa5.91□□□□□ -1.46
MSH6-209ENST00000538136 IL13RA2Q14627 380 aa5.91□□□□□ -1.46
MSH6-209ENST00000538136 CT45A1Q5HYN5 189 aa5.91□□□□□ -1.46
MSH6-209ENST00000538136 CT45A3Q8NHU0 189 aa5.91□□□□□ -1.46
MSH6-209ENST00000538136 NARS2Q96I59 477 aaKnown RBP5.91□□□□□ -1.46
MSH6-209ENST00000538136 HYLS1Q96M11 299 aa5.91□□□□□ -1.46
MSH6-209ENST00000538136 NPFFR1Q9GZQ6 430 aa5.91□□□□□ -1.46
MSH6-209ENST00000538136 ISYNA1Q9NPH2 558 aa5.91□□□□□ -1.46
MSH6-209ENST00000538136 SLC2A9Q9NRM0 540 aa5.91□□□□□ -1.46
MSH6-209ENST00000538136 RASL12Q9NYN1 266 aa5.91□□□□□ -1.46
MSH6-209ENST00000538136 RABAC1Q9UI14 185 aa5.91□□□□□ -1.46
MSH6-209ENST00000538136 TCRBV4S1A1TA0A5B7 111 aa5.91□□□□□ -1.46
MSH6-209ENST00000538136 ZNF729A6NN14 1252 aaPredicted RBP5.91□□□□□ -1.46
MSH6-209ENST00000538136 TMEM14DPA8MWL7 114 aa5.91□□□□□ -1.46
MSH6-209ENST00000538136 S1PR2O95136 353 aa5.91□□□□□ -1.46
MSH6-209ENST00000538136 IGHV2-70P01814 119 aa5.91□□□□□ -1.46
MSH6-209ENST00000538136 TRGV3P03979 118 aa5.91□□□□□ -1.46
MSH6-209ENST00000538136 IGKV1-16P04430 117 aa5.91□□□□□ -1.46
MSH6-209ENST00000538136 PVALBP20472 110 aaPredicted RBP5.91□□□□□ -1.46
MSH6-209ENST00000538136 DTYMKP23919 212 aa5.91□□□□□ -1.46
MSH6-209ENST00000538136 LYZL2Q7Z4W2 148 aa5.91□□□□□ -1.46
MSH6-209ENST00000538136 FAM169BQ8N8A8 192 aa5.91□□□□□ -1.46
MSH6-209ENST00000538136 OR10Z1Q8NGY1 313 aa5.91□□□□□ -1.46
MSH6-209ENST00000538136 MRPL30Q8TCC3 161 aaKnown RBP5.91□□□□□ -1.46
MSH6-209ENST00000538136 IGHV3OR16-12A0A075B7B8 117 aa5.91□□□□□ -1.46
MSH6-209ENST00000538136 IGHV1-69DA0A0B4J2H0 117 aa5.91□□□□□ -1.46
MSH6-209ENST00000538136 OR5H14A6NHG9 310 aa5.91□□□□□ -1.46
MSH6-209ENST00000538136 RNASEK-C17orf49H0YIS7 233 aa5.91□□□□□ -1.46
MSH6-209ENST00000538136 H3BTX0 84 aa5.91□□□□□ -1.46
MSH6-209ENST00000538136 ARPC5O15511 151 aa5.91□□□□□ -1.46
MSH6-209ENST00000538136 IGHV1-69P01742 117 aa5.91□□□□□ -1.46
MSH6-209ENST00000538136 LOXL3P58215 753 aa5.91□□□□□ -1.46
MSH6-209ENST00000538136 ZNF45Q02386 682 aa5.91□□□□□ -1.46
MSH6-209ENST00000538136 HSD17B11Q8NBQ5 300 aa5.91□□□□□ -1.46
MSH6-209ENST00000538136 MINDY2Q8NBR6 621 aa5.91□□□□□ -1.46
MSH6-209ENST00000538136 OR2T35Q8NGX2 323 aa5.91□□□□□ -1.46
MSH6-209ENST00000538136 THAP6Q8TBB0 222 aa5.91□□□□□ -1.46
MSH6-209ENST00000538136 NBEAL2Q6ZNJ1 2754 aa5.91□□□□□ -1.46
MSH6-209ENST00000538136 CENPVL3A0A0U1RRI6 287 aa5.9□□□□□ -1.46
MSH6-209ENST00000538136 CGB1A6NKQ9 187 aa5.9□□□□□ -1.46
MSH6-209ENST00000538136 RAMP3O60896 148 aa5.9□□□□□ -1.46
MSH6-209ENST00000538136 TCRBP04435 133 aa5.9□□□□□ -1.46
MSH6-209ENST00000538136 CLEC3BP05452 202 aa5.9□□□□□ -1.46
MSH6-209ENST00000538136 RAB7AP51149 207 aa5.9□□□□□ -1.46
MSH6-209ENST00000538136 ZP1P60852 638 aa5.9□□□□□ -1.46
MSH6-209ENST00000538136 ACSM1Q08AH1 577 aa5.9□□□□□ -1.46
MSH6-209ENST00000538136 MSMO1Q15800 293 aa5.9□□□□□ -1.46
MSH6-209ENST00000538136 SRSF7Q16629 238 aaKnown RBP eCLIP5.9□□□□□ -1.46
MSH6-209ENST00000538136 FDX2Q6P4F2 183 aa5.9□□□□□ -1.46
MSH6-209ENST00000538136 ZNF818PQ6ZRF7 136 aa5.9□□□□□ -1.46
MSH6-209ENST00000538136 MFSD4AQ8N468 514 aa5.9□□□□□ -1.46
MSH6-209ENST00000538136 ZNF709Q8N972 641 aa5.9□□□□□ -1.46
MSH6-209ENST00000538136 GSX2Q9BZM3 304 aa5.9□□□□□ -1.46
MSH6-209ENST00000538136 PLEKHA3Q9HB20 300 aa5.9□□□□□ -1.46
MSH6-209ENST00000538136 Q9N2K0 584 aa5.9□□□□□ -1.46
MSH6-209ENST00000538136 GOSR1O95249 250 aa5.9□□□□□ -1.46
MSH6-209ENST00000538136 ADH4P08319 380 aa5.9□□□□□ -1.46
MSH6-209ENST00000538136 ELLP55199 621 aaPredicted RBP5.9□□□□□ -1.46
MSH6-209ENST00000538136 PPP1R1AQ13522 171 aa5.9□□□□□ -1.46
MSH6-209ENST00000538136 ZNF260Q3ZCT1 412 aa5.9□□□□□ -1.46
MSH6-209ENST00000538136 C1orf100Q5SVJ3 147 aa5.9□□□□□ -1.46
MSH6-209ENST00000538136 C12orf45Q8N5I9 185 aaPredicted RBP5.9□□□□□ -1.46
MSH6-209ENST00000538136 WFDC12Q8WWY7 111 aa5.9□□□□□ -1.46
MSH6-209ENST00000538136 HIPK2Q9H2X6 1198 aa5.9□□□□□ -1.46
MSH6-209ENST00000538136 HRASP01112 189 aa5.9□□□□□ -1.47
MSH6-209ENST00000538136 METTL15P1P0C7V9 234 aa5.9□□□□□ -1.47
MSH6-209ENST00000538136 ORM2P19652 201 aa5.9□□□□□ -1.47
MSH6-209ENST00000538136 POLR2GP62487 172 aaKnown RBP eCLIP5.9□□□□□ -1.47
MSH6-209ENST00000538136 SLC35E4Q6ICL7 350 aa5.9□□□□□ -1.47
MSH6-209ENST00000538136 DCUN1D4Q92564 292 aa5.9□□□□□ -1.47
MSH6-209ENST00000538136 HES4Q9HCC6 221 aa5.9□□□□□ -1.47
MSH6-209ENST00000538136 PPP1R14DQ9NXH3 145 aa5.9□□□□□ -1.47
MSH6-209ENST00000538136 AGPAT2O15120 278 aa5.89□□□□□ -1.47
MSH6-209ENST00000538136 IL5P05113 134 aa5.89□□□□□ -1.47
MSH6-209ENST00000538136 CD37P11049 281 aa5.89□□□□□ -1.47
MSH6-209ENST00000538136 VDAC2P45880 294 aaPredicted RBP5.89□□□□□ -1.47
MSH6-209ENST00000538136 ERHP84090 104 aaKnown RBP5.89□□□□□ -1.47
MSH6-209ENST00000538136 TMEM267Q0VDI3 215 aaPredicted RBP5.89□□□□□ -1.47
MSH6-209ENST00000538136 RBMS2Q15434 407 aaKnown RBP5.89□□□□□ -1.47
MSH6-209ENST00000538136 MORN2Q502X0 79 aa5.89□□□□□ -1.47
MSH6-209ENST00000538136 BIVMQ86UB2 503 aa5.89□□□□□ -1.47
MSH6-209ENST00000538136 HAPLN4Q86UW8 402 aa5.89□□□□□ -1.47
MSH6-209ENST00000538136 THNSL2Q86YJ6 484 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms