RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 OR10J5Q8NHC4 309 aa8.99□□□□□ -0.97
CLIP1-210ENST00000538120 Q8WTZ3 238 aa8.99□□□□□ -0.97
CLIP1-210ENST00000538120 TMEM56Q96MV1 263 aa8.99□□□□□ -0.97
CLIP1-210ENST00000538120 DUSP13Q9UII6 198 aa8.99□□□□□ -0.97
CLIP1-210ENST00000538120 TMEM56-RWDD3S4R434 201 aa8.99□□□□□ -0.97
CLIP1-210ENST00000538120 ATMQ13315 3056 aa8.99□□□□□ -0.97
CLIP1-210ENST00000538120 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.99□□□□□ -0.97
CLIP1-210ENST00000538120 PRRG2O14669 202 aa8.99□□□□□ -0.97
CLIP1-210ENST00000538120 PGLYRP1O75594 196 aaPredicted RBP8.99□□□□□ -0.97
CLIP1-210ENST00000538120 IGLV2-14P01704 120 aa8.99□□□□□ -0.97
CLIP1-210ENST00000538120 IGHV3-13P01766 116 aa8.99□□□□□ -0.97
CLIP1-210ENST00000538120 LORP23490 312 aaPredicted RBP8.99□□□□□ -0.97
CLIP1-210ENST00000538120 GLRXP35754 106 aa8.99□□□□□ -0.97
CLIP1-210ENST00000538120 CD200P41217 278 aa8.99□□□□□ -0.97
CLIP1-210ENST00000538120 RAB2AP61019 212 aa8.99□□□□□ -0.97
CLIP1-210ENST00000538120 PDZD11Q5EBL8 140 aa8.99□□□□□ -0.97
CLIP1-210ENST00000538120 CXorf66Q5JRM2 361 aaPredicted RBP8.99□□□□□ -0.97
CLIP1-210ENST00000538120 GFI1BQ5VTD9 330 aa8.99□□□□□ -0.97
CLIP1-210ENST00000538120 SPNS3Q6ZMD2 512 aa8.99□□□□□ -0.97
CLIP1-210ENST00000538120 C1QL4Q86Z23 238 aa8.99□□□□□ -0.97
CLIP1-210ENST00000538120 SELENOHQ8IZQ5 122 aaKnown RBP8.99□□□□□ -0.97
CLIP1-210ENST00000538120 UBALD1Q8TB05 177 aa8.99□□□□□ -0.97
CLIP1-210ENST00000538120 SNRNP40Q96DI7 357 aaKnown RBP8.99□□□□□ -0.97
CLIP1-210ENST00000538120 C11orf1Q9H5F2 150 aa8.99□□□□□ -0.97
CLIP1-210ENST00000538120 DOK5Q9P104 306 aa8.99□□□□□ -0.97
CLIP1-210ENST00000538120 TAAR3PQ9P1P4 343 aa8.99□□□□□ -0.97
CLIP1-210ENST00000538120 ERRFI1Q9UJM3 462 aaPredicted RBP8.99□□□□□ -0.97
CLIP1-210ENST00000538120 TRAPPC2LQ9UL33 140 aa8.99□□□□□ -0.97
CLIP1-210ENST00000538120 TGIF2-C20orf24A0A0A6YYL0 155 aa8.98□□□□□ -0.97
CLIP1-210ENST00000538120 SSSCA1O60232 199 aa8.98□□□□□ -0.97
CLIP1-210ENST00000538120 CST7O76096 145 aa8.98□□□□□ -0.97
CLIP1-210ENST00000538120 LY86O95711 162 aa8.98□□□□□ -0.97
CLIP1-210ENST00000538120 CRYAAP02489 173 aa8.98□□□□□ -0.97
CLIP1-210ENST00000538120 GNMTQ14749 295 aa8.98□□□□□ -0.97
CLIP1-210ENST00000538120 ELOBQ15370 118 aa8.98□□□□□ -0.97
CLIP1-210ENST00000538120 GFRALQ6UXV0 394 aa8.98□□□□□ -0.97
CLIP1-210ENST00000538120 ODF3L1Q8IXM7 274 aa8.98□□□□□ -0.97
CLIP1-210ENST00000538120 TMEM217Q8N7C4 229 aa8.98□□□□□ -0.97
CLIP1-210ENST00000538120 RNF152Q8N8N0 203 aa8.98□□□□□ -0.97
CLIP1-210ENST00000538120 CYB561D1Q8N8Q1 229 aa8.98□□□□□ -0.97
CLIP1-210ENST00000538120 OR2Z1Q8NG97 314 aa8.98□□□□□ -0.97
CLIP1-210ENST00000538120 IL1F10Q8WWZ1 152 aa8.98□□□□□ -0.97
CLIP1-210ENST00000538120 TNFSF12O43508 249 aa8.98□□□□□ -0.97
CLIP1-210ENST00000538120 TMEM50AO95807 157 aa8.98□□□□□ -0.97
CLIP1-210ENST00000538120 SRP19P09132 144 aaKnown RBP8.98□□□□□ -0.97
CLIP1-210ENST00000538120 EGR1P18146 543 aa8.98□□□□□ -0.97
CLIP1-210ENST00000538120 CDX1P47902 265 aaPredicted RBP8.98□□□□□ -0.97
CLIP1-210ENST00000538120 GNG10P50151 68 aa8.98□□□□□ -0.97
CLIP1-210ENST00000538120 DLK1P80370 383 aa8.98□□□□□ -0.97
CLIP1-210ENST00000538120 COQ2Q96H96 371 aa8.98□□□□□ -0.97
CLIP1-210ENST00000538120 TMED3Q9Y3Q3 217 aa8.98□□□□□ -0.97
CLIP1-210ENST00000538120 IGLV3-9A0A075B6K5 115 aa8.97□□□□□ -0.97
CLIP1-210ENST00000538120 CDS2O95674 445 aa8.97□□□□□ -0.97
CLIP1-210ENST00000538120 FAM87AP0C7U9 286 aa8.97□□□□□ -0.97
CLIP1-210ENST00000538120 STAG3L3P0CL85 134 aa8.97□□□□□ -0.97
CLIP1-210ENST00000538120 UCP1P25874 307 aa8.97□□□□□ -0.97
CLIP1-210ENST00000538120 OR3A1P47881 315 aa8.97□□□□□ -0.97
CLIP1-210ENST00000538120 UBE2KP61086 200 aa8.97□□□□□ -0.97
CLIP1-210ENST00000538120 MRGPRGQ86SM5 289 aa8.97□□□□□ -0.97
CLIP1-210ENST00000538120 CD177Q8N6Q3 437 aa8.97□□□□□ -0.97
CLIP1-210ENST00000538120 ZNF383Q8NA42 475 aa8.97□□□□□ -0.97
CLIP1-210ENST00000538120 LFNGQ8NES3 379 aa8.97□□□□□ -0.97
CLIP1-210ENST00000538120 OR10V1Q8NGI7 309 aa8.97□□□□□ -0.97
CLIP1-210ENST00000538120 OR5C1Q8NGR4 320 aa8.97□□□□□ -0.97
CLIP1-210ENST00000538120 LRRC29Q8WV35 223 aa8.97□□□□□ -0.97
CLIP1-210ENST00000538120 PFDN5Q99471 154 aa8.97□□□□□ -0.97
CLIP1-210ENST00000538120 UBE2J1Q9Y385 318 aaPredicted RBP8.97□□□□□ -0.97
CLIP1-210ENST00000538120 A0A1B0GW64 132 aa8.97□□□□□ -0.97
CLIP1-210ENST00000538120 TMEM30CPA0ZSE6 113 aa8.97□□□□□ -0.97
CLIP1-210ENST00000538120 RNF224P0DH78 156 aa8.97□□□□□ -0.97
CLIP1-210ENST00000538120 NKX2-1P43699 371 aaPredicted RBP8.97□□□□□ -0.97
CLIP1-210ENST00000538120 SRPXP78539 464 aa8.97□□□□□ -0.97
CLIP1-210ENST00000538120 COL10A1Q03692 680 aa8.97□□□□□ -0.97
CLIP1-210ENST00000538120 AESQ08117 197 aa8.97□□□□□ -0.97
CLIP1-210ENST00000538120 ICAM4Q14773 271 aa8.97□□□□□ -0.97
CLIP1-210ENST00000538120 SLC35E4Q6ICL7 350 aa8.97□□□□□ -0.97
CLIP1-210ENST00000538120 FAM53AQ6NSI3 398 aaPredicted RBP8.97□□□□□ -0.97
CLIP1-210ENST00000538120 TMEM252Q8N6L7 170 aa8.97□□□□□ -0.97
CLIP1-210ENST00000538120 JKAMPQ9P055 326 aa8.97□□□□□ -0.97
CLIP1-210ENST00000538120 H0Y980 276 aa8.96□□□□□ -0.97
CLIP1-210ENST00000538120 IFNL4K9M1U5 179 aa8.96□□□□□ -0.97
CLIP1-210ENST00000538120 HIST1H2BKO60814 126 aa8.96□□□□□ -0.97
CLIP1-210ENST00000538120 HIST1H2BJP06899 126 aa8.96□□□□□ -0.97
CLIP1-210ENST00000538120 HIST1H2BOP23527 126 aa8.96□□□□□ -0.97
CLIP1-210ENST00000538120 CD40P25942 277 aa8.96□□□□□ -0.97
CLIP1-210ENST00000538120 HIST1H2BBP33778 126 aa8.96□□□□□ -0.97
CLIP1-210ENST00000538120 DYNLT3P51808 116 aa8.96□□□□□ -0.97
CLIP1-210ENST00000538120 KLF3P57682 345 aaPredicted RBP8.96□□□□□ -0.97
CLIP1-210ENST00000538120 HIST1H2BDP58876 126 aa8.96□□□□□ -0.97
CLIP1-210ENST00000538120 HIST1H2BCP62807 126 aa8.96□□□□□ -0.97
CLIP1-210ENST00000538120 HIST2H2BEQ16778 126 aa8.96□□□□□ -0.97
CLIP1-210ENST00000538120 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.96□□□□□ -0.97
CLIP1-210ENST00000538120 ZNF429Q86V71 674 aa8.96□□□□□ -0.97
CLIP1-210ENST00000538120 OR1L1Q8NH94 360 aa8.96□□□□□ -0.97
CLIP1-210ENST00000538120 HIST1H2BHQ93079 126 aa8.96□□□□□ -0.97
CLIP1-210ENST00000538120 MEGF10Q96KG7 1140 aa8.96□□□□□ -0.97
CLIP1-210ENST00000538120 HIST1H2BNQ99877 126 aa8.96□□□□□ -0.97
CLIP1-210ENST00000538120 HIST1H2BMQ99879 126 aa8.96□□□□□ -0.97
CLIP1-210ENST00000538120 CUL9Q8IWT3 2517 aa8.96□□□□□ -0.97
CLIP1-210ENST00000538120 CEP295Q9C0D2 2601 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms