RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 IFI27L2Q9H2X8 130 aa12.98□□□□□ -0.33
MKS1-204ENST00000537529 CLN8Q9UBY8 286 aa12.98□□□□□ -0.33
MKS1-204ENST00000537529 KBTBD11-OT1A0A1B0GTJ5 212 aa12.98□□□□□ -0.33
MKS1-204ENST00000537529 FAM90A9PA6NNJ1 464 aa12.98□□□□□ -0.33
MKS1-204ENST00000537529 RBFOX2O43251 390 aaKnown RBP eCLIP12.98□□□□□ -0.33
MKS1-204ENST00000537529 FCGR3BO75015 233 aa12.98□□□□□ -0.33
MKS1-204ENST00000537529 HPRT1P00492 218 aa12.98□□□□□ -0.33
MKS1-204ENST00000537529 CD55P08174 381 aa12.98□□□□□ -0.33
MKS1-204ENST00000537529 CCL20P78556 96 aa12.98□□□□□ -0.33
MKS1-204ENST00000537529 ADIPOQQ15848 244 aa12.98□□□□□ -0.33
MKS1-204ENST00000537529 ATP6V1FQ16864 119 aa12.98□□□□□ -0.33
MKS1-204ENST00000537529 C17orf58Q2M2W7 97 aa12.98□□□□□ -0.33
MKS1-204ENST00000537529 TEX36Q5VZQ5 186 aa12.98□□□□□ -0.33
MKS1-204ENST00000537529 OR8G2PQ6IF36 304 aa12.98□□□□□ -0.33
MKS1-204ENST00000537529 DEFB108BQ8NET1 73 aa12.98□□□□□ -0.33
MKS1-204ENST00000537529 SFT2D1Q8WV19 159 aa12.98□□□□□ -0.33
MKS1-204ENST00000537529 OR4C12Q96R67 309 aa12.98□□□□□ -0.33
MKS1-204ENST00000537529 WDR61Q9GZS3 305 aaKnown RBP12.98□□□□□ -0.33
MKS1-204ENST00000537529 GFOD1Q9NXC2 390 aa12.98□□□□□ -0.33
MKS1-204ENST00000537529 PRELID3BQ9Y3B1 194 aa12.98□□□□□ -0.33
MKS1-204ENST00000537529 CEBPZOSA8MTT3 80 aa12.97□□□□□ -0.33
MKS1-204ENST00000537529 LINC00205P59089 165 aa12.97□□□□□ -0.33
MKS1-204ENST00000537529 SERF2P84101 59 aa12.97□□□□□ -0.33
MKS1-204ENST00000537529 ZNF788Q6ZQV5 615 aa12.97□□□□□ -0.33
MKS1-204ENST00000537529 CCL13Q99616 98 aa12.97□□□□□ -0.33
MKS1-204ENST00000537529 GAB2Q9UQC2 676 aa12.97□□□□□ -0.33
MKS1-204ENST00000537529 CEP250Q9BV73 2442 aa12.97□□□□□ -0.33
MKS1-204ENST00000537529 TRAV1-1A0A0B4J248 108 aa12.97□□□□□ -0.33
MKS1-204ENST00000537529 UBE2L5PA0A1B0GUS4 154 aa12.97□□□□□ -0.33
MKS1-204ENST00000537529 NKX6-3A6NJ46 265 aa12.97□□□□□ -0.33
MKS1-204ENST00000537529 PROP1O75360 226 aa12.97□□□□□ -0.33
MKS1-204ENST00000537529 GYPAP02724 150 aa12.97□□□□□ -0.33
MKS1-204ENST00000537529 NFYBP25208 207 aa12.97□□□□□ -0.33
MKS1-204ENST00000537529 ERVK-16P61578 105 aa12.97□□□□□ -0.33
MKS1-204ENST00000537529 TMEM30BQ3MIR4 351 aa12.97□□□□□ -0.33
MKS1-204ENST00000537529 RPL39P5Q59GN2 51 aa12.97□□□□□ -0.33
MKS1-204ENST00000537529 SP5Q6BEB4 398 aaPredicted RBP12.97□□□□□ -0.33
MKS1-204ENST00000537529 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.97□□□□□ -0.33
MKS1-204ENST00000537529 RND1Q92730 232 aa12.97□□□□□ -0.33
MKS1-204ENST00000537529 TMEM147Q9BVK8 224 aa12.97□□□□□ -0.33
MKS1-204ENST00000537529 MSRB2Q9Y3D2 182 aa12.97□□□□□ -0.33
MKS1-204ENST00000537529 PRRC2CQ9Y520 2896 aaKnown RBP12.96□□□□□ -0.33
MKS1-204ENST00000537529 FRYQ5TBA9 3013 aa12.96□□□□□ -0.33
MKS1-204ENST00000537529 AKAP13Q12802 2813 aa12.96□□□□□ -0.33
MKS1-204ENST00000537529 C17orf100A8MU93 164 aa12.96□□□□□ -0.33
MKS1-204ENST00000537529 VSTM5A8MXK1 200 aa12.96□□□□□ -0.33
MKS1-204ENST00000537529 ZG16O60844 167 aa12.96□□□□□ -0.33
MKS1-204ENST00000537529 SCAF4O95104 1147 aaKnown RBP12.96□□□□□ -0.33
MKS1-204ENST00000537529 LY86O95711 162 aa12.96□□□□□ -0.33
MKS1-204ENST00000537529 DUX4L9Q6RFH8 374 aaPredicted RBP12.96□□□□□ -0.33
MKS1-204ENST00000537529 TAF15Q92804 592 aaKnown RBP eCLIP12.96□□□□□ -0.33
MKS1-204ENST00000537529 PINX1Q96BK5 328 aaKnown RBP12.96□□□□□ -0.33
MKS1-204ENST00000537529 S1PR3Q99500 378 aa12.96□□□□□ -0.33
MKS1-204ENST00000537529 RARRES2Q99969 163 aa12.96□□□□□ -0.33
MKS1-204ENST00000537529 UNKLQ9H9P5 680 aaKnown RBP12.96□□□□□ -0.33
MKS1-204ENST00000537529 NGBQ9NPG2 151 aa12.96□□□□□ -0.33
MKS1-204ENST00000537529 SMCO4Q9NRQ5 59 aa12.96□□□□□ -0.33
MKS1-204ENST00000537529 TIMM9Q9Y5J7 89 aa12.96□□□□□ -0.33
MKS1-204ENST00000537529 ZNF729A6NN14 1252 aaPredicted RBP12.95□□□□□ -0.34
MKS1-204ENST00000537529 ZNF134P52741 427 aa12.95□□□□□ -0.34
MKS1-204ENST00000537529 TMPRSS3P57727 454 aa12.95□□□□□ -0.34
MKS1-204ENST00000537529 CCL8P80075 99 aa12.95□□□□□ -0.34
MKS1-204ENST00000537529 HFEQ30201 348 aa12.95□□□□□ -0.34
MKS1-204ENST00000537529 PRAMEF5Q5TYX0 476 aa12.95□□□□□ -0.34
MKS1-204ENST00000537529 FAM216BQ8N7L0 139 aa12.95□□□□□ -0.34
MKS1-204ENST00000537529 ZDHHC16Q969W1 377 aa12.95□□□□□ -0.34
MKS1-204ENST00000537529 IDI2-AS1Q9NZ38 188 aa12.95□□□□□ -0.34
MKS1-204ENST00000537529 H7C2Y5 167 aa12.95□□□□□ -0.34
MKS1-204ENST00000537529 SLC31A2O15432 143 aa12.95□□□□□ -0.34
MKS1-204ENST00000537529 IGHV3-7P01780 117 aa12.95□□□□□ -0.34
MKS1-204ENST00000537529 FAM87AP0C7U9 286 aa12.95□□□□□ -0.34
MKS1-204ENST00000537529 OR13C7P0DN81 318 aa12.95□□□□□ -0.34
MKS1-204ENST00000537529 HAGHQ16775 308 aa12.95□□□□□ -0.34
MKS1-204ENST00000537529 AARDQ4LEZ3 155 aa12.95□□□□□ -0.34
MKS1-204ENST00000537529 AKIRIN2Q53H80 203 aa12.95□□□□□ -0.34
MKS1-204ENST00000537529 AWAT1Q58HT5 328 aa12.95□□□□□ -0.34
MKS1-204ENST00000537529 TMEM41BQ5BJD5 291 aa12.95□□□□□ -0.34
MKS1-204ENST00000537529 SOHLH1Q5JUK2 328 aa12.95□□□□□ -0.34
MKS1-204ENST00000537529 ZNF506Q5JVG8 444 aa12.95□□□□□ -0.34
MKS1-204ENST00000537529 OR10P1Q8NGE3 313 aa12.95□□□□□ -0.34
MKS1-204ENST00000537529 QTRT1Q9BXR0 403 aaKnown RBP12.95□□□□□ -0.34
MKS1-204ENST00000537529 EGLN1Q9GZT9 426 aa12.95□□□□□ -0.34
MKS1-204ENST00000537529 RPRMQ9NS64 109 aa12.95□□□□□ -0.34
MKS1-204ENST00000537529 M0R036 132 aa12.94□□□□□ -0.34
MKS1-204ENST00000537529 OR9G9P0C7N8 305 aa12.94□□□□□ -0.34
MKS1-204ENST00000537529 ADAM5Q6NVV9 412 aa12.94□□□□□ -0.34
MKS1-204ENST00000537529 TCF23Q7RTU1 214 aa12.94□□□□□ -0.34
MKS1-204ENST00000537529 OR4S2Q8NH73 311 aa12.94□□□□□ -0.34
MKS1-204ENST00000537529 CORO2AQ92828 525 aa12.94□□□□□ -0.34
MKS1-204ENST00000537529 CLCC1Q96S66 551 aa12.94□□□□□ -0.34
MKS1-204ENST00000537529 VKORC1Q9BQB6 163 aa12.94□□□□□ -0.34
MKS1-204ENST00000537529 LINC00574Q9H8X3 128 aa12.94□□□□□ -0.34
MKS1-204ENST00000537529 RPS10P5Q9NQ39 176 aa12.94□□□□□ -0.34
MKS1-204ENST00000537529 ZFHX4Q86UP3 3567 aa12.94□□□□□ -0.34
MKS1-204ENST00000537529 NQO2P16083 231 aa12.93□□□□□ -0.34
MKS1-204ENST00000537529 THBS3P49746 956 aa12.93□□□□□ -0.34
MKS1-204ENST00000537529 OR2B8PP59922 312 aa12.93□□□□□ -0.34
MKS1-204ENST00000537529 ICAM4Q14773 271 aa12.93□□□□□ -0.34
MKS1-204ENST00000537529 CT45A1Q5HYN5 189 aa12.93□□□□□ -0.34
MKS1-204ENST00000537529 OR4A16Q8NH70 328 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms