RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 H2BFWTQ7Z2G1 175 aa11.97□□□□□ -0.49
USP44-203ENST00000537435 OR10G9Q8NGN4 311 aa11.97□□□□□ -0.49
USP44-203ENST00000537435 OR10G7Q8NGN6 311 aa11.97□□□□□ -0.49
USP44-203ENST00000537435 RFESDQ8TAC1 157 aa11.97□□□□□ -0.49
USP44-203ENST00000537435 MSL2Q9HCI7 577 aa11.97□□□□□ -0.49
USP44-203ENST00000537435 NAT8Q9UHE5 227 aa11.97□□□□□ -0.49
USP44-203ENST00000537435 LINC00473A8K010 186 aa11.97□□□□□ -0.49
USP44-203ENST00000537435 DEFB108AA8MXU0 73 aa11.97□□□□□ -0.49
USP44-203ENST00000537435 M0R296 226 aa11.97□□□□□ -0.49
USP44-203ENST00000537435 ST8SIA5O15466 376 aa11.97□□□□□ -0.49
USP44-203ENST00000537435 IGHG3P01860 377 aa11.97□□□□□ -0.49
USP44-203ENST00000537435 OPN1MWP04001 364 aa11.97□□□□□ -0.49
USP44-203ENST00000537435 OPN1MW2P0DN77 364 aa11.97□□□□□ -0.49
USP44-203ENST00000537435 OPN1MW3P0DN78 364 aa11.97□□□□□ -0.49
USP44-203ENST00000537435 FABP6P51161 128 aa11.97□□□□□ -0.49
USP44-203ENST00000537435 GUSBP1Q15486 140 aa11.97□□□□□ -0.49
USP44-203ENST00000537435 FFAR4Q5NUL3 377 aa11.97□□□□□ -0.49
USP44-203ENST00000537435 NCR3LG1Q68D85 454 aa11.97□□□□□ -0.49
USP44-203ENST00000537435 RPUSD4Q96CM3 377 aaKnown RBP11.97□□□□□ -0.49
USP44-203ENST00000537435 TAAR6Q96RI8 345 aa11.97□□□□□ -0.49
USP44-203ENST00000537435 MRPL37Q9BZE1 423 aaKnown RBP11.97□□□□□ -0.49
USP44-203ENST00000537435 CTDSP1Q9GZU7 261 aa11.97□□□□□ -0.49
USP44-203ENST00000537435 PPP1R2P9O14990 202 aa11.96□□□□□ -0.49
USP44-203ENST00000537435 SOD3P08294 240 aa11.96□□□□□ -0.49
USP44-203ENST00000537435 KIR2DL2P43627 348 aaPredicted RBP11.96□□□□□ -0.49
USP44-203ENST00000537435 PSMB3P49720 205 aa11.96□□□□□ -0.49
USP44-203ENST00000537435 Q3ZCU0 254 aa11.96□□□□□ -0.49
USP44-203ENST00000537435 C4orf17Q53FE4 359 aa11.96□□□□□ -0.49
USP44-203ENST00000537435 PDZD11Q5EBL8 140 aa11.96□□□□□ -0.49
USP44-203ENST00000537435 CYP2G1PQ6ZSU1 146 aa11.96□□□□□ -0.49
USP44-203ENST00000537435 AGMATQ9BSE5 352 aa11.96□□□□□ -0.49
USP44-203ENST00000537435 PSG11Q9UQ72 335 aa11.96□□□□□ -0.49
USP44-203ENST00000537435 CACNA1DQ01668 2161 aa11.96□□□□□ -0.5
USP44-203ENST00000537435 USF3Q68DE3 2245 aa11.96□□□□□ -0.5
USP44-203ENST00000537435 TRBV24-1A0A075B6N3 115 aa11.96□□□□□ -0.5
USP44-203ENST00000537435 KBTBD11O94819 623 aa11.96□□□□□ -0.5
USP44-203ENST00000537435 MBP02144 154 aa11.96□□□□□ -0.5
USP44-203ENST00000537435 CECR9P0C854 216 aa11.96□□□□□ -0.5
USP44-203ENST00000537435 TMEM241Q24JQ0 296 aa11.96□□□□□ -0.5
USP44-203ENST00000537435 HIST3H2BBQ8N257 126 aa11.96□□□□□ -0.5
USP44-203ENST00000537435 OR10D4PQ8NGN7 298 aa11.96□□□□□ -0.5
USP44-203ENST00000537435 CIB3Q96Q77 187 aaPredicted RBP11.96□□□□□ -0.5
USP44-203ENST00000537435 NPCDR1Q9BY65 106 aa11.96□□□□□ -0.5
USP44-203ENST00000537435 GPR61Q9BZJ8 451 aa11.96□□□□□ -0.5
USP44-203ENST00000537435 TGOLN2O43493 480 aa11.95□□□□□ -0.5
USP44-203ENST00000537435 COX5AP20674 150 aa11.95□□□□□ -0.5
USP44-203ENST00000537435 MDKP21741 143 aaPredicted RBP11.95□□□□□ -0.5
USP44-203ENST00000537435 CCL11P51671 97 aa11.95□□□□□ -0.5
USP44-203ENST00000537435 LTC4SQ16873 150 aa11.95□□□□□ -0.5
USP44-203ENST00000537435 ZNF66Q6ZN08 573 aa11.95□□□□□ -0.5
USP44-203ENST00000537435 TCTEX1D1Q8N7M0 179 aa11.95□□□□□ -0.5
USP44-203ENST00000537435 C9orf106Q8NAJ2 232 aa11.95□□□□□ -0.5
USP44-203ENST00000537435 GATAD1Q8WUU5 269 aa11.95□□□□□ -0.5
USP44-203ENST00000537435 LURAP1Q96LR2 239 aa11.95□□□□□ -0.5
USP44-203ENST00000537435 DCTN5Q9BTE1 182 aa11.95□□□□□ -0.5
USP44-203ENST00000537435 ACTR3CQ9C0K3 210 aaPredicted RBP11.95□□□□□ -0.5
USP44-203ENST00000537435 LAMP3Q9UQV4 416 aa11.95□□□□□ -0.5
USP44-203ENST00000537435 ZNF891A8MT65 544 aaPredicted RBP11.95□□□□□ -0.5
USP44-203ENST00000537435 IFNL4K9M1U5 179 aa11.95□□□□□ -0.5
USP44-203ENST00000537435 NKX2-8O15522 239 aa11.95□□□□□ -0.5
USP44-203ENST00000537435 KITLGP21583 273 aa11.95□□□□□ -0.5
USP44-203ENST00000537435 SRSF6Q13247 344 aaKnown RBP11.95□□□□□ -0.5
USP44-203ENST00000537435 SMIM21Q3B7S5 101 aa11.95□□□□□ -0.5
USP44-203ENST00000537435 CDPF1Q6NVV7 123 aa11.95□□□□□ -0.5
USP44-203ENST00000537435 C16orf82Q7Z2V1 217 aa11.95□□□□□ -0.5
USP44-203ENST00000537435 ELOA3CA0A087WX78 387 aaPredicted RBP11.94□□□□□ -0.5
USP44-203ENST00000537435 TRBV23-1A0A0A0MS06 115 aa11.94□□□□□ -0.5
USP44-203ENST00000537435 MARCH11A6NNE9 402 aa11.94□□□□□ -0.5
USP44-203ENST00000537435 TMEM250H0YL14 139 aa11.94□□□□□ -0.5
USP44-203ENST00000537435 PHOX2AO14813 284 aa11.94□□□□□ -0.5
USP44-203ENST00000537435 RPL23P62829 140 aaKnown RBP11.94□□□□□ -0.5
USP44-203ENST00000537435 EDDM3AQ14507 147 aa11.94□□□□□ -0.5
USP44-203ENST00000537435 ZNF709Q8N972 641 aa11.94□□□□□ -0.5
USP44-203ENST00000537435 FDCSPQ8NFU4 85 aa11.94□□□□□ -0.5
USP44-203ENST00000537435 RAB24Q969Q5 203 aa11.94□□□□□ -0.5
USP44-203ENST00000537435 HSD17B10Q99714 261 aaKnown RBP11.94□□□□□ -0.5
USP44-203ENST00000537435 PARLQ9H300 379 aa11.94□□□□□ -0.5
USP44-203ENST00000537435 RD3LP0DJH9 198 aa11.94□□□□□ -0.5
USP44-203ENST00000537435 GCH1P30793 250 aa11.94□□□□□ -0.5
USP44-203ENST00000537435 VWC2Q2TAL6 325 aa11.94□□□□□ -0.5
USP44-203ENST00000537435 BSXQ3C1V8 233 aa11.94□□□□□ -0.5
USP44-203ENST00000537435 ZNF718Q3SXZ3 478 aa11.94□□□□□ -0.5
USP44-203ENST00000537435 FAM209BQ5JX69 171 aa11.94□□□□□ -0.5
USP44-203ENST00000537435 CD177Q8N6Q3 437 aa11.94□□□□□ -0.5
USP44-203ENST00000537435 OR4F5Q8NH21 305 aa11.94□□□□□ -0.5
USP44-203ENST00000537435 OR4F4Q96R69 305 aa11.94□□□□□ -0.5
USP44-203ENST00000537435 QTRT1Q9BXR0 403 aaKnown RBP11.94□□□□□ -0.5
USP44-203ENST00000537435 DMRT1Q9Y5R6 373 aa11.94□□□□□ -0.5
USP44-203ENST00000537435 C15orf65H3BRN8 121 aa11.93□□□□□ -0.5
USP44-203ENST00000537435 SPINT2O43291 252 aa11.93□□□□□ -0.5
USP44-203ENST00000537435 DEFA4P12838 97 aa11.93□□□□□ -0.5
USP44-203ENST00000537435 FOXF2Q12947 444 aa11.93□□□□□ -0.5
USP44-203ENST00000537435 NECAP1Q8NC96 275 aa11.93□□□□□ -0.5
USP44-203ENST00000537435 C1orf162Q8NEQ5 155 aaPredicted RBP11.93□□□□□ -0.5
USP44-203ENST00000537435 LRRC29Q8WV35 223 aa11.93□□□□□ -0.5
USP44-203ENST00000537435 PLPPR2Q96GM1 343 aa11.93□□□□□ -0.5
USP44-203ENST00000537435 MANBALQ9NQG1 85 aa11.93□□□□□ -0.5
USP44-203ENST00000537435 WASF3Q9UPY6 502 aa11.93□□□□□ -0.5
USP44-203ENST00000537435 PRR14LQ5THK1 2151 aa11.93□□□□□ -0.5
USP44-203ENST00000537435 PFN1P07737 140 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms