RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 PTTG3PQ9NZH4 202 aa4.59□□□□□ -1.67
CCDC60-203ENST00000536742 ZNF391Q9UJN7 358 aa4.59□□□□□ -1.67
CCDC60-203ENST00000536742 POLR1DQ9Y2S0 133 aa4.59□□□□□ -1.67
CCDC60-203ENST00000536742 EXOSC1Q9Y3B2 195 aaKnown RBP4.59□□□□□ -1.67
CCDC60-203ENST00000536742 LOC102724200A0A096LPH7 203 aaPredicted RBP4.58□□□□□ -1.68
CCDC60-203ENST00000536742 IGHV3-38A0A0C4DH36 116 aa4.58□□□□□ -1.68
CCDC60-203ENST00000536742 DAPL1A0PJW8 107 aa4.58□□□□□ -1.68
CCDC60-203ENST00000536742 ZNF670-ZNF695F2Z2N8 137 aa4.58□□□□□ -1.68
CCDC60-203ENST00000536742 MYL12BO14950 172 aa4.58□□□□□ -1.68
CCDC60-203ENST00000536742 SIGLEC5O15389 551 aa4.58□□□□□ -1.68
CCDC60-203ENST00000536742 ENTPD6O75354 484 aa4.58□□□□□ -1.68
CCDC60-203ENST00000536742 IFNA21P01568 189 aa4.58□□□□□ -1.68
CCDC60-203ENST00000536742 IFNA17P01571 189 aa4.58□□□□□ -1.68
CCDC60-203ENST00000536742 APOC1P02654 83 aa4.58□□□□□ -1.68
CCDC60-203ENST00000536742 CST2P09228 141 aa4.58□□□□□ -1.68
CCDC60-203ENST00000536742 GNAO1P09471 354 aa4.58□□□□□ -1.68
CCDC60-203ENST00000536742 PIPP12273 146 aaPredicted RBP4.58□□□□□ -1.68
CCDC60-203ENST00000536742 SPI1P17947 270 aa4.58□□□□□ -1.68
CCDC60-203ENST00000536742 HTR1DP28221 377 aa4.58□□□□□ -1.68
CCDC60-203ENST00000536742 LAP3P28838 519 aa4.58□□□□□ -1.68
CCDC60-203ENST00000536742 FCGR2BP31994 310 aaPredicted RBP4.58□□□□□ -1.68
CCDC60-203ENST00000536742 FCGR2CP31995 323 aa4.58□□□□□ -1.68
CCDC60-203ENST00000536742 NAA10P41227 235 aaPredicted RBP4.58□□□□□ -1.68
CCDC60-203ENST00000536742 ST3GAL4Q11206 333 aa4.58□□□□□ -1.68
CCDC60-203ENST00000536742 MRPL28Q13084 256 aaKnown RBP4.58□□□□□ -1.68
CCDC60-203ENST00000536742 CRMP1Q14194 572 aa4.58□□□□□ -1.68
CCDC60-203ENST00000536742 DGUOKQ16854 277 aa4.58□□□□□ -1.68
CCDC60-203ENST00000536742 C10orf128Q5T292 105 aa4.58□□□□□ -1.68
CCDC60-203ENST00000536742 PLEKHG7Q6ZR37 379 aa4.58□□□□□ -1.68
CCDC60-203ENST00000536742 PRSS48Q7RTY5 328 aa4.58□□□□□ -1.68
CCDC60-203ENST00000536742 FAM122BQ7Z309 247 aa4.58□□□□□ -1.68
CCDC60-203ENST00000536742 FAM220AQ7Z4H9 259 aa4.58□□□□□ -1.68
CCDC60-203ENST00000536742 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.58□□□□□ -1.68
CCDC60-203ENST00000536742 ACBD7Q8N6N7 88 aa4.58□□□□□ -1.68
CCDC60-203ENST00000536742 C5orf56Q8N8D9 126 aa4.58□□□□□ -1.68
CCDC60-203ENST00000536742 LRRC75AQ8NAA5 344 aa4.58□□□□□ -1.68
CCDC60-203ENST00000536742 CYB561A3Q8NBI2 242 aa4.58□□□□□ -1.68
CCDC60-203ENST00000536742 NOXO1Q8NFA2 376 aa4.58□□□□□ -1.68
CCDC60-203ENST00000536742 OR8D4Q8NGM9 314 aa4.58□□□□□ -1.68
CCDC60-203ENST00000536742 OR2T27Q8NH04 317 aa4.58□□□□□ -1.68
CCDC60-203ENST00000536742 CNIH3Q8TBE1 160 aa4.58□□□□□ -1.68
CCDC60-203ENST00000536742 ASB17Q8WXJ9 295 aa4.58□□□□□ -1.68
CCDC60-203ENST00000536742 TEAD3Q99594 435 aa4.58□□□□□ -1.68
CCDC60-203ENST00000536742 MRPS26Q9BYN8 205 aaKnown RBP4.58□□□□□ -1.68
CCDC60-203ENST00000536742 YIPF3Q9GZM5 350 aa4.58□□□□□ -1.68
CCDC60-203ENST00000536742 SYT4Q9H2B2 425 aa4.58□□□□□ -1.68
CCDC60-203ENST00000536742 SP140LQ9H930 580 aa4.58□□□□□ -1.68
CCDC60-203ENST00000536742 FAM212BQ9NTI7 297 aaPredicted RBP4.58□□□□□ -1.68
CCDC60-203ENST00000536742 DNAJC27Q9NZQ0 273 aa4.58□□□□□ -1.68
CCDC60-203ENST00000536742 LAMP5Q9UJQ1 280 aa4.58□□□□□ -1.68
CCDC60-203ENST00000536742 HHLA2Q9UM44 414 aa4.58□□□□□ -1.68
CCDC60-203ENST00000536742 B9D1Q9UPM9 204 aa4.58□□□□□ -1.68
CCDC60-203ENST00000536742 PIGLQ9Y2B2 252 aa4.58□□□□□ -1.68
CCDC60-203ENST00000536742 C12orf71A8MTZ7 269 aa4.57□□□□□ -1.68
CCDC60-203ENST00000536742 C17orf98A8MV24 154 aa4.57□□□□□ -1.68
CCDC60-203ENST00000536742 NOL3O60936 208 aaKnown RBP4.57□□□□□ -1.68
CCDC60-203ENST00000536742 RBP4P02753 201 aa4.57□□□□□ -1.68
CCDC60-203ENST00000536742 KRT8P05787 483 aa4.57□□□□□ -1.68
CCDC60-203ENST00000536742 LYNP07948 512 aa4.57□□□□□ -1.68
CCDC60-203ENST00000536742 DBTP11182 482 aaKnown RBP4.57□□□□□ -1.68
CCDC60-203ENST00000536742 MSR1P21757 451 aa4.57□□□□□ -1.68
CCDC60-203ENST00000536742 VDAC1P21796 283 aa4.57□□□□□ -1.68
CCDC60-203ENST00000536742 CRHBPP24387 322 aa4.57□□□□□ -1.68
CCDC60-203ENST00000536742 ACKR3P25106 362 aa4.57□□□□□ -1.68
CCDC60-203ENST00000536742 NPBWR2P48146 333 aa4.57□□□□□ -1.68
CCDC60-203ENST00000536742 ZNF133P52736 654 aaPredicted RBP4.57□□□□□ -1.68
CCDC60-203ENST00000536742 FXYD6P3P58550 94 aa4.57□□□□□ -1.68
CCDC60-203ENST00000536742 TAS2R43P59537 309 aa4.57□□□□□ -1.68
CCDC60-203ENST00000536742 LSM6P62312 80 aaKnown RBP4.57□□□□□ -1.68
CCDC60-203ENST00000536742 ACTA2P62736 377 aa4.57□□□□□ -1.68
CCDC60-203ENST00000536742 RPL31P62899 125 aaKnown RBP4.57□□□□□ -1.68
CCDC60-203ENST00000536742 ACTG2P63267 376 aa4.57□□□□□ -1.68
CCDC60-203ENST00000536742 AADACL4Q5VUY2 407 aa4.57□□□□□ -1.68
CCDC60-203ENST00000536742 ZNF773Q6PK81 442 aa4.57□□□□□ -1.68
CCDC60-203ENST00000536742 AHSA2Q719I0 299 aa4.57□□□□□ -1.68
CCDC60-203ENST00000536742 ERI1Q8IV48 349 aaKnown RBP4.57□□□□□ -1.68
CCDC60-203ENST00000536742 OR10H4Q8NGA5 316 aa4.57□□□□□ -1.68
CCDC60-203ENST00000536742 LRRC29Q8WV35 223 aa4.57□□□□□ -1.68
CCDC60-203ENST00000536742 APOBEC3DQ96AK3 386 aaPredicted RBP4.57□□□□□ -1.68
CCDC60-203ENST00000536742 FLYWCH2Q96CP2 140 aaKnown RBP4.57□□□□□ -1.68
CCDC60-203ENST00000536742 GAFA1Q96PS6 74 aa4.57□□□□□ -1.68
CCDC60-203ENST00000536742 OR5B12Q96R08 314 aa4.57□□□□□ -1.68
CCDC60-203ENST00000536742 RNF126Q9BV68 326 aa4.57□□□□□ -1.68
CCDC60-203ENST00000536742 MND1Q9BWT6 205 aa4.57□□□□□ -1.68
CCDC60-203ENST00000536742 MROQ9BYG7 248 aa4.57□□□□□ -1.68
CCDC60-203ENST00000536742 NMNAT2Q9BZQ4 307 aa4.57□□□□□ -1.68
CCDC60-203ENST00000536742 ALX4Q9H161 411 aaPredicted RBP4.57□□□□□ -1.68
CCDC60-203ENST00000536742 NIPAL2Q9H841 368 aa4.57□□□□□ -1.68
CCDC60-203ENST00000536742 WDR76Q9H967 626 aa4.57□□□□□ -1.68
CCDC60-203ENST00000536742 AMBNQ9NP70 447 aa4.57□□□□□ -1.68
CCDC60-203ENST00000536742 RAB9BQ9NP90 201 aa4.57□□□□□ -1.68
CCDC60-203ENST00000536742 C19orf12Q9NSK7 152 aa4.57□□□□□ -1.68
CCDC60-203ENST00000536742 NDUFA13Q9P0J0 144 aa4.57□□□□□ -1.68
CCDC60-203ENST00000536742 PSORS1C1Q9UIG5 152 aa4.57□□□□□ -1.68
CCDC60-203ENST00000536742 DIMT1Q9UNQ2 313 aaKnown RBP4.57□□□□□ -1.68
CCDC60-203ENST00000536742 IGLV4-3A0A075B6K6 122 aa4.56□□□□□ -1.68
CCDC60-203ENST00000536742 FAM183AA6NL82 134 aa4.56□□□□□ -1.68
CCDC60-203ENST00000536742 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.56□□□□□ -1.68
CCDC60-203ENST00000536742 ZNF593O00488 134 aaPredicted RBP4.56□□□□□ -1.68
CCDC60-203ENST00000536742 ZNF254O75437 659 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms