RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 MEOX2P50222 304 aa11.13□□□□□ -0.63
VPS33B-202ENST00000535906 ARL16Q0P5N6 197 aa11.13□□□□□ -0.63
VPS33B-202ENST00000535906 KHDC3LQ587J8 217 aa11.13□□□□□ -0.63
VPS33B-202ENST00000535906 FAM90A1Q86YD7 464 aa11.13□□□□□ -0.63
VPS33B-202ENST00000535906 SCGB1C1Q8TD33 95 aa11.13□□□□□ -0.63
VPS33B-202ENST00000535906 PLPPR2Q96GM1 343 aa11.13□□□□□ -0.63
VPS33B-202ENST00000535906 PSG11Q9UQ72 335 aa11.13□□□□□ -0.63
VPS33B-202ENST00000535906 DSCAMO60469 2012 aa11.13□□□□□ -0.63
VPS33B-202ENST00000535906 PCNX1Q96RV3 2341 aa11.13□□□□□ -0.63
VPS33B-202ENST00000535906 ODAMA1E959 279 aa11.13□□□□□ -0.63
VPS33B-202ENST00000535906 LINC00473A8K010 186 aa11.13□□□□□ -0.63
VPS33B-202ENST00000535906 UBE2CO00762 179 aa11.13□□□□□ -0.63
VPS33B-202ENST00000535906 S1PR2O95136 353 aa11.13□□□□□ -0.63
VPS33B-202ENST00000535906 OR2C1O95371 312 aa11.13□□□□□ -0.63
VPS33B-202ENST00000535906 OR8U8P0C7N1 319 aa11.13□□□□□ -0.63
VPS33B-202ENST00000535906 METTL15P1P0C7V9 234 aa11.13□□□□□ -0.63
VPS33B-202ENST00000535906 CD40P25942 277 aa11.13□□□□□ -0.63
VPS33B-202ENST00000535906 HBG1P69891 147 aa11.13□□□□□ -0.63
VPS33B-202ENST00000535906 HBG2P69892 147 aa11.13□□□□□ -0.63
VPS33B-202ENST00000535906 HTD2P86397 168 aa11.13□□□□□ -0.63
VPS33B-202ENST00000535906 SPACA3Q8IXA5 215 aa11.13□□□□□ -0.63
VPS33B-202ENST00000535906 ZNF525Q8N782 197 aa11.13□□□□□ -0.63
VPS33B-202ENST00000535906 CYB561D1Q8N8Q1 229 aa11.13□□□□□ -0.63
VPS33B-202ENST00000535906 TCTEX1D2Q8WW35 142 aa11.13□□□□□ -0.63
VPS33B-202ENST00000535906 SNX22Q96L94 193 aa11.13□□□□□ -0.63
VPS33B-202ENST00000535906 YPEL4Q96NS1 127 aa11.13□□□□□ -0.63
VPS33B-202ENST00000535906 PSMG3Q9BT73 122 aaPredicted RBP11.13□□□□□ -0.63
VPS33B-202ENST00000535906 RSG1Q9BU20 258 aa11.13□□□□□ -0.63
VPS33B-202ENST00000535906 FAM90A26D6RGX4 464 aa11.12□□□□□ -0.63
VPS33B-202ENST00000535906 PRRG2O14669 202 aa11.12□□□□□ -0.63
VPS33B-202ENST00000535906 MGST3O14880 152 aa11.12□□□□□ -0.63
VPS33B-202ENST00000535906 EIF3GO75821 320 aaKnown RBP eCLIP11.12□□□□□ -0.63
VPS33B-202ENST00000535906 CLDN1O95832 211 aa11.12□□□□□ -0.63
VPS33B-202ENST00000535906 P0C879 139 aa11.12□□□□□ -0.63
VPS33B-202ENST00000535906 CATR1Q13166 79 aa11.12□□□□□ -0.63
VPS33B-202ENST00000535906 HAPLN4Q86UW8 402 aa11.12□□□□□ -0.63
VPS33B-202ENST00000535906 ZNF429Q86V71 674 aa11.12□□□□□ -0.63
VPS33B-202ENST00000535906 RAB39BQ96DA2 213 aa11.12□□□□□ -0.63
VPS33B-202ENST00000535906 RPRMQ9NS64 109 aa11.12□□□□□ -0.63
VPS33B-202ENST00000535906 ADH4P08319 380 aa11.11□□□□□ -0.63
VPS33B-202ENST00000535906 GZMHP20718 246 aa11.11□□□□□ -0.63
VPS33B-202ENST00000535906 CEBPGP53567 150 aa11.11□□□□□ -0.63
VPS33B-202ENST00000535906 UBE2KP61086 200 aa11.11□□□□□ -0.63
VPS33B-202ENST00000535906 Q3ZCU0 254 aa11.11□□□□□ -0.63
VPS33B-202ENST00000535906 TRAT1Q6PIZ9 186 aa11.11□□□□□ -0.63
VPS33B-202ENST00000535906 OR10G4Q8NGN3 311 aa11.11□□□□□ -0.63
VPS33B-202ENST00000535906 SCNM1Q9BWG6 230 aa11.11□□□□□ -0.63
VPS33B-202ENST00000535906 SH3BGRL2Q9UJC5 107 aa11.11□□□□□ -0.63
VPS33B-202ENST00000535906 A0A087WWC5 75 aa11.11□□□□□ -0.63
VPS33B-202ENST00000535906 LOC102723971A0A1B0GUV8 181 aa11.11□□□□□ -0.63
VPS33B-202ENST00000535906 PPIHO43447 177 aaKnown RBP11.11□□□□□ -0.63
VPS33B-202ENST00000535906 PROP1O75360 226 aa11.11□□□□□ -0.63
VPS33B-202ENST00000535906 FBP1P09467 338 aa11.11□□□□□ -0.63
VPS33B-202ENST00000535906 SELLP14151 372 aa11.11□□□□□ -0.63
VPS33B-202ENST00000535906 TNFRSF9Q07011 255 aa11.11□□□□□ -0.63
VPS33B-202ENST00000535906 MSMO1Q15800 293 aa11.11□□□□□ -0.63
VPS33B-202ENST00000535906 LRRC75BQ2VPJ9 315 aa11.11□□□□□ -0.63
VPS33B-202ENST00000535906 SPANXN5Q5MJ07 72 aa11.11□□□□□ -0.63
VPS33B-202ENST00000535906 ADAM5Q6NVV9 412 aa11.11□□□□□ -0.63
VPS33B-202ENST00000535906 MRGPRGQ86SM5 289 aa11.11□□□□□ -0.63
VPS33B-202ENST00000535906 PARD6GQ9BYG4 376 aaPredicted RBP11.11□□□□□ -0.63
VPS33B-202ENST00000535906 SEBOXQ9HB31 216 aaPredicted RBP11.11□□□□□ -0.63
VPS33B-202ENST00000535906 GCM1Q9NP62 436 aa11.11□□□□□ -0.63
VPS33B-202ENST00000535906 KALRNO60229 2985 aa11.11□□□□□ -0.63
VPS33B-202ENST00000535906 A0A1W2PPE3 182 aa11.1□□□□□ -0.63
VPS33B-202ENST00000535906 IGHV1-46P01743 117 aa11.1□□□□□ -0.63
VPS33B-202ENST00000535906 TAGLN2P37802 199 aaKnown RBP11.1□□□□□ -0.63
VPS33B-202ENST00000535906 GATA4P43694 442 aa11.1□□□□□ -0.63
VPS33B-202ENST00000535906 EDDM3BP56851 147 aa11.1□□□□□ -0.63
VPS33B-202ENST00000535906 SERF2P84101 59 aa11.1□□□□□ -0.63
VPS33B-202ENST00000535906 CR1LQ2VPA4 569 aa11.1□□□□□ -0.63
VPS33B-202ENST00000535906 MORN2Q502X0 79 aa11.1□□□□□ -0.63
VPS33B-202ENST00000535906 HEPN1Q6WQI6 88 aa11.1□□□□□ -0.63
VPS33B-202ENST00000535906 C1QL4Q86Z23 238 aa11.1□□□□□ -0.63
VPS33B-202ENST00000535906 LILRB2Q8N423 598 aa11.1□□□□□ -0.63
VPS33B-202ENST00000535906 MBD3L1Q8WWY6 194 aa11.1□□□□□ -0.63
VPS33B-202ENST00000535906 TVP23CQ96ET8 276 aa11.1□□□□□ -0.63
VPS33B-202ENST00000535906 NIPSNAP3BQ9BS92 247 aa11.1□□□□□ -0.63
VPS33B-202ENST00000535906 RBKSQ9H477 322 aa11.1□□□□□ -0.63
VPS33B-202ENST00000535906 DOCK11Q5JSL3 2073 aa11.1□□□□□ -0.63
VPS33B-202ENST00000535906 IGHV3-7P01780 117 aa11.1□□□□□ -0.63
VPS33B-202ENST00000535906 SELENOVP59797 346 aa11.1□□□□□ -0.63
VPS33B-202ENST00000535906 DLK1P80370 383 aa11.1□□□□□ -0.63
VPS33B-202ENST00000535906 TNFAIP6P98066 277 aaPredicted RBP11.1□□□□□ -0.63
VPS33B-202ENST00000535906 TBR1Q16650 682 aa11.1□□□□□ -0.63
VPS33B-202ENST00000535906 DUX4L9Q6RFH8 374 aaPredicted RBP11.1□□□□□ -0.63
VPS33B-202ENST00000535906 PPP1R35Q8TAP8 253 aa11.1□□□□□ -0.63
VPS33B-202ENST00000535906 GNG12Q9UBI6 72 aa11.1□□□□□ -0.63
VPS33B-202ENST00000535906 METTL1Q9UBP6 276 aaKnown RBP11.1□□□□□ -0.63
VPS33B-202ENST00000535906 HSPB7Q9UBY9 170 aa11.1□□□□□ -0.63
VPS33B-202ENST00000535906 LRRC30A6NM36 301 aa11.09□□□□□ -0.63
VPS33B-202ENST00000535906 IGHV2-5P01817 119 aa11.09□□□□□ -0.63
VPS33B-202ENST00000535906 S100A8P05109 93 aa11.09□□□□□ -0.63
VPS33B-202ENST00000535906 ZNF134P52741 427 aa11.09□□□□□ -0.63
VPS33B-202ENST00000535906 LOXL3P58215 753 aa11.09□□□□□ -0.63
VPS33B-202ENST00000535906 GFRALQ6UXV0 394 aa11.09□□□□□ -0.63
VPS33B-202ENST00000535906 ZNF66Q6ZN08 573 aa11.09□□□□□ -0.63
VPS33B-202ENST00000535906 SLC35E3Q7Z769 313 aa11.09□□□□□ -0.63
VPS33B-202ENST00000535906 TGIF2LYQ8IUE0 185 aa11.09□□□□□ -0.63
VPS33B-202ENST00000535906 HSD17B10Q99714 261 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms