RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 NXPH1P58417 271 aa4.38□□□□□ -1.71
SNHG1-201ENST00000535076 UFM1P61960 85 aa4.38□□□□□ -1.71
SNHG1-201ENST00000535076 MRPS6P82932 125 aaKnown RBP4.38□□□□□ -1.71
SNHG1-201ENST00000535076 KLRB1Q12918 225 aa4.38□□□□□ -1.71
SNHG1-201ENST00000535076 CATR1Q13166 79 aa4.38□□□□□ -1.71
SNHG1-201ENST00000535076 ICAM4Q14773 271 aa4.38□□□□□ -1.71
SNHG1-201ENST00000535076 CDSNQ15517 529 aa4.38□□□□□ -1.71
SNHG1-201ENST00000535076 IGFBP7Q16270 282 aa4.38□□□□□ -1.71
SNHG1-201ENST00000535076 CCL15Q16663 113 aa4.38□□□□□ -1.71
SNHG1-201ENST00000535076 ZNF260Q3ZCT1 412 aa4.38□□□□□ -1.71
SNHG1-201ENST00000535076 MPV17L2Q567V2 206 aa4.38□□□□□ -1.71
SNHG1-201ENST00000535076 TMEM200BQ69YZ2 307 aa4.38□□□□□ -1.71
SNHG1-201ENST00000535076 ZNF322Q6U7Q0 402 aaPredicted RBP4.38□□□□□ -1.71
SNHG1-201ENST00000535076 SHISA6Q6ZSJ9 500 aa4.38□□□□□ -1.71
SNHG1-201ENST00000535076 LINC00336Q6ZUF6 198 aa4.38□□□□□ -1.71
SNHG1-201ENST00000535076 ZNF433Q8N7K0 673 aaPredicted RBP4.38□□□□□ -1.71
SNHG1-201ENST00000535076 ZNF615Q8N8J6 731 aa4.38□□□□□ -1.71
SNHG1-201ENST00000535076 APCDD1LQ8NCL9 501 aa4.38□□□□□ -1.71
SNHG1-201ENST00000535076 OR10G7Q8NGN6 311 aa4.38□□□□□ -1.71
SNHG1-201ENST00000535076 OR1L1Q8NH94 360 aa4.38□□□□□ -1.71
SNHG1-201ENST00000535076 FNDC9Q8TBE3 224 aa4.38□□□□□ -1.71
SNHG1-201ENST00000535076 WIPF2Q8TF74 440 aaPredicted RBP4.38□□□□□ -1.71
SNHG1-201ENST00000535076 SLC25A43Q8WUT9 341 aaPredicted RBP4.38□□□□□ -1.71
SNHG1-201ENST00000535076 TMEM37Q8WXS4 190 aa4.38□□□□□ -1.71
SNHG1-201ENST00000535076 NUS1Q96E22 293 aa4.38□□□□□ -1.71
SNHG1-201ENST00000535076 WDYHV1Q96HA8 205 aa4.38□□□□□ -1.71
SNHG1-201ENST00000535076 C8orf49Q96NF6 230 aa4.38□□□□□ -1.71
SNHG1-201ENST00000535076 PRADC1Q9BSG0 188 aa4.38□□□□□ -1.71
SNHG1-201ENST00000535076 TM2D1Q9BX74 207 aa4.38□□□□□ -1.71
SNHG1-201ENST00000535076 OR2H1Q9GZK4 316 aa4.38□□□□□ -1.71
SNHG1-201ENST00000535076 FAM234AQ9H0X4 552 aa4.38□□□□□ -1.71
SNHG1-201ENST00000535076 CMC2Q9NRP2 79 aa4.38□□□□□ -1.71
SNHG1-201ENST00000535076 RLIMQ9NVW2 624 aa4.38□□□□□ -1.71
SNHG1-201ENST00000535076 ST6GALNAC2Q9UJ37 374 aa4.38□□□□□ -1.71
SNHG1-201ENST00000535076 PRNDQ9UKY0 176 aa4.38□□□□□ -1.71
SNHG1-201ENST00000535076 ZNF257Q9Y2Q1 563 aa4.38□□□□□ -1.71
SNHG1-201ENST00000535076 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.38□□□□□ -1.71
SNHG1-201ENST00000535076 LSM5Q9Y4Y9 91 aaKnown RBP4.38□□□□□ -1.71
SNHG1-201ENST00000535076 NRXN3Q9Y4C0 1643 aa4.38□□□□□ -1.71
SNHG1-201ENST00000535076 ADAMTS7Q9UKP4 1686 aa4.38□□□□□ -1.71
SNHG1-201ENST00000535076 RICTORQ6R327 1708 aa4.38□□□□□ -1.71
SNHG1-201ENST00000535076 ALPK3Q96L96 1907 aa4.37□□□□□ -1.71
SNHG1-201ENST00000535076 TRGV10A0A0A0MS01 117 aa4.37□□□□□ -1.71
SNHG1-201ENST00000535076 A0A0A6YYD5 115 aa4.37□□□□□ -1.71
SNHG1-201ENST00000535076 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.37□□□□□ -1.71
SNHG1-201ENST00000535076 TRBV9A0A0B4J1U6 114 aa4.37□□□□□ -1.71
SNHG1-201ENST00000535076 TMEM89A2RUT3 159 aa4.37□□□□□ -1.71
SNHG1-201ENST00000535076 C5orf49A4QMS7 147 aa4.37□□□□□ -1.71
SNHG1-201ENST00000535076 MANSC4A6NHS7 340 aaPredicted RBP4.37□□□□□ -1.71
SNHG1-201ENST00000535076 C2CD4BA6NLJ0 364 aa4.37□□□□□ -1.71
SNHG1-201ENST00000535076 ZNF785A8K8V0 405 aa4.37□□□□□ -1.71
SNHG1-201ENST00000535076 K7N7A8 449 aa4.37□□□□□ -1.71
SNHG1-201ENST00000535076 CLDN5O00501 218 aa4.37□□□□□ -1.71
SNHG1-201ENST00000535076 COX7A2P14406 83 aa4.37□□□□□ -1.71
SNHG1-201ENST00000535076 ZNF20P17024 532 aa4.37□□□□□ -1.71
SNHG1-201ENST00000535076 RPL7P18124 248 aaKnown RBP4.37□□□□□ -1.71
SNHG1-201ENST00000535076 PRDX3P30048 256 aaKnown RBP4.37□□□□□ -1.71
SNHG1-201ENST00000535076 CCR2P41597 374 aa4.37□□□□□ -1.71
SNHG1-201ENST00000535076 NSG1P42857 185 aa4.37□□□□□ -1.71
SNHG1-201ENST00000535076 IER3P46695 156 aa4.37□□□□□ -1.71
SNHG1-201ENST00000535076 SGSHP51688 502 aa4.37□□□□□ -1.71
SNHG1-201ENST00000535076 XGP55808 180 aa4.37□□□□□ -1.71
SNHG1-201ENST00000535076 RND3P61587 244 aa4.37□□□□□ -1.71
SNHG1-201ENST00000535076 TIAL1Q01085 375 aaKnown RBP eCLIP4.37□□□□□ -1.71
SNHG1-201ENST00000535076 CXCL9Q07325 125 aa4.37□□□□□ -1.71
SNHG1-201ENST00000535076 IL15RAQ13261 267 aa4.37□□□□□ -1.71
SNHG1-201ENST00000535076 SLC25A35Q3KQZ1 300 aa4.37□□□□□ -1.71
SNHG1-201ENST00000535076 OR10J3Q5JRS4 329 aa4.37□□□□□ -1.71
SNHG1-201ENST00000535076 DCAF12Q5T6F0 453 aa4.37□□□□□ -1.71
SNHG1-201ENST00000535076 TSPO2Q5TGU0 170 aa4.37□□□□□ -1.71
SNHG1-201ENST00000535076 SLC25A34Q6PIV7 304 aa4.37□□□□□ -1.71
SNHG1-201ENST00000535076 CEACAM20Q6UY09 585 aa4.37□□□□□ -1.71
SNHG1-201ENST00000535076 PPP1R32Q7Z5V6 425 aa4.37□□□□□ -1.71
SNHG1-201ENST00000535076 BAALCQ8WXS3 180 aa4.37□□□□□ -1.71
SNHG1-201ENST00000535076 OR5P2Q8WZ92 322 aa4.37□□□□□ -1.71
SNHG1-201ENST00000535076 C10orf35Q96D05 121 aa4.37□□□□□ -1.71
SNHG1-201ENST00000535076 WWC2-AS2Q96NR7 200 aa4.37□□□□□ -1.71
SNHG1-201ENST00000535076 VGLL1Q99990 258 aa4.37□□□□□ -1.71
SNHG1-201ENST00000535076 C16orf70Q9BSU1 422 aa4.37□□□□□ -1.71
SNHG1-201ENST00000535076 MRIQ9BWK5 157 aa4.37□□□□□ -1.71
SNHG1-201ENST00000535076 DEFB129Q9H1M3 183 aa4.37□□□□□ -1.71
SNHG1-201ENST00000535076 MANBALQ9NQG1 85 aa4.37□□□□□ -1.71
SNHG1-201ENST00000535076 LAMP3Q9UQV4 416 aa4.37□□□□□ -1.71
SNHG1-201ENST00000535076 TP53TG1Q9Y2A0 90 aa4.37□□□□□ -1.71
SNHG1-201ENST00000535076 HES2Q9Y543 173 aa4.37□□□□□ -1.71
SNHG1-201ENST00000535076 HEBP2Q9Y5Z4 205 aa4.37□□□□□ -1.71
SNHG1-201ENST00000535076 SPCS1Q9Y6A9 102 aa4.37□□□□□ -1.71
SNHG1-201ENST00000535076 CCDC88CQ9P219 2028 aa4.37□□□□□ -1.71
SNHG1-201ENST00000535076 FNDC1Q4ZHG4 1894 aaPredicted RBP4.37□□□□□ -1.71
SNHG1-201ENST00000535076 ROBO1Q9Y6N7 1651 aa4.36□□□□□ -1.71
SNHG1-201ENST00000535076 MUC21A0A0G2JKD1 596 aa4.36□□□□□ -1.71
SNHG1-201ENST00000535076 MUC21A0A140T8X8 626 aa4.36□□□□□ -1.71
SNHG1-201ENST00000535076 FAM90A18PA6NE21 464 aa4.36□□□□□ -1.71
SNHG1-201ENST00000535076 FAM90A16PA6NEW6 464 aa4.36□□□□□ -1.71
SNHG1-201ENST00000535076 FAM90A9PA6NNJ1 464 aa4.36□□□□□ -1.71
SNHG1-201ENST00000535076 ZNF850A8MQ14 1090 aa4.36□□□□□ -1.71
SNHG1-201ENST00000535076 FAM90A5PA8MXJ8 464 aa4.36□□□□□ -1.71
SNHG1-201ENST00000535076 FAM90A26D6RGX4 464 aa4.36□□□□□ -1.71
SNHG1-201ENST00000535076 K7EN84 100 aa4.36□□□□□ -1.71
SNHG1-201ENST00000535076 K7ENP7 123 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms