RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 KITLGP21583 273 aa2.56□□□□□ -2
USP48-215ENST00000534705 NFYBP25208 207 aa2.56□□□□□ -2
USP48-215ENST00000534705 G0S2P27469 103 aa2.56□□□□□ -2
USP48-215ENST00000534705 KDELR2P33947 212 aa2.56□□□□□ -2
USP48-215ENST00000534705 CDKN2CP42773 168 aa2.56□□□□□ -2
USP48-215ENST00000534705 XCR1P46094 333 aa2.56□□□□□ -2
USP48-215ENST00000534705 IDH3GP51553 393 aaPredicted RBP2.56□□□□□ -2
USP48-215ENST00000534705 CAV2P51636 162 aa2.56□□□□□ -2
USP48-215ENST00000534705 EMP2P54851 167 aa2.56□□□□□ -2
USP48-215ENST00000534705 H2BFSP57053 126 aa2.56□□□□□ -2
USP48-215ENST00000534705 MTPNP58546 118 aa2.56□□□□□ -2
USP48-215ENST00000534705 ACTBP60709 375 aa2.56□□□□□ -2
USP48-215ENST00000534705 RAB8AP61006 207 aa2.56□□□□□ -2
USP48-215ENST00000534705 ARF6P62330 175 aa2.56□□□□□ -2
USP48-215ENST00000534705 SELENOTP62341 195 aa2.56□□□□□ -2
USP48-215ENST00000534705 ACTA2P62736 377 aa2.56□□□□□ -2
USP48-215ENST00000534705 ACTG1P63261 375 aa2.56□□□□□ -2
USP48-215ENST00000534705 ACTG2P63267 376 aa2.56□□□□□ -2
USP48-215ENST00000534705 ACTC1P68032 377 aa2.56□□□□□ -2
USP48-215ENST00000534705 ACTA1P68133 377 aa2.56□□□□□ -2
USP48-215ENST00000534705 IGLV3-21P80748 117 aaPredicted RBP2.56□□□□□ -2
USP48-215ENST00000534705 FABP5Q01469 135 aa2.56□□□□□ -2
USP48-215ENST00000534705 RAB40BQ12829 278 aa2.56□□□□□ -2
USP48-215ENST00000534705 PRDX4Q13162 271 aa2.56□□□□□ -2
USP48-215ENST00000534705 SLC17A1Q14916 467 aa2.56□□□□□ -2
USP48-215ENST00000534705 SLC10A1Q14973 349 aa2.56□□□□□ -2
USP48-215ENST00000534705 HMGN3Q15651 99 aa2.56□□□□□ -2
USP48-215ENST00000534705 IGFBP7Q16270 282 aa2.56□□□□□ -2
USP48-215ENST00000534705 NDUFA9Q16795 377 aa2.56□□□□□ -2
USP48-215ENST00000534705 NDUFAF6Q330K2 333 aa2.56□□□□□ -2
USP48-215ENST00000534705 DEFB134Q4QY38 66 aa2.56□□□□□ -2
USP48-215ENST00000534705 TP53I3Q53FA7 332 aa2.56□□□□□ -2
USP48-215ENST00000534705 LY6G6FQ5SQ64 297 aa2.56□□□□□ -2
USP48-215ENST00000534705 STUMQ69YW2 141 aa2.56□□□□□ -2
USP48-215ENST00000534705 C22orf42Q6IC83 251 aa2.56□□□□□ -2
USP48-215ENST00000534705 OR8G2PQ6IF36 304 aa2.56□□□□□ -2
USP48-215ENST00000534705 LRRN1Q6UXK5 716 aa2.56□□□□□ -2
USP48-215ENST00000534705 TMIGD1Q6UXZ0 262 aa2.56□□□□□ -2
USP48-215ENST00000534705 FBXW12Q6X9E4 464 aa2.56□□□□□ -2
USP48-215ENST00000534705 DGAT2L6Q6ZPD8 337 aa2.56□□□□□ -2
USP48-215ENST00000534705 Q6ZS92 163 aa2.56□□□□□ -2
USP48-215ENST00000534705 NDUFAF7Q7L592 441 aa2.56□□□□□ -2
USP48-215ENST00000534705 C17orf78Q8N4C9 275 aa2.56□□□□□ -2
USP48-215ENST00000534705 JAGN1Q8N5M9 183 aa2.56□□□□□ -2
USP48-215ENST00000534705 ACBD7Q8N6N7 88 aa2.56□□□□□ -2
USP48-215ENST00000534705 UBAC2Q8NBM4 344 aa2.56□□□□□ -2
USP48-215ENST00000534705 INO80EQ8NBZ0 244 aaPredicted RBP2.56□□□□□ -2
USP48-215ENST00000534705 APCDD1LQ8NCL9 501 aa2.56□□□□□ -2
USP48-215ENST00000534705 OR5T1Q8NG75 326 aa2.56□□□□□ -2
USP48-215ENST00000534705 OR2M7Q8NG81 312 aa2.56□□□□□ -2
USP48-215ENST00000534705 OR4K5Q8NGD3 323 aa2.56□□□□□ -2
USP48-215ENST00000534705 OR2D3Q8NGH3 330 aa2.56□□□□□ -2
USP48-215ENST00000534705 OR51L1Q8NGJ5 315 aa2.56□□□□□ -2
USP48-215ENST00000534705 OR5L2Q8NGL0 311 aa2.56□□□□□ -2
USP48-215ENST00000534705 OR10A6Q8NH74 314 aa2.56□□□□□ -2
USP48-215ENST00000534705 NUBPLQ8TB37 319 aa2.56□□□□□ -2
USP48-215ENST00000534705 STAG3L4Q8TBR4 150 aa2.56□□□□□ -2
USP48-215ENST00000534705 MRAPQ8TCY5 172 aa2.56□□□□□ -2
USP48-215ENST00000534705 ARL11Q969Q4 196 aa2.56□□□□□ -2
USP48-215ENST00000534705 RERGQ96A58 199 aaPredicted RBP2.56□□□□□ -2
USP48-215ENST00000534705 CYYR1Q96J86 154 aa2.56□□□□□ -2
USP48-215ENST00000534705 ZNF382Q96SR6 550 aa2.56□□□□□ -2
USP48-215ENST00000534705 CNN2Q99439 309 aaKnown RBP2.56□□□□□ -2
USP48-215ENST00000534705 STACQ99469 402 aa2.56□□□□□ -2
USP48-215ENST00000534705 S100A13Q99584 98 aa2.56□□□□□ -2
USP48-215ENST00000534705 AIF1LQ9BQI0 150 aa2.56□□□□□ -2
USP48-215ENST00000534705 ADAT1Q9BUB4 502 aaKnown RBP2.56□□□□□ -2
USP48-215ENST00000534705 EFCAB11Q9BUY7 163 aa2.56□□□□□ -2
USP48-215ENST00000534705 FAIM2Q9BWQ8 316 aa2.56□□□□□ -2
USP48-215ENST00000534705 MFFQ9GZY8 342 aa2.56□□□□□ -2
USP48-215ENST00000534705 C20orf85Q9H1P6 137 aa2.56□□□□□ -2
USP48-215ENST00000534705 CLMPQ9H6B4 373 aa2.56□□□□□ -2
USP48-215ENST00000534705 Q9HAA7 133 aa2.56□□□□□ -2
USP48-215ENST00000534705 TMEM27Q9HBJ8 222 aa2.56□□□□□ -2
USP48-215ENST00000534705 NOX3Q9HBY0 568 aa2.56□□□□□ -2
USP48-215ENST00000534705 SLC2A9Q9NRM0 540 aa2.56□□□□□ -2
USP48-215ENST00000534705 UBQLN4Q9NRR5 601 aa2.56□□□□□ -2
USP48-215ENST00000534705 MS4A12Q9NXJ0 267 aa2.56□□□□□ -2
USP48-215ENST00000534705 DOK5Q9P104 306 aa2.56□□□□□ -2
USP48-215ENST00000534705 SMPXQ9UHP9 88 aa2.56□□□□□ -2
USP48-215ENST00000534705 PRO0461Q9UI25 63 aa2.56□□□□□ -2
USP48-215ENST00000534705 OR52A1Q9UKL2 312 aa2.56□□□□□ -2
USP48-215ENST00000534705 PCTPQ9UKL6 214 aa2.56□□□□□ -2
USP48-215ENST00000534705 TNFSF18Q9UNG2 199 aa2.56□□□□□ -2
USP48-215ENST00000534705 AK6Q9Y3D8 172 aaKnown RBP2.56□□□□□ -2
USP48-215ENST00000534705 HDGFL3Q9Y3E1 203 aa2.56□□□□□ -2
USP48-215ENST00000534705 ANKRD17O75179 2603 aaKnown RBP2.56□□□□□ -2
USP48-215ENST00000534705 FBN2P35556 2912 aa2.56□□□□□ -2
USP48-215ENST00000534705 DSCAMO60469 2012 aa2.56□□□□□ -2
USP48-215ENST00000534705 CSMD2Q7Z408 3487 aa2.55□□□□□ -2
USP48-215ENST00000534705 CSMD1Q96PZ7 3565 aa2.55□□□□□ -2
USP48-215ENST00000534705 A0A0A6YYD5 115 aa2.55□□□□□ -2
USP48-215ENST00000534705 NSG1A0A0A6YYJ2 146 aa2.55□□□□□ -2
USP48-215ENST00000534705 TRBV7-9A0A0J9YWB2 115 aa2.55□□□□□ -2
USP48-215ENST00000534705 OR5H1A6NKK0 313 aa2.55□□□□□ -2
USP48-215ENST00000534705 FAM183AA6NL82 134 aa2.55□□□□□ -2
USP48-215ENST00000534705 OR2AT4A6NND4 320 aa2.55□□□□□ -2
USP48-215ENST00000534705 J3QRE1 110 aa2.55□□□□□ -2
USP48-215ENST00000534705 M0R143 59 aa2.55□□□□□ -2
USP48-215ENST00000534705 SULT2B1O00204 365 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms