RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 SLC25A42Q86VD7 318 aa8.09□□□□□ -1.11
CSDE1-217ENST00000534699 LINC01548A6NM66 108 aa8.09□□□□□ -1.11
CSDE1-217ENST00000534699 H7C2Y5 167 aa8.09□□□□□ -1.11
CSDE1-217ENST00000534699 ZP3P21754 424 aa8.09□□□□□ -1.11
CSDE1-217ENST00000534699 UBE2KP61086 200 aa8.09□□□□□ -1.11
CSDE1-217ENST00000534699 KLK9Q2XQG4 91 aa8.09□□□□□ -1.11
CSDE1-217ENST00000534699 HACD4Q5VWC8 232 aa8.09□□□□□ -1.11
CSDE1-217ENST00000534699 OR6Q1Q8NGQ2 317 aa8.09□□□□□ -1.11
CSDE1-217ENST00000534699 OR2K2Q8NGT1 345 aa8.09□□□□□ -1.11
CSDE1-217ENST00000534699 TXNL4BQ9NX01 149 aaKnown RBP8.09□□□□□ -1.11
CSDE1-217ENST00000534699 METTL1Q9UBP6 276 aaKnown RBP8.09□□□□□ -1.11
CSDE1-217ENST00000534699 KLK9Q9UKQ9 250 aa8.09□□□□□ -1.11
CSDE1-217ENST00000534699 MRPS7Q9Y2R9 242 aaKnown RBP8.09□□□□□ -1.11
CSDE1-217ENST00000534699 OR8U9P0C7N5 309 aa8.08□□□□□ -1.12
CSDE1-217ENST00000534699 RPS16P62249 146 aaKnown RBP8.08□□□□□ -1.12
CSDE1-217ENST00000534699 ARFRP1Q13795 201 aa8.08□□□□□ -1.12
CSDE1-217ENST00000534699 HES5Q5TA89 166 aa8.08□□□□□ -1.12
CSDE1-217ENST00000534699 ZNF383Q8NA42 475 aa8.08□□□□□ -1.12
CSDE1-217ENST00000534699 ARPC1AQ92747 370 aa8.08□□□□□ -1.12
CSDE1-217ENST00000534699 ABHD14BQ96IU4 210 aa8.08□□□□□ -1.12
CSDE1-217ENST00000534699 CMTM3Q96MX0 182 aa8.08□□□□□ -1.12
CSDE1-217ENST00000534699 ELOVL1Q9BW60 279 aa8.08□□□□□ -1.12
CSDE1-217ENST00000534699 SIGLEC8Q9NYZ4 499 aa8.08□□□□□ -1.12
CSDE1-217ENST00000534699 IGKV1-6A0A0C4DH72 117 aa8.08□□□□□ -1.12
CSDE1-217ENST00000534699 SEC14L6B5MCN3 397 aa8.08□□□□□ -1.12
CSDE1-217ENST00000534699 KRTAP10-11P60412 298 aa8.08□□□□□ -1.12
CSDE1-217ENST00000534699 VAX1Q5SQQ9 334 aa8.08□□□□□ -1.12
CSDE1-217ENST00000534699 VSTM2AQ8TAG5 236 aa8.08□□□□□ -1.12
CSDE1-217ENST00000534699 HSD17B10Q99714 261 aaKnown RBP8.08□□□□□ -1.12
CSDE1-217ENST00000534699 GINS4Q9BRT9 223 aa8.08□□□□□ -1.12
CSDE1-217ENST00000534699 OR1A1Q9P1Q5 309 aa8.08□□□□□ -1.12
CSDE1-217ENST00000534699 KCNK7Q9Y2U2 307 aa8.08□□□□□ -1.12
CSDE1-217ENST00000534699 PRELID3BQ9Y3B1 194 aa8.08□□□□□ -1.12
CSDE1-217ENST00000534699 OVOL1O14753 267 aa8.07□□□□□ -1.12
CSDE1-217ENST00000534699 AIREO43918 545 aa8.07□□□□□ -1.12
CSDE1-217ENST00000534699 HLA-DQB1P01920 261 aa8.07□□□□□ -1.12
CSDE1-217ENST00000534699 EGR2P11161 476 aaPredicted RBP8.07□□□□□ -1.12
CSDE1-217ENST00000534699 RPL39P5Q59GN2 51 aa8.07□□□□□ -1.12
CSDE1-217ENST00000534699 ZNF66Q6ZN08 573 aa8.07□□□□□ -1.12
CSDE1-217ENST00000534699 OVCH2Q7RTZ1 564 aa8.07□□□□□ -1.12
CSDE1-217ENST00000534699 ZNF645Q8N7E2 425 aa8.07□□□□□ -1.12
CSDE1-217ENST00000534699 OR11H1Q8NG94 326 aa8.07□□□□□ -1.12
CSDE1-217ENST00000534699 OR4A5Q8NH83 315 aa8.07□□□□□ -1.12
CSDE1-217ENST00000534699 DDB2Q92466 427 aa8.07□□□□□ -1.12
CSDE1-217ENST00000534699 FBXL15Q9H469 300 aa8.07□□□□□ -1.12
CSDE1-217ENST00000534699 TPSG1Q9NRR2 321 aa8.07□□□□□ -1.12
CSDE1-217ENST00000534699 ZNF256Q9Y2P7 627 aaPredicted RBP8.07□□□□□ -1.12
CSDE1-217ENST00000534699 M0R1X1 148 aa8.07□□□□□ -1.12
CSDE1-217ENST00000534699 CD36P16671 472 aa8.07□□□□□ -1.12
CSDE1-217ENST00000534699 ACTBL2Q562R1 376 aa8.07□□□□□ -1.12
CSDE1-217ENST00000534699 THOC7Q6I9Y2 204 aaKnown RBP8.07□□□□□ -1.12
CSDE1-217ENST00000534699 FAM53AQ6NSI3 398 aaPredicted RBP8.07□□□□□ -1.12
CSDE1-217ENST00000534699 UNQ5815/PRO19632Q6UWF5 114 aa8.07□□□□□ -1.12
CSDE1-217ENST00000534699 SRSF8Q9BRL6 282 aaKnown RBP8.07□□□□□ -1.12
CSDE1-217ENST00000534699 ATG5Q9H1Y0 275 aa8.07□□□□□ -1.12
CSDE1-217ENST00000534699 RANGRFQ9HD47 186 aaPredicted RBP8.07□□□□□ -1.12
CSDE1-217ENST00000534699 VCX3AQ9NNX9 186 aa8.07□□□□□ -1.12
CSDE1-217ENST00000534699 SDHAF2Q9NX18 166 aa8.07□□□□□ -1.12
CSDE1-217ENST00000534699 OR2W1Q9Y3N9 320 aa8.07□□□□□ -1.12
CSDE1-217ENST00000534699 LSM4Q9Y4Z0 139 aaKnown RBP8.07□□□□□ -1.12
CSDE1-217ENST00000534699 MEGF8Q7Z7M0 2845 aa8.06□□□□□ -1.12
CSDE1-217ENST00000534699 A8MZ25 164 aa8.06□□□□□ -1.12
CSDE1-217ENST00000534699 PROP1O75360 226 aa8.06□□□□□ -1.12
CSDE1-217ENST00000534699 TATDN3Q17R31 274 aa8.06□□□□□ -1.12
CSDE1-217ENST00000534699 POC5Q8NA72 575 aa8.06□□□□□ -1.12
CSDE1-217ENST00000534699 CMYA5Q8N3K9 4069 aa8.06□□□□□ -1.12
CSDE1-217ENST00000534699 C13orf42A0A1B0GVH6 325 aa8.06□□□□□ -1.12
CSDE1-217ENST00000534699 FAM223BA6NKX1 122 aa8.06□□□□□ -1.12
CSDE1-217ENST00000534699 RBFOX2O43251 390 aaKnown RBP eCLIP8.06□□□□□ -1.123e-6■■■■□ 22.3
CSDE1-217ENST00000534699 TPPPO94811 219 aa8.06□□□□□ -1.12
CSDE1-217ENST00000534699 IGLV2-23P01705 113 aa8.06□□□□□ -1.12
CSDE1-217ENST00000534699 GSTT2P0CG29 244 aa8.06□□□□□ -1.12
CSDE1-217ENST00000534699 GSTT2BP0CG30 244 aa8.06□□□□□ -1.12
CSDE1-217ENST00000534699 FXYD3Q14802 87 aa8.06□□□□□ -1.12
CSDE1-217ENST00000534699 CDK10Q15131 360 aa8.06□□□□□ -1.12
CSDE1-217ENST00000534699 CDNFQ49AH0 187 aa8.06□□□□□ -1.12
CSDE1-217ENST00000534699 C22orf42Q6IC83 251 aa8.06□□□□□ -1.12
CSDE1-217ENST00000534699 FAM223AQ8IWN6 122 aa8.06□□□□□ -1.12
CSDE1-217ENST00000534699 MMD2Q8IY49 270 aa8.06□□□□□ -1.12
CSDE1-217ENST00000534699 HDHD3Q9BSH5 251 aaPredicted RBP8.06□□□□□ -1.12
CSDE1-217ENST00000534699 TINAGL1Q9GZM7 467 aaPredicted RBP8.06□□□□□ -1.12
CSDE1-217ENST00000534699 OR2D2Q9H210 308 aa8.06□□□□□ -1.12
CSDE1-217ENST00000534699 DIABLOQ9NR28 239 aa8.06□□□□□ -1.12
CSDE1-217ENST00000534699 LINC00527Q9UJ94 153 aa8.06□□□□□ -1.12
CSDE1-217ENST00000534699 A0A1W2PN81 502 aa8.06□□□□□ -1.12
CSDE1-217ENST00000534699 ANKRD65E5RJM6 399 aa8.06□□□□□ -1.12
CSDE1-217ENST00000534699 CA2P00918 260 aa8.06□□□□□ -1.12
CSDE1-217ENST00000534699 CNTFRP26992 372 aa8.06□□□□□ -1.12
CSDE1-217ENST00000534699 PSMB9P28065 219 aa8.06□□□□□ -1.12
CSDE1-217ENST00000534699 DUTP33316 252 aaKnown RBP8.06□□□□□ -1.12
CSDE1-217ENST00000534699 CHRNA7P36544 502 aa8.06□□□□□ -1.12
CSDE1-217ENST00000534699 GNG2P59768 71 aa8.06□□□□□ -1.12
CSDE1-217ENST00000534699 ACSM6Q6P461 480 aa8.06□□□□□ -1.12
CSDE1-217ENST00000534699 SFXN4Q6P4A7 337 aa8.06□□□□□ -1.12
CSDE1-217ENST00000534699 KCTD12Q96CX2 325 aaKnown RBP8.06□□□□□ -1.12
CSDE1-217ENST00000534699 KCNK15Q9H427 330 aa8.06□□□□□ -1.12
CSDE1-217ENST00000534699 GNB4Q9HAV0 340 aa8.06□□□□□ -1.12
CSDE1-217ENST00000534699 SCOCQ9UIL1 159 aa8.06□□□□□ -1.12
CSDE1-217ENST00000534699 WI2-2373I1.2A0A1W2PRP0 233 aa8.05□□□□□ -1.12
CSDE1-217ENST00000534699 TUSC2O75896 110 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms