RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 ZNF383Q8NA42 475 aa10.57□□□□□ -0.72
CAPN1-227ENST00000533909 NPBQ8NG41 125 aa10.57□□□□□ -0.72
CAPN1-227ENST00000533909 ADTRPQ96IZ2 230 aa10.57□□□□□ -0.72
CAPN1-227ENST00000533909 RNF5Q99942 180 aa10.57□□□□□ -0.72
CAPN1-227ENST00000533909 HSPB9Q9BQS6 159 aa10.57□□□□□ -0.72
CAPN1-227ENST00000533909 NECAP2Q9NVZ3 263 aa10.57□□□□□ -0.72
CAPN1-227ENST00000533909 MEIS3P1A6NDR6 274 aa10.56□□□□□ -0.72
CAPN1-227ENST00000533909 LINC01548A6NM66 108 aa10.56□□□□□ -0.72
CAPN1-227ENST00000533909 NUDT19A8MXV4 375 aa10.56□□□□□ -0.72
CAPN1-227ENST00000533909 TUSC2O75896 110 aa10.56□□□□□ -0.72
CAPN1-227ENST00000533909 HLA-DRB1P01911 266 aa10.56□□□□□ -0.72
CAPN1-227ENST00000533909 APOA1P02647 267 aa10.56□□□□□ -0.72
CAPN1-227ENST00000533909 PF4P02776 101 aa10.56□□□□□ -0.72
CAPN1-227ENST00000533909 EIF4EP06730 217 aaKnown RBP10.56□□□□□ -0.72
CAPN1-227ENST00000533909 RRASP10301 218 aa10.56□□□□□ -0.72
CAPN1-227ENST00000533909 PTHLHP12272 177 aa10.56□□□□□ -0.72
CAPN1-227ENST00000533909 ZNF182P17025 639 aaPredicted RBP10.56□□□□□ -0.72
CAPN1-227ENST00000533909 ALDH3B2P48448 385 aa10.56□□□□□ -0.72
CAPN1-227ENST00000533909 ZNF645Q8N7E2 425 aa10.56□□□□□ -0.72
CAPN1-227ENST00000533909 CMTM3Q96MX0 182 aa10.56□□□□□ -0.72
CAPN1-227ENST00000533909 FBXL15Q9H469 300 aa10.56□□□□□ -0.72
CAPN1-227ENST00000533909 METTL1Q9UBP6 276 aaKnown RBP10.56□□□□□ -0.72
CAPN1-227ENST00000533909 GAB2Q9UQC2 676 aa10.56□□□□□ -0.72
CAPN1-227ENST00000533909 HPGDSO60760 199 aa10.55□□□□□ -0.72
CAPN1-227ENST00000533909 SPDEFO95238 335 aa10.55□□□□□ -0.72
CAPN1-227ENST00000533909 HLA-DQB1P01920 261 aa10.55□□□□□ -0.72
CAPN1-227ENST00000533909 IGKV1-16P04430 117 aa10.55□□□□□ -0.72
CAPN1-227ENST00000533909 FCGR2CP31995 323 aa10.55□□□□□ -0.72
CAPN1-227ENST00000533909 RPL5P46777 297 aaKnown RBP10.55□□□□□ -0.72
CAPN1-227ENST00000533909 LINC00205P59089 165 aa10.55□□□□□ -0.72
CAPN1-227ENST00000533909 CXorf66Q5JRM2 361 aaPredicted RBP10.55□□□□□ -0.72
CAPN1-227ENST00000533909 BVESQ8NE79 360 aa10.55□□□□□ -0.72
CAPN1-227ENST00000533909 RAB2BQ8WUD1 216 aa10.55□□□□□ -0.72
CAPN1-227ENST00000533909 CLCC1Q96S66 551 aa10.55□□□□□ -0.72
CAPN1-227ENST00000533909 DCUN1D5Q9BTE7 237 aa10.55□□□□□ -0.72
CAPN1-227ENST00000533909 OR51J1Q9H342 316 aa10.55□□□□□ -0.72
CAPN1-227ENST00000533909 SCOCQ9UIL1 159 aa10.55□□□□□ -0.72
CAPN1-227ENST00000533909 PRELID3BQ9Y3B1 194 aa10.55□□□□□ -0.72
CAPN1-227ENST00000533909 MEGF8Q7Z7M0 2845 aa10.54□□□□□ -0.72
CAPN1-227ENST00000533909 SHOXO15266 292 aa10.54□□□□□ -0.72
CAPN1-227ENST00000533909 SLC25A17O43808 307 aa10.54□□□□□ -0.72
CAPN1-227ENST00000533909 PROP1O75360 226 aa10.54□□□□□ -0.72
CAPN1-227ENST00000533909 NDUFA3O95167 84 aa10.54□□□□□ -0.72
CAPN1-227ENST00000533909 IGF1P05019 195 aa10.54□□□□□ -0.72
CAPN1-227ENST00000533909 ELK1P19419 428 aa10.54□□□□□ -0.72
CAPN1-227ENST00000533909 LGALS7P47929 136 aa10.54□□□□□ -0.72
CAPN1-227ENST00000533909 HERV-K104P61576 105 aa10.54□□□□□ -0.72
CAPN1-227ENST00000533909 PSG5Q15238 335 aa10.54□□□□□ -0.72
CAPN1-227ENST00000533909 TCTEX1D4Q5JR98 221 aa10.54□□□□□ -0.72
CAPN1-227ENST00000533909 TMEM65Q6PI78 240 aa10.54□□□□□ -0.72
CAPN1-227ENST00000533909 KCTD9Q7L273 389 aa10.54□□□□□ -0.72
CAPN1-227ENST00000533909 SNX29P2Q8IUI4 249 aa10.54□□□□□ -0.72
CAPN1-227ENST00000533909 OR5AP2Q8NGF4 316 aa10.54□□□□□ -0.72
CAPN1-227ENST00000533909 SECTM1Q8WVN6 248 aa10.54□□□□□ -0.72
CAPN1-227ENST00000533909 HARBI1Q96MB7 349 aa10.54□□□□□ -0.72
CAPN1-227ENST00000533909 EHFQ9NZC4 300 aa10.54□□□□□ -0.72
CAPN1-227ENST00000533909 WSB1Q9Y6I7 421 aa10.54□□□□□ -0.72
CAPN1-227ENST00000533909 A3GALT2U3KPV4 340 aa10.54□□□□□ -0.72
CAPN1-227ENST00000533909 IGHV7-81A0A0B4J1V7 117 aa10.53□□□□□ -0.72
CAPN1-227ENST00000533909 TRAV41A0A0B4J266 112 aa10.53□□□□□ -0.72
CAPN1-227ENST00000533909 ATP6V0E1O15342 81 aa10.53□□□□□ -0.72
CAPN1-227ENST00000533909 RGS5O15539 181 aa10.53□□□□□ -0.72
CAPN1-227ENST00000533909 CNIH1O95406 144 aa10.53□□□□□ -0.72
CAPN1-227ENST00000533909 AADACP22760 399 aa10.53□□□□□ -0.72
CAPN1-227ENST00000533909 DUTP33316 252 aaKnown RBP10.53□□□□□ -0.72
CAPN1-227ENST00000533909 TMBIM6P55061 237 aa10.53□□□□□ -0.72
CAPN1-227ENST00000533909 TAS2R46P59540 309 aa10.53□□□□□ -0.72
CAPN1-227ENST00000533909 FXYD4P59646 89 aa10.53□□□□□ -0.72
CAPN1-227ENST00000533909 RPL23AP62750 156 aaKnown RBP10.53□□□□□ -0.72
CAPN1-227ENST00000533909 GNB1P62873 340 aa10.53□□□□□ -0.72
CAPN1-227ENST00000533909 TMEM267Q0VDI3 215 aaPredicted RBP10.53□□□□□ -0.72
CAPN1-227ENST00000533909 FOXE3Q13461 319 aa10.53□□□□□ -0.72
CAPN1-227ENST00000533909 CDK10Q15131 360 aa10.53□□□□□ -0.72
CAPN1-227ENST00000533909 ECSCRQ19T08 205 aa10.53□□□□□ -0.72
CAPN1-227ENST00000533909 ZNF660Q6AZW8 331 aaPredicted RBP10.53□□□□□ -0.72
CAPN1-227ENST00000533909 KLHL30-AS1Q8NEE0 82 aa10.53□□□□□ -0.72
CAPN1-227ENST00000533909 OR5H2Q8NGV7 314 aa10.53□□□□□ -0.72
CAPN1-227ENST00000533909 TCTEX1D2Q8WW35 142 aa10.53□□□□□ -0.72
CAPN1-227ENST00000533909 BCL7BQ9BQE9 202 aa10.53□□□□□ -0.72
CAPN1-227ENST00000533909 SCPEP1Q9HB40 452 aa10.53□□□□□ -0.72
CAPN1-227ENST00000533909 ZFP57Q9NU63 452 aa10.53□□□□□ -0.72
CAPN1-227ENST00000533909 RBMX2Q9Y388 322 aaKnown RBP10.53□□□□□ -0.72
CAPN1-227ENST00000533909 NOTCH3Q9UM47 2321 aa10.53□□□□□ -0.72
CAPN1-227ENST00000533909 IGKV1D-13A0A0B4J2D9 117 aa10.52□□□□□ -0.73
CAPN1-227ENST00000533909 ADARB2-AS1A8MUL3 147 aa10.52□□□□□ -0.73
CAPN1-227ENST00000533909 CRYZL1O95825 349 aa10.52□□□□□ -0.73
CAPN1-227ENST00000533909 PPYP01298 95 aa10.52□□□□□ -0.73
CAPN1-227ENST00000533909 ELANEP08246 267 aa10.52□□□□□ -0.73
CAPN1-227ENST00000533909 IGKV1-13P0DP09 117 aa10.52□□□□□ -0.73
CAPN1-227ENST00000533909 CD33P20138 364 aa10.52□□□□□ -0.73
CAPN1-227ENST00000533909 CD40LGP29965 261 aa10.52□□□□□ -0.73
CAPN1-227ENST00000533909 CX3CL1P78423 397 aa10.52□□□□□ -0.73
CAPN1-227ENST00000533909 VMA21Q3ZAQ7 101 aa10.52□□□□□ -0.73
CAPN1-227ENST00000533909 OR2B11Q5JQS5 317 aa10.52□□□□□ -0.73
CAPN1-227ENST00000533909 SNAPC3Q92966 411 aa10.52□□□□□ -0.73
CAPN1-227ENST00000533909 BORCS5Q969J3 196 aa10.52□□□□□ -0.73
CAPN1-227ENST00000533909 C5orf30Q96GV9 206 aa10.52□□□□□ -0.73
CAPN1-227ENST00000533909 HSD17B10Q99714 261 aaKnown RBP10.52□□□□□ -0.73
CAPN1-227ENST00000533909 SLC5A7Q9GZV3 580 aa10.52□□□□□ -0.73
CAPN1-227ENST00000533909 TAS2R8Q9NYW2 309 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms