RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 GSTT2BP0CG30 244 aa18.22■□□□□ 0.51
SMPD1-209ENST00000533196 GNB3P16520 340 aa18.22■□□□□ 0.51
SMPD1-209ENST00000533196 CHRNA7P36544 502 aa18.22■□□□□ 0.51
SMPD1-209ENST00000533196 INSL3P51460 131 aa18.22■□□□□ 0.51
SMPD1-209ENST00000533196 RPS16P62249 146 aaKnown RBP18.22■□□□□ 0.51
SMPD1-209ENST00000533196 TPRA1Q86W33 373 aa18.22■□□□□ 0.51
SMPD1-209ENST00000533196 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.22■□□□□ 0.51
SMPD1-209ENST00000533196 NOTOA8MTQ0 251 aa18.21■□□□□ 0.51
SMPD1-209ENST00000533196 BET1O15155 118 aa18.21■□□□□ 0.51
SMPD1-209ENST00000533196 IGKV1-16P04430 117 aa18.21■□□□□ 0.51
SMPD1-209ENST00000533196 EGR2P11161 476 aaPredicted RBP18.21■□□□□ 0.51
SMPD1-209ENST00000533196 PSMB9P28065 219 aa18.21■□□□□ 0.51
SMPD1-209ENST00000533196 TALDO1P37837 337 aa18.21■□□□□ 0.51
SMPD1-209ENST00000533196 LGALS7P47929 136 aa18.21■□□□□ 0.51
SMPD1-209ENST00000533196 LUMP51884 338 aaPredicted RBP18.21■□□□□ 0.51
SMPD1-209ENST00000533196 IGSF11Q5DX21 431 aa18.21■□□□□ 0.51
SMPD1-209ENST00000533196 PPP1R27Q86WC6 154 aa18.21■□□□□ 0.51
SMPD1-209ENST00000533196 ABHD5Q8WTS1 349 aa18.21■□□□□ 0.51
SMPD1-209ENST00000533196 B9D2Q9BPU9 175 aa18.21■□□□□ 0.51
SMPD1-209ENST00000533196 SLC35D1Q9NTN3 355 aa18.21■□□□□ 0.51
SMPD1-209ENST00000533196 STUB1Q9UNE7 303 aa18.21■□□□□ 0.51
SMPD1-209ENST00000533196 A0A075B6Q4 140 aa18.2■□□□□ 0.5
SMPD1-209ENST00000533196 SOX15O60248 233 aa18.2■□□□□ 0.5
SMPD1-209ENST00000533196 OR8U9P0C7N5 309 aa18.2■□□□□ 0.5
SMPD1-209ENST00000533196 CD40LGP29965 261 aa18.2■□□□□ 0.5
SMPD1-209ENST00000533196 ARFRP1Q13795 201 aa18.2■□□□□ 0.5
SMPD1-209ENST00000533196 NR2C2APQ86WQ0 139 aa18.2■□□□□ 0.5
SMPD1-209ENST00000533196 OR2D2Q9H210 308 aa18.2■□□□□ 0.5
SMPD1-209ENST00000533196 TXNL4BQ9NX01 149 aaKnown RBP18.2■□□□□ 0.5
SMPD1-209ENST00000533196 SDHAF2Q9NX18 166 aa18.2■□□□□ 0.5
SMPD1-209ENST00000533196 SCGNO76038 276 aa18.19■□□□□ 0.5
SMPD1-209ENST00000533196 CA2P00918 260 aa18.19■□□□□ 0.5
SMPD1-209ENST00000533196 DTYMKP23919 212 aa18.19■□□□□ 0.5
SMPD1-209ENST00000533196 GNB1P62873 340 aa18.19■□□□□ 0.5
SMPD1-209ENST00000533196 ACTBL2Q562R1 376 aa18.19■□□□□ 0.5
SMPD1-209ENST00000533196 ASPHD1Q5U4P2 390 aa18.19■□□□□ 0.5
SMPD1-209ENST00000533196 UNQ5815/PRO19632Q6UWF5 114 aa18.19■□□□□ 0.5
SMPD1-209ENST00000533196 CLCC1Q96S66 551 aa18.19■□□□□ 0.5
SMPD1-209ENST00000533196 GINS4Q9BRT9 223 aa18.19■□□□□ 0.5
SMPD1-209ENST00000533196 ATG5Q9H1Y0 275 aa18.19■□□□□ 0.5
SMPD1-209ENST00000533196 SLA2Q9H6Q3 261 aa18.19■□□□□ 0.5
SMPD1-209ENST00000533196 SCOCQ9UIL1 159 aa18.19■□□□□ 0.5
SMPD1-209ENST00000533196 A3GALT2U3KPV4 340 aa18.19■□□□□ 0.5
SMPD1-209ENST00000533196 A0A0B4J203 849 aa18.18■□□□□ 0.5
SMPD1-209ENST00000533196 LGALS1P09382 135 aaKnown RBP18.18■□□□□ 0.5
SMPD1-209ENST00000533196 RRASP10301 218 aa18.18■□□□□ 0.5
SMPD1-209ENST00000533196 CD69Q07108 199 aa18.18■□□□□ 0.5
SMPD1-209ENST00000533196 CBX3Q13185 183 aa18.18■□□□□ 0.5
SMPD1-209ENST00000533196 ZNF260Q3ZCT1 412 aa18.18■□□□□ 0.5
SMPD1-209ENST00000533196 VAX1Q5SQQ9 334 aa18.18■□□□□ 0.5
SMPD1-209ENST00000533196 ARPC1AQ92747 370 aa18.18■□□□□ 0.5
SMPD1-209ENST00000533196 ZNF230Q9UIE0 474 aaPredicted RBP18.18■□□□□ 0.5
SMPD1-209ENST00000533196 SSR3Q9UNL2 185 aa18.18■□□□□ 0.5
SMPD1-209ENST00000533196 SLC25A17O43808 307 aa18.17■□□□□ 0.5
SMPD1-209ENST00000533196 LINC00205P59089 165 aa18.17■□□□□ 0.5
SMPD1-209ENST00000533196 LFNGQ8NES3 379 aa18.17■□□□□ 0.5
SMPD1-209ENST00000533196 MAFIPQ8WZ33 124 aa18.17■□□□□ 0.5
SMPD1-209ENST00000533196 ADTRPQ96IZ2 230 aa18.17■□□□□ 0.5
SMPD1-209ENST00000533196 TMEM68Q96MH6 324 aa18.17■□□□□ 0.5
SMPD1-209ENST00000533196 OR5B12Q96R08 314 aa18.17■□□□□ 0.5
SMPD1-209ENST00000533196 FAM103A1Q9BTL3 118 aaKnown RBP18.17■□□□□ 0.5
SMPD1-209ENST00000533196 DCSTAMPQ9H295 470 aa18.17■□□□□ 0.5
SMPD1-209ENST00000533196 RBM7Q9Y580 266 aaKnown RBP18.17■□□□□ 0.5
SMPD1-209ENST00000533196 LINC01619G3V211 115 aa18.16■□□□□ 0.5
SMPD1-209ENST00000533196 ARPC1BO15143 372 aaKnown RBP18.16■□□□□ 0.5
SMPD1-209ENST00000533196 IGLV2-23P01705 113 aa18.16■□□□□ 0.5
SMPD1-209ENST00000533196 CTXN2P0C2S0 81 aa18.16■□□□□ 0.5
SMPD1-209ENST00000533196 PITPNAQ00169 270 aa18.16■□□□□ 0.5
SMPD1-209ENST00000533196 FXYD3Q14802 87 aa18.16■□□□□ 0.5
SMPD1-209ENST00000533196 TMEM177Q53S58 311 aa18.16■□□□□ 0.5
SMPD1-209ENST00000533196 ZNF773Q6PK81 442 aa18.16■□□□□ 0.5
SMPD1-209ENST00000533196 ZNF429Q86V71 674 aa18.16■□□□□ 0.5
SMPD1-209ENST00000533196 H1FOOQ8IZA3 346 aaPredicted RBP18.16■□□□□ 0.5
SMPD1-209ENST00000533196 H3BUA1 57 aa18.15■□□□□ 0.5
SMPD1-209ENST00000533196 OVOL1O14753 267 aa18.15■□□□□ 0.5
SMPD1-209ENST00000533196 ECI1P42126 302 aa18.15■□□□□ 0.5
SMPD1-209ENST00000533196 RTL8BQ17RB0 113 aa18.15■□□□□ 0.5
SMPD1-209ENST00000533196 CDNFQ49AH0 187 aa18.15■□□□□ 0.5
SMPD1-209ENST00000533196 HACD4Q5VWC8 232 aa18.15■□□□□ 0.5
SMPD1-209ENST00000533196 HARBI1Q96MB7 349 aa18.15■□□□□ 0.5
SMPD1-209ENST00000533196 TPSG1Q9NRR2 321 aa18.15■□□□□ 0.5
SMPD1-209ENST00000533196 LSM4Q9Y4Z0 139 aaKnown RBP18.15■□□□□ 0.5
SMPD1-209ENST00000533196 TNCP24821 2201 aa18.14■□□□□ 0.49
SMPD1-209ENST00000533196 CRYGBP07316 175 aa18.14■□□□□ 0.49
SMPD1-209ENST00000533196 SCAND1P57086 179 aa18.14■□□□□ 0.49
SMPD1-209ENST00000533196 DCUN1D4Q92564 292 aa18.14■□□□□ 0.49
SMPD1-209ENST00000533196 RHOVQ96L33 236 aa18.14■□□□□ 0.49
SMPD1-209ENST00000533196 ZNF256Q9Y2P7 627 aaPredicted RBP18.14■□□□□ 0.49
SMPD1-209ENST00000533196 SMIM30A4D0T7 59 aa18.13■□□□□ 0.49
SMPD1-209ENST00000533196 SHOXO15266 292 aa18.13■□□□□ 0.49
SMPD1-209ENST00000533196 CNIH1O95406 144 aa18.13■□□□□ 0.49
SMPD1-209ENST00000533196 HSPB1P04792 205 aaKnown RBP18.13■□□□□ 0.49
SMPD1-209ENST00000533196 SFXN4Q6P4A7 337 aa18.13■□□□□ 0.49
SMPD1-209ENST00000533196 BVESQ8NE79 360 aa18.13■□□□□ 0.49
SMPD1-209ENST00000533196 C5orf30Q96GV9 206 aa18.13■□□□□ 0.49
SMPD1-209ENST00000533196 DAPK2Q9UIK4 370 aa18.13■□□□□ 0.49
SMPD1-209ENST00000533196 RRP15Q9Y3B9 282 aaKnown RBP18.13■□□□□ 0.49
SMPD1-209ENST00000533196 IGKV1D-8A0A087WSZ0 117 aa18.12■□□□□ 0.49
SMPD1-209ENST00000533196 SLC22A5O76082 557 aa18.12■□□□□ 0.49
SMPD1-209ENST00000533196 BRI3O95415 125 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms