RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 ETV7Q9Y603 341 aa23.66■■□□□ 1.38
SSSCA1-207ENST00000533115 TMEM235A6NFC5 223 aa23.65■■□□□ 1.38
SSSCA1-207ENST00000533115 IGLV1-40P01703 118 aa23.65■■□□□ 1.38
SSSCA1-207ENST00000533115 PITPNAQ00169 270 aa23.65■■□□□ 1.38
SSSCA1-207ENST00000533115 TMEM65Q6PI78 240 aa23.65■■□□□ 1.38
SSSCA1-207ENST00000533115 H1FOOQ8IZA3 346 aaPredicted RBP23.65■■□□□ 1.38
SSSCA1-207ENST00000533115 MINDY2Q8NBR6 621 aa23.65■■□□□ 1.38
SSSCA1-207ENST00000533115 TSPAN14Q8NG11 270 aa23.65■■□□□ 1.38
SSSCA1-207ENST00000533115 MYOZ3Q8TDC0 251 aa23.65■■□□□ 1.38
SSSCA1-207ENST00000533115 NUDCD2Q8WVJ2 157 aa23.65■■□□□ 1.38
SSSCA1-207ENST00000533115 SLC35D1Q9NTN3 355 aa23.65■■□□□ 1.38
SSSCA1-207ENST00000533115 FBXO7Q9Y3I1 522 aa23.65■■□□□ 1.38
SSSCA1-207ENST00000533115 A0A087WXM4 84 aa23.64■■□□□ 1.37
SSSCA1-207ENST00000533115 SPDEFO95238 335 aa23.64■■□□□ 1.37
SSSCA1-207ENST00000533115 TNFAIP8O95379 198 aa23.64■■□□□ 1.37
SSSCA1-207ENST00000533115 CRIP2P52943 208 aaPredicted RBP23.64■■□□□ 1.37
SSSCA1-207ENST00000533115 DEFB136Q30KP8 78 aa23.64■■□□□ 1.37
SSSCA1-207ENST00000533115 TIMM50Q3ZCQ8 353 aa23.64■■□□□ 1.37
SSSCA1-207ENST00000533115 OR5H6Q8NGV6 325 aa23.64■■□□□ 1.37
SSSCA1-207ENST00000533115 C4orf3Q8WVX3 66 aa23.64■■□□□ 1.37
SSSCA1-207ENST00000533115 FLYWCH2Q96CP2 140 aaKnown RBP23.64■■□□□ 1.37
SSSCA1-207ENST00000533115 C5orf30Q96GV9 206 aa23.64■■□□□ 1.37
SSSCA1-207ENST00000533115 GPR61Q9BZJ8 451 aa23.64■■□□□ 1.37
SSSCA1-207ENST00000533115 KLK15Q9H2R5 256 aa23.64■■□□□ 1.37
SSSCA1-207ENST00000533115 GNG2P59768 71 aa23.63■■□□□ 1.37
SSSCA1-207ENST00000533115 ECSCRQ19T08 205 aa23.63■■□□□ 1.37
SSSCA1-207ENST00000533115 CLCC1Q96S66 551 aa23.63■■□□□ 1.37
SSSCA1-207ENST00000533115 MCRIP2Q9BUT9 160 aaKnown RBP23.63■■□□□ 1.37
SSSCA1-207ENST00000533115 VCX3AQ9NNX9 186 aa23.63■■□□□ 1.37
SSSCA1-207ENST00000533115 C19orf54Q5BKX5 351 aa23.62■■□□□ 1.37
SSSCA1-207ENST00000533115 MRAPQ8TCY5 172 aa23.62■■□□□ 1.37
SSSCA1-207ENST00000533115 SLC25A38Q96DW6 304 aa23.62■■□□□ 1.37
SSSCA1-207ENST00000533115 SSX5O60225 188 aa23.61■■□□□ 1.37
SSSCA1-207ENST00000533115 CTXN2P0C2S0 81 aa23.61■■□□□ 1.37
SSSCA1-207ENST00000533115 EGR2P11161 476 aaPredicted RBP23.61■■□□□ 1.37
SSSCA1-207ENST00000533115 KIAA0141Q14154 515 aaPredicted RBP23.61■■□□□ 1.37
SSSCA1-207ENST00000533115 ZNF562Q6V9R5 426 aa23.61■■□□□ 1.37
SSSCA1-207ENST00000533115 ZNF491Q8N8L2 437 aa23.61■■□□□ 1.37
SSSCA1-207ENST00000533115 ABHD5Q8WTS1 349 aa23.61■■□□□ 1.37
SSSCA1-207ENST00000533115 UBE2E2Q96LR5 201 aa23.61■■□□□ 1.37
SSSCA1-207ENST00000533115 NUBP2Q9Y5Y2 271 aa23.61■■□□□ 1.37
SSSCA1-207ENST00000533115 TMEM127O75204 238 aa23.6■■□□□ 1.37
SSSCA1-207ENST00000533115 CA2P00918 260 aa23.6■■□□□ 1.37
SSSCA1-207ENST00000533115 RAB9AP51151 201 aa23.6■■□□□ 1.37
SSSCA1-207ENST00000533115 RAB25P57735 213 aa23.6■■□□□ 1.37
SSSCA1-207ENST00000533115 TAGLNQ01995 201 aaKnown RBP23.6■■□□□ 1.37
SSSCA1-207ENST00000533115 TCTEX1D1Q8N7M0 179 aa23.6■■□□□ 1.37
SSSCA1-207ENST00000533115 YIPF6Q96EC8 236 aa23.6■■□□□ 1.37
SSSCA1-207ENST00000533115 A3GALT2U3KPV4 340 aa23.6■■□□□ 1.37
SSSCA1-207ENST00000533115 SLC25A17O43808 307 aa23.59■■□□□ 1.37
SSSCA1-207ENST00000533115 AIREO43918 545 aa23.59■■□□□ 1.37
SSSCA1-207ENST00000533115 TGFBR1P36897 503 aa23.59■■□□□ 1.37
SSSCA1-207ENST00000533115 TMEM267Q0VDI3 215 aaPredicted RBP23.59■■□□□ 1.37
SSSCA1-207ENST00000533115 CNIH2Q6PI25 160 aa23.59■■□□□ 1.37
SSSCA1-207ENST00000533115 PPP1R27Q86WC6 154 aa23.59■■□□□ 1.37
SSSCA1-207ENST00000533115 FOXA2Q9Y261 457 aaPredicted RBP23.59■■□□□ 1.37
SSSCA1-207ENST00000533115 VSIG4Q9Y279 399 aa23.59■■□□□ 1.37
SSSCA1-207ENST00000533115 TRAV18A0A075B6X5 111 aa23.58■■□□□ 1.37
SSSCA1-207ENST00000533115 A0A0A6YYH2 397 aa23.58■■□□□ 1.37
SSSCA1-207ENST00000533115 A0A1W2PN81 502 aa23.58■■□□□ 1.37
SSSCA1-207ENST00000533115 A6NJ64 397 aa23.58■■□□□ 1.37
SSSCA1-207ENST00000533115 HOXD3P31249 432 aaPredicted RBP23.58■■□□□ 1.37
SSSCA1-207ENST00000533115 CHRNA7P36544 502 aa23.58■■□□□ 1.37
SSSCA1-207ENST00000533115 LGALS7P47929 136 aa23.58■■□□□ 1.37
SSSCA1-207ENST00000533115 KRTAP10-11P60412 298 aa23.58■■□□□ 1.37
SSSCA1-207ENST00000533115 EGFEM1PQ0D2K5 195 aa23.58■■□□□ 1.37
SSSCA1-207ENST00000533115 CBX3Q13185 183 aa23.58■■□□□ 1.37
SSSCA1-207ENST00000533115 BVESQ8NE79 360 aa23.58■■□□□ 1.37
SSSCA1-207ENST00000533115 DPF1Q92782 380 aa23.58■■□□□ 1.37
SSSCA1-207ENST00000533115 FAM103A1Q9BTL3 118 aaKnown RBP23.58■■□□□ 1.37
SSSCA1-207ENST00000533115 GNB4Q9HAV0 340 aa23.58■■□□□ 1.37
SSSCA1-207ENST00000533115 TPSG1Q9NRR2 321 aa23.58■■□□□ 1.37
SSSCA1-207ENST00000533115 ANXA10Q9UJ72 324 aa23.58■■□□□ 1.37
SSSCA1-207ENST00000533115 SPATA2Q9UM82 520 aa23.58■■□□□ 1.37
SSSCA1-207ENST00000533115 SOX15O60248 233 aa23.57■■□□□ 1.36
SSSCA1-207ENST00000533115 IGLV2-23P01705 113 aa23.57■■□□□ 1.36
SSSCA1-207ENST00000533115 DUTP33316 252 aaKnown RBP23.57■■□□□ 1.36
SSSCA1-207ENST00000533115 RTL8BQ17RB0 113 aa23.57■■□□□ 1.36
SSSCA1-207ENST00000533115 CROCCP3Q8IVE0 287 aa23.57■■□□□ 1.36
SSSCA1-207ENST00000533115 ADTRPQ96IZ2 230 aa23.57■■□□□ 1.36
SSSCA1-207ENST00000533115 OR2W1Q9Y3N9 320 aa23.57■■□□□ 1.36
SSSCA1-207ENST00000533115 I3L521 148 aa23.56■■□□□ 1.36
SSSCA1-207ENST00000533115 J3QRK9 145 aa23.56■■□□□ 1.36
SSSCA1-207ENST00000533115 RRASP10301 218 aa23.56■■□□□ 1.36
SSSCA1-207ENST00000533115 NFYAP23511 347 aaPredicted RBP23.56■■□□□ 1.36
SSSCA1-207ENST00000533115 LUMP51884 338 aaPredicted RBP23.56■■□□□ 1.36
SSSCA1-207ENST00000533115 FHL3Q13643 280 aa23.56■■□□□ 1.36
SSSCA1-207ENST00000533115 AKIRIN2Q53H80 203 aa23.56■■□□□ 1.36
SSSCA1-207ENST00000533115 TMEM177Q53S58 311 aa23.56■■□□□ 1.36
SSSCA1-207ENST00000533115 OR11H1Q8NG94 326 aa23.56■■□□□ 1.36
SSSCA1-207ENST00000533115 OR5M8Q8NGP6 311 aa23.56■■□□□ 1.36
SSSCA1-207ENST00000533115 HARBI1Q96MB7 349 aa23.56■■□□□ 1.36
SSSCA1-207ENST00000533115 HLA-DQB1P01920 261 aa23.55■■□□□ 1.36
SSSCA1-207ENST00000533115 RUNX1Q01196 453 aa23.55■■□□□ 1.36
SSSCA1-207ENST00000533115 UNQ5815/PRO19632Q6UWF5 114 aa23.55■■□□□ 1.36
SSSCA1-207ENST00000533115 ZNF645Q8N7E2 425 aa23.55■■□□□ 1.36
SSSCA1-207ENST00000533115 DDB2Q92466 427 aa23.55■■□□□ 1.36
SSSCA1-207ENST00000533115 ARPC1AQ92747 370 aa23.55■■□□□ 1.36
SSSCA1-207ENST00000533115 DIABLOQ9NR28 239 aa23.55■■□□□ 1.36
SSSCA1-207ENST00000533115 SHOXO15266 292 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms