RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 IGHV3-72A0A0B4J1Y9 119 aa9.02□□□□□ -0.97
TRAPPC4-211ENST00000533012 IGKV1D-13A0A0B4J2D9 117 aa9.02□□□□□ -0.97
TRAPPC4-211ENST00000533012 LINC00854A0A1B0GVQ3 168 aa9.02□□□□□ -0.97
TRAPPC4-211ENST00000533012 ANKRD20A5PA0PJZ0 165 aa9.02□□□□□ -0.97
TRAPPC4-211ENST00000533012 A6NDX4 124 aa9.02□□□□□ -0.97
TRAPPC4-211ENST00000533012 M0R1X1 148 aa9.02□□□□□ -0.97
TRAPPC4-211ENST00000533012 PLA2G10O15496 165 aa9.02□□□□□ -0.97
TRAPPC4-211ENST00000533012 GPR137BO60478 399 aa9.02□□□□□ -0.97
TRAPPC4-211ENST00000533012 PROP1O75360 226 aa9.02□□□□□ -0.97
TRAPPC4-211ENST00000533012 IGKV1D-33P01593 117 aa9.02□□□□□ -0.97
TRAPPC4-211ENST00000533012 IGKV1-33P01594 117 aa9.02□□□□□ -0.97
TRAPPC4-211ENST00000533012 CD74P04233 296 aa9.02□□□□□ -0.97
TRAPPC4-211ENST00000533012 SNRNP70P08621 437 aaKnown RBP9.02□□□□□ -0.97
TRAPPC4-211ENST00000533012 AKAIN1P0CW23 69 aa9.02□□□□□ -0.97
TRAPPC4-211ENST00000533012 CT45A6P0DMU7 189 aa9.02□□□□□ -0.97
TRAPPC4-211ENST00000533012 CT45A5P0DMU8 189 aa9.02□□□□□ -0.97
TRAPPC4-211ENST00000533012 CT45A7P0DMV0 189 aa9.02□□□□□ -0.97
TRAPPC4-211ENST00000533012 IGKV1-13P0DP09 117 aa9.02□□□□□ -0.97
TRAPPC4-211ENST00000533012 SLC6A1P30531 599 aa9.02□□□□□ -0.97
TRAPPC4-211ENST00000533012 MC5RP33032 325 aa9.02□□□□□ -0.97
TRAPPC4-211ENST00000533012 FXYD4P59646 89 aa9.02□□□□□ -0.97
TRAPPC4-211ENST00000533012 SRSF2Q01130 221 aaKnown RBP9.02□□□□□ -0.97
TRAPPC4-211ENST00000533012 HNF4GQ14541 408 aa9.02□□□□□ -0.97
TRAPPC4-211ENST00000533012 MEF2DQ14814 521 aa9.02□□□□□ -0.97
TRAPPC4-211ENST00000533012 ZNF660Q6AZW8 331 aaPredicted RBP9.02□□□□□ -0.97
TRAPPC4-211ENST00000533012 ARRDC1Q8N5I2 433 aa9.02□□□□□ -0.97
TRAPPC4-211ENST00000533012 OR2T10Q8NGZ9 312 aa9.02□□□□□ -0.97
TRAPPC4-211ENST00000533012 SECTM1Q8WVN6 248 aa9.02□□□□□ -0.97
TRAPPC4-211ENST00000533012 AKR1E2Q96JD6 320 aa9.02□□□□□ -0.97
TRAPPC4-211ENST00000533012 MARVELD1Q9BSK0 173 aa9.02□□□□□ -0.97
TRAPPC4-211ENST00000533012 MRPL20Q9BYC9 149 aaKnown RBP9.02□□□□□ -0.97
TRAPPC4-211ENST00000533012 TINAGL1Q9GZM7 467 aaPredicted RBP9.02□□□□□ -0.97
TRAPPC4-211ENST00000533012 SLC5A7Q9GZV3 580 aa9.02□□□□□ -0.97
TRAPPC4-211ENST00000533012 FAM181BA6NEQ2 426 aa9.01□□□□□ -0.97
TRAPPC4-211ENST00000533012 DISC1C4P0D8 188 aa9.01□□□□□ -0.97
TRAPPC4-211ENST00000533012 INMT-MINDY4F8WBC2 141 aa9.01□□□□□ -0.97
TRAPPC4-211ENST00000533012 PRAF2O60831 178 aa9.01□□□□□ -0.97
TRAPPC4-211ENST00000533012 SPNP16150 400 aa9.01□□□□□ -0.97
TRAPPC4-211ENST00000533012 TMEM11P17152 192 aa9.01□□□□□ -0.97
TRAPPC4-211ENST00000533012 THBS3P49746 956 aa9.01□□□□□ -0.97
TRAPPC4-211ENST00000533012 RPL15P61313 204 aaKnown RBP9.01□□□□□ -0.97
TRAPPC4-211ENST00000533012 TAGLNQ01995 201 aaKnown RBP9.01□□□□□ -0.97
TRAPPC4-211ENST00000533012 EBI3Q14213 229 aa9.01□□□□□ -0.97
TRAPPC4-211ENST00000533012 MSMO1Q15800 293 aa9.01□□□□□ -0.97
TRAPPC4-211ENST00000533012 LPCAT3Q6P1A2 487 aa9.01□□□□□ -0.97
TRAPPC4-211ENST00000533012 C16orf82Q7Z2V1 217 aa9.01□□□□□ -0.97
TRAPPC4-211ENST00000533012 TMEM219Q86XT9 240 aa9.01□□□□□ -0.97
TRAPPC4-211ENST00000533012 ZBTB34Q8NCN2 500 aa9.01□□□□□ -0.97
TRAPPC4-211ENST00000533012 MOB3AQ96BX8 217 aa9.01□□□□□ -0.97
TRAPPC4-211ENST00000533012 ADTRPQ96IZ2 230 aa9.01□□□□□ -0.97
TRAPPC4-211ENST00000533012 EAF1Q96JC9 268 aaPredicted RBP9.01□□□□□ -0.97
TRAPPC4-211ENST00000533012 CCL28Q9NRJ3 127 aa9.01□□□□□ -0.97
TRAPPC4-211ENST00000533012 OR5H14A6NHG9 310 aa9□□□□□ -0.97
TRAPPC4-211ENST00000533012 BOLA2-SMG1P6H3BVE0 249 aa9□□□□□ -0.97
TRAPPC4-211ENST00000533012 H7C2Y5 167 aa9□□□□□ -0.97
TRAPPC4-211ENST00000533012 MOSP00540 346 aa9□□□□□ -0.97
TRAPPC4-211ENST00000533012 AMY2AP04746 511 aa9□□□□□ -0.97
TRAPPC4-211ENST00000533012 DHRS7BQ6IAN0 325 aaPredicted RBP9□□□□□ -0.97
TRAPPC4-211ENST00000533012 GLDNQ6ZMI3 551 aaPredicted RBP9□□□□□ -0.97
TRAPPC4-211ENST00000533012 ZNF383Q8NA42 475 aa9□□□□□ -0.97
TRAPPC4-211ENST00000533012 OR4D10Q8NGI6 311 aa9□□□□□ -0.97
TRAPPC4-211ENST00000533012 OR5AN1Q8NGI8 311 aa9□□□□□ -0.97
TRAPPC4-211ENST00000533012 TERB2Q8NHR7 220 aa9□□□□□ -0.97
TRAPPC4-211ENST00000533012 TMEM158Q8WZ71 300 aa9□□□□□ -0.97
TRAPPC4-211ENST00000533012 RBM14Q96PK6 669 aaKnown RBP9□□□□□ -0.97
TRAPPC4-211ENST00000533012 HSD17B10Q99714 261 aaKnown RBP9□□□□□ -0.97
TRAPPC4-211ENST00000533012 SLC25A33Q9BSK2 321 aa9□□□□□ -0.97
TRAPPC4-211ENST00000533012 PAIP2BQ9ULR5 123 aaKnown RBP9□□□□□ -0.97
TRAPPC4-211ENST00000533012 WASHC3Q9Y3C0 194 aa9□□□□□ -0.97
TRAPPC4-211ENST00000533012 H0YJW9 148 aa8.99□□□□□ -0.97
TRAPPC4-211ENST00000533012 M0QZK8 103 aa8.99□□□□□ -0.97
TRAPPC4-211ENST00000533012 OR2F2O95006 317 aa8.99□□□□□ -0.97
TRAPPC4-211ENST00000533012 IGLV2-14P01704 120 aa8.99□□□□□ -0.97
TRAPPC4-211ENST00000533012 APOA2P02652 100 aa8.99□□□□□ -0.97
TRAPPC4-211ENST00000533012 RRASP10301 218 aa8.99□□□□□ -0.97
TRAPPC4-211ENST00000533012 S100GP29377 79 aa8.99□□□□□ -0.97
TRAPPC4-211ENST00000533012 GNRHRP30968 328 aa8.99□□□□□ -0.97
TRAPPC4-211ENST00000533012 DUTP33316 252 aaKnown RBP8.99□□□□□ -0.97
TRAPPC4-211ENST00000533012 UCP3P55916 312 aa8.99□□□□□ -0.97
TRAPPC4-211ENST00000533012 LINC00205P59089 165 aa8.99□□□□□ -0.97
TRAPPC4-211ENST00000533012 CBX3Q13185 183 aa8.99□□□□□ -0.97
TRAPPC4-211ENST00000533012 TATDN3Q17R31 274 aa8.99□□□□□ -0.97
TRAPPC4-211ENST00000533012 SCGB2B2Q4G0G5 96 aa8.99□□□□□ -0.97
TRAPPC4-211ENST00000533012 ZNF66Q6ZN08 573 aa8.99□□□□□ -0.97
TRAPPC4-211ENST00000533012 CMTM1Q8IZ96 169 aa8.99□□□□□ -0.97
TRAPPC4-211ENST00000533012 OR8H1Q8NGG4 311 aa8.99□□□□□ -0.97
TRAPPC4-211ENST00000533012 OR4C16Q8NGL9 310 aa8.99□□□□□ -0.97
TRAPPC4-211ENST00000533012 C5orf30Q96GV9 206 aa8.99□□□□□ -0.97
TRAPPC4-211ENST00000533012 RNF5Q99942 180 aa8.99□□□□□ -0.97
TRAPPC4-211ENST00000533012 PRRT1Q99946 306 aa8.99□□□□□ -0.97
TRAPPC4-211ENST00000533012 NPFFR1Q9GZQ6 430 aa8.99□□□□□ -0.97
TRAPPC4-211ENST00000533012 SLC35D1Q9NTN3 355 aa8.99□□□□□ -0.97
TRAPPC4-211ENST00000533012 MCUBQ9NWR8 336 aa8.99□□□□□ -0.97
TRAPPC4-211ENST00000533012 C1RLQ9NZP8 487 aa8.99□□□□□ -0.97
TRAPPC4-211ENST00000533012 PRELID3BQ9Y3B1 194 aa8.99□□□□□ -0.97
TRAPPC4-211ENST00000533012 NCBP2LA6PVI3 153 aaKnown RBP8.98□□□□□ -0.97
TRAPPC4-211ENST00000533012 TNFSF12O43508 249 aa8.98□□□□□ -0.97
TRAPPC4-211ENST00000533012 CHST1O43916 411 aa8.98□□□□□ -0.97
TRAPPC4-211ENST00000533012 SNAPC5O75971 98 aa8.98□□□□□ -0.97
TRAPPC4-211ENST00000533012 TCRBP04435 133 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms