RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 LAIR2Q6ISS4 152 aa12.11□□□□□ -0.47
CHMP4A-204ENST00000530996 LCN12Q6JVE5 192 aa12.11□□□□□ -0.47
CHMP4A-204ENST00000530996 ADAMTSL5Q6ZMM2 481 aa12.11□□□□□ -0.47
CHMP4A-204ENST00000530996 OR9G4Q8NGQ1 327 aa12.11□□□□□ -0.47
CHMP4A-204ENST00000530996 UFD1Q92890 307 aa12.11□□□□□ -0.47
CHMP4A-204ENST00000530996 TMEM203Q969S6 136 aa12.11□□□□□ -0.47
CHMP4A-204ENST00000530996 VCXQ9H320 206 aa12.11□□□□□ -0.47
CHMP4A-204ENST00000530996 Q9N2K0 584 aa12.11□□□□□ -0.47
CHMP4A-204ENST00000530996 PLCXD1Q9NUJ7 323 aa12.11□□□□□ -0.47
CHMP4A-204ENST00000530996 RDH8Q9NYR8 311 aa12.11□□□□□ -0.47
CHMP4A-204ENST00000530996 SORL1Q92673 2214 aa12.11□□□□□ -0.47
CHMP4A-204ENST00000530996 PTGES3LE9PB15 166 aa12.1□□□□□ -0.47
CHMP4A-204ENST00000530996 BET1O15155 118 aa12.1□□□□□ -0.47
CHMP4A-204ENST00000530996 CDK1P06493 297 aa12.1□□□□□ -0.47
CHMP4A-204ENST00000530996 UCHL1P09936 223 aa12.1□□□□□ -0.47
CHMP4A-204ENST00000530996 APELAP0DMC3 54 aa12.1□□□□□ -0.47
CHMP4A-204ENST00000530996 QRFPP83859 136 aa12.1□□□□□ -0.47
CHMP4A-204ENST00000530996 SPHARQ15513 63 aa12.1□□□□□ -0.47
CHMP4A-204ENST00000530996 RPEL1Q2QD12 228 aa12.1□□□□□ -0.47
CHMP4A-204ENST00000530996 MOGAT2Q3SYC2 334 aa12.1□□□□□ -0.47
CHMP4A-204ENST00000530996 LIPKQ5VXJ0 399 aa12.1□□□□□ -0.47
CHMP4A-204ENST00000530996 ARHGAP5-AS1Q96IT6 56 aa12.1□□□□□ -0.47
CHMP4A-204ENST00000530996 PECRQ9BY49 303 aa12.1□□□□□ -0.47
CHMP4A-204ENST00000530996 RBM7Q9Y580 266 aaKnown RBP12.1□□□□□ -0.47
CHMP4A-204ENST00000530996 DNAH7Q8WXX0 4024 aa12.1□□□□□ -0.47
CHMP4A-204ENST00000530996 TRDCB7Z8K6 153 aa12.09□□□□□ -0.47
CHMP4A-204ENST00000530996 SLC17A2O00624 439 aa12.09□□□□□ -0.47
CHMP4A-204ENST00000530996 SHOXO15266 292 aa12.09□□□□□ -0.47
CHMP4A-204ENST00000530996 MPPED1O15442 326 aa12.09□□□□□ -0.47
CHMP4A-204ENST00000530996 IFNA6P05013 189 aa12.09□□□□□ -0.47
CHMP4A-204ENST00000530996 HSMCR30P0CW71 290 aa12.09□□□□□ -0.47
CHMP4A-204ENST00000530996 AADACP22760 399 aa12.09□□□□□ -0.47
CHMP4A-204ENST00000530996 PJVKQ0ZLH3 352 aa12.09□□□□□ -0.47
CHMP4A-204ENST00000530996 TATDN3Q17R31 274 aa12.09□□□□□ -0.47
CHMP4A-204ENST00000530996 RTL8BQ17RB0 113 aa12.09□□□□□ -0.47
CHMP4A-204ENST00000530996 Q8N1Y9 231 aa12.09□□□□□ -0.47
CHMP4A-204ENST00000530996 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.09□□□□□ -0.47
CHMP4A-204ENST00000530996 BVESQ8NE79 360 aa12.09□□□□□ -0.47
CHMP4A-204ENST00000530996 OR56B1Q8NGI3 324 aa12.09□□□□□ -0.47
CHMP4A-204ENST00000530996 PTX4Q96A99 478 aa12.09□□□□□ -0.47
CHMP4A-204ENST00000530996 C19orf73Q9NVV2 129 aa12.09□□□□□ -0.47
CHMP4A-204ENST00000530996 FKBP14Q9NWM8 211 aa12.09□□□□□ -0.47
CHMP4A-204ENST00000530996 HSF4Q9ULV5 492 aa12.09□□□□□ -0.47
CHMP4A-204ENST00000530996 A0A0B4J203 849 aa12.08□□□□□ -0.48
CHMP4A-204ENST00000530996 IGKV1-6A0A0C4DH72 117 aa12.08□□□□□ -0.48
CHMP4A-204ENST00000530996 CD3GP09693 182 aa12.08□□□□□ -0.48
CHMP4A-204ENST00000530996 SERPINB10P48595 397 aa12.08□□□□□ -0.48
CHMP4A-204ENST00000530996 CLDN12P56749 244 aa12.08□□□□□ -0.48
CHMP4A-204ENST00000530996 KLF5Q13887 457 aaPredicted RBP12.08□□□□□ -0.48
CHMP4A-204ENST00000530996 OR4A4PQ8NGN8 299 aa12.08□□□□□ -0.48
CHMP4A-204ENST00000530996 FBLIM1Q8WUP2 373 aa12.08□□□□□ -0.48
CHMP4A-204ENST00000530996 EDA2RQ9HAV5 297 aa12.08□□□□□ -0.48
CHMP4A-204ENST00000530996 SCN3BQ9NY72 215 aa12.08□□□□□ -0.48
CHMP4A-204ENST00000530996 PEF1Q9UBV8 284 aaKnown RBP12.08□□□□□ -0.48
CHMP4A-204ENST00000530996 AK6Q9Y3D8 172 aaKnown RBP12.08□□□□□ -0.48
CHMP4A-204ENST00000530996 DYNC2H1Q8NCM8 4307 aaKnown RBP12.07□□□□□ -0.48
CHMP4A-204ENST00000530996 A8MZ25 164 aa12.07□□□□□ -0.48
CHMP4A-204ENST00000530996 FABP7O15540 132 aa12.07□□□□□ -0.48
CHMP4A-204ENST00000530996 PROP1O75360 226 aa12.07□□□□□ -0.48
CHMP4A-204ENST00000530996 ARL6IP5O75915 188 aa12.07□□□□□ -0.48
CHMP4A-204ENST00000530996 IGLV2-23P01705 113 aa12.07□□□□□ -0.48
CHMP4A-204ENST00000530996 TRBV12-3P01733 135 aa12.07□□□□□ -0.48
CHMP4A-204ENST00000530996 RPS25P62851 125 aaKnown RBP12.07□□□□□ -0.48
CHMP4A-204ENST00000530996 TNXAQ16473 311 aa12.07□□□□□ -0.48
CHMP4A-204ENST00000530996 HAGHQ16775 308 aa12.07□□□□□ -0.48
CHMP4A-204ENST00000530996 VMA21Q3ZAQ7 101 aa12.07□□□□□ -0.48
CHMP4A-204ENST00000530996 Q8N402 240 aa12.07□□□□□ -0.48
CHMP4A-204ENST00000530996 OR10J5Q8NHC4 309 aa12.07□□□□□ -0.48
CHMP4A-204ENST00000530996 TMEM68Q96MH6 324 aa12.07□□□□□ -0.48
CHMP4A-204ENST00000530996 GINS4Q9BRT9 223 aa12.07□□□□□ -0.48
CHMP4A-204ENST00000530996 TINAGL1Q9GZM7 467 aaPredicted RBP12.07□□□□□ -0.48
CHMP4A-204ENST00000530996 ADAM30Q9UKF2 790 aa12.07□□□□□ -0.48
CHMP4A-204ENST00000530996 LSM2Q9Y333 95 aaKnown RBP12.07□□□□□ -0.48
CHMP4A-204ENST00000530996 A0A075B6Q4 140 aa12.06□□□□□ -0.48
CHMP4A-204ENST00000530996 JTBO76095 146 aa12.06□□□□□ -0.48
CHMP4A-204ENST00000530996 CALRP27797 417 aaKnown RBP12.06□□□□□ -0.48
CHMP4A-204ENST00000530996 SSBP2P81877 361 aaPredicted RBP12.06□□□□□ -0.48
CHMP4A-204ENST00000530996 EXOSC2Q13868 293 aaKnown RBP12.06□□□□□ -0.48
CHMP4A-204ENST00000530996 FAM89BQ8N5H3 189 aa12.06□□□□□ -0.48
CHMP4A-204ENST00000530996 ACOT12Q8WYK0 555 aa12.06□□□□□ -0.48
CHMP4A-204ENST00000530996 MAFIPQ8WZ33 124 aa12.06□□□□□ -0.48
CHMP4A-204ENST00000530996 FAM3DQ96BQ1 224 aa12.06□□□□□ -0.48
CHMP4A-204ENST00000530996 GFI1Q99684 422 aa12.06□□□□□ -0.48
CHMP4A-204ENST00000530996 PLEKHA3Q9HB20 300 aa12.06□□□□□ -0.48
CHMP4A-204ENST00000530996 RETNQ9HD89 108 aa12.06□□□□□ -0.48
CHMP4A-204ENST00000530996 SDHAF2Q9NX18 166 aa12.06□□□□□ -0.48
CHMP4A-204ENST00000530996 PEMTQ9UBM1 199 aa12.06□□□□□ -0.48
CHMP4A-204ENST00000530996 DENRO43583 198 aaKnown RBP12.05□□□□□ -0.48
CHMP4A-204ENST00000530996 OR2A4O95047 310 aa12.05□□□□□ -0.48
CHMP4A-204ENST00000530996 FCGR3AP08637 254 aa12.05□□□□□ -0.48
CHMP4A-204ENST00000530996 TMEM50BP56557 158 aa12.05□□□□□ -0.48
CHMP4A-204ENST00000530996 CD81P60033 236 aa12.05□□□□□ -0.48
CHMP4A-204ENST00000530996 DYRK1AQ13627 763 aa12.05□□□□□ -0.48
CHMP4A-204ENST00000530996 IGSF11Q5DX21 431 aa12.05□□□□□ -0.48
CHMP4A-204ENST00000530996 PLAC9Q5JTB6 97 aa12.05□□□□□ -0.48
CHMP4A-204ENST00000530996 HES5Q5TA89 166 aa12.05□□□□□ -0.48
CHMP4A-204ENST00000530996 OGFRL1Q5TC84 451 aaPredicted RBP12.05□□□□□ -0.48
CHMP4A-204ENST00000530996 RNLSQ5VYX0 342 aa12.05□□□□□ -0.48
CHMP4A-204ENST00000530996 ZNF343Q6P1L6 599 aa12.05□□□□□ -0.48
CHMP4A-204ENST00000530996 IDO2Q6ZQW0 420 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms