RNA–Protein interactions for RNA: ENST00000530983.5

VPS28-213, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 2,337 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-213ENST00000530983 SMIM7Q9BQ49 75 aa16.14■□□□□ 0.17
VPS28-213ENST00000530983 CTDSP1Q9GZU7 261 aa16.14■□□□□ 0.17
VPS28-213ENST00000530983 SLC25A22Q9H936 323 aa16.14■□□□□ 0.17
VPS28-213ENST00000530983 NAT8Q9UHE5 227 aa16.14■□□□□ 0.17
VPS28-213ENST00000530983 NCOR1O75376 2440 aa16.13■□□□□ 0.17
VPS28-213ENST00000530983 C17orf98A8MV24 154 aa16.13■□□□□ 0.17
VPS28-213ENST00000530983 MLNRO43193 412 aa16.13■□□□□ 0.17
VPS28-213ENST00000530983 HBZP02008 142 aa16.13■□□□□ 0.17
VPS28-213ENST00000530983 CD59P13987 128 aa16.13■□□□□ 0.17
VPS28-213ENST00000530983 TLE1Q04724 770 aa16.13■□□□□ 0.17
VPS28-213ENST00000530983 LBHQ53QV2 105 aaPredicted RBP16.13■□□□□ 0.17
VPS28-213ENST00000530983 Q6ZR03 302 aa16.13■□□□□ 0.17
VPS28-213ENST00000530983 CYP2G1PQ6ZSU1 146 aa16.13■□□□□ 0.17
VPS28-213ENST00000530983 C11orf53Q8IXP5 236 aa16.13■□□□□ 0.17
VPS28-213ENST00000530983 OOEPA6NGQ2 149 aa16.13■□□□□ 0.17
VPS28-213ENST00000530983 TFF1P04155 84 aa16.13■□□□□ 0.17
VPS28-213ENST00000530983 SLC35E4Q6ICL7 350 aa16.13■□□□□ 0.17
VPS28-213ENST00000530983 KLF14Q8TD94 323 aaPredicted RBP16.13■□□□□ 0.17
VPS28-213ENST00000530983 COQ2Q96H96 371 aa16.13■□□□□ 0.17
VPS28-213ENST00000530983 TMEM147Q9BVK8 224 aa16.13■□□□□ 0.17
VPS28-213ENST00000530983 ZDHHC11Q9H8X9 412 aa16.13■□□□□ 0.17
VPS28-213ENST00000530983 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.13■□□□□ 0.17
VPS28-213ENST00000530983 PITPNC1Q9UKF7 332 aa16.13■□□□□ 0.17
VPS28-213ENST00000530983 ZG16O60844 167 aa16.12■□□□□ 0.17
VPS28-213ENST00000530983 TGFBR3Q03167 851 aa16.12■□□□□ 0.17
VPS28-213ENST00000530983 ADIRFQ15847 76 aa16.12■□□□□ 0.17
VPS28-213ENST00000530983 NCR3LG1Q68D85 454 aa16.12■□□□□ 0.17
VPS28-213ENST00000530983 BTNL3Q6UXE8 466 aa16.12■□□□□ 0.17
VPS28-213ENST00000530983 GCNT2Q8N0V5 402 aa16.12■□□□□ 0.17
VPS28-213ENST00000530983 ZDHHC16Q969W1 377 aa16.12■□□□□ 0.17
VPS28-213ENST00000530983 OBP2BQ9NPH6 170 aa16.12■□□□□ 0.17
VPS28-213ENST00000530983 A8MWP6 167 aa16.12■□□□□ 0.17
VPS28-213ENST00000530983 KBTBD11O94819 623 aa16.12■□□□□ 0.17
VPS28-213ENST00000530983 GZMBP10144 247 aa16.12■□□□□ 0.17
VPS28-213ENST00000530983 SPCS3P61009 180 aa16.12■□□□□ 0.17
VPS28-213ENST00000530983 CATR1Q13166 79 aa16.12■□□□□ 0.17
VPS28-213ENST00000530983 JOSD1Q15040 202 aaPredicted RBP16.12■□□□□ 0.17
VPS28-213ENST00000530983 ATP6V1FQ16864 119 aa16.12■□□□□ 0.17
VPS28-213ENST00000530983 DTD1Q8TEA8 209 aa16.12■□□□□ 0.17
VPS28-213ENST00000530983 LOXL4Q96JB6 756 aa16.12■□□□□ 0.17
VPS28-213ENST00000530983 CTXND1A0A1B0GTU2 59 aa16.11■□□□□ 0.17
VPS28-213ENST00000530983 SNRPCP09234 159 aaKnown RBP16.11■□□□□ 0.17
VPS28-213ENST00000530983 TFF3Q07654 80 aa16.11■□□□□ 0.17
VPS28-213ENST00000530983 TMEM241Q24JQ0 296 aa16.11■□□□□ 0.17
VPS28-213ENST00000530983 MRGPRDQ8TDS7 321 aa16.11■□□□□ 0.17
VPS28-213ENST00000530983 LURAP1Q96LR2 239 aa16.11■□□□□ 0.17
VPS28-213ENST00000530983 PTPRBP23467 1997 aa16.11■□□□□ 0.17
VPS28-213ENST00000530983 TNFSF15O95150 251 aa16.11■□□□□ 0.17
VPS28-213ENST00000530983 SP9P0CG40 484 aa16.11■□□□□ 0.17
VPS28-213ENST00000530983 FGF7P21781 194 aa16.11■□□□□ 0.17
VPS28-213ENST00000530983 OR10G9Q8NGN4 311 aa16.11■□□□□ 0.17
VPS28-213ENST00000530983 OR10G7Q8NGN6 311 aa16.11■□□□□ 0.17
VPS28-213ENST00000530983 GATAD1Q8WUU5 269 aa16.11■□□□□ 0.17
VPS28-213ENST00000530983 RPUSD4Q96CM3 377 aaKnown RBP16.11■□□□□ 0.17
VPS28-213ENST00000530983 MRPL37Q9BZE1 423 aaKnown RBP16.11■□□□□ 0.17
VPS28-213ENST00000530983 CLDN14O95500 239 aa16.1■□□□□ 0.17
VPS28-213ENST00000530983 AMBPP02760 352 aa16.1■□□□□ 0.17
VPS28-213ENST00000530983 GABRA2P47869 451 aa16.1■□□□□ 0.17
VPS28-213ENST00000530983 PSMB3P49720 205 aa16.1■□□□□ 0.17
VPS28-213ENST00000530983 RPS16P62249 146 aaKnown RBP16.1■□□□□ 0.17
VPS28-213ENST00000530983 ARG2P78540 354 aa16.1■□□□□ 0.17
VPS28-213ENST00000530983 PMP22Q01453 160 aa16.1■□□□□ 0.17
VPS28-213ENST00000530983 TMPRSS7Q7RTY8 843 aa16.1■□□□□ 0.17
VPS28-213ENST00000530983 C16orf82Q7Z2V1 217 aa16.1■□□□□ 0.17
VPS28-213ENST00000530983 TGIF2LXQ8IUE1 241 aa16.1■□□□□ 0.17
VPS28-213ENST00000530983 TMEM183AQ8IXX5 376 aa16.1■□□□□ 0.17
VPS28-213ENST00000530983 ZNF664Q8N3J9 261 aa16.1■□□□□ 0.17
VPS28-213ENST00000530983 OR10P1Q8NGE3 313 aa16.1■□□□□ 0.17
VPS28-213ENST00000530983 OR4X1Q8NH49 305 aa16.1■□□□□ 0.17
VPS28-213ENST00000530983 NINJ1Q92982 152 aa16.1■□□□□ 0.17
VPS28-213ENST00000530983 TP53TG5Q9Y2B4 290 aa16.1■□□□□ 0.17
VPS28-213ENST00000530983 LOC400499M0QZD8 3231 aa16.1■□□□□ 0.17
VPS28-213ENST00000530983 PRR14LQ5THK1 2151 aa16.1■□□□□ 0.17
VPS28-213ENST00000530983 TMEM250H0YL14 139 aa16.1■□□□□ 0.17
VPS28-213ENST00000530983 DVL1O14640 695 aa16.1■□□□□ 0.17
VPS28-213ENST00000530983 PFN1P07737 140 aaKnown RBP16.1■□□□□ 0.17
VPS28-213ENST00000530983 SSTR5P35346 364 aa16.1■□□□□ 0.17
VPS28-213ENST00000530983 LINC00205P59089 165 aa16.1■□□□□ 0.17
VPS28-213ENST00000530983 RPL23P62829 140 aaKnown RBP16.1■□□□□ 0.17
VPS28-213ENST00000530983 DHRS13Q6UX07 377 aa16.1■□□□□ 0.17
VPS28-213ENST00000530983 ACP7Q6ZNF0 438 aa16.1■□□□□ 0.17
VPS28-213ENST00000530983 OR10A7Q8NGE5 316 aa16.1■□□□□ 0.17
VPS28-213ENST00000530983 NPCDR1Q9BY65 106 aa16.1■□□□□ 0.17
VPS28-213ENST00000530983 SPENQ96T58 3664 aaKnown RBP16.09■□□□□ 0.17
VPS28-213ENST00000530983 LINC00473A8K010 186 aa16.09■□□□□ 0.17
VPS28-213ENST00000530983 MBP02144 154 aa16.09■□□□□ 0.17
VPS28-213ENST00000530983 BSXQ3C1V8 233 aa16.09■□□□□ 0.17
VPS28-213ENST00000530983 FFAR4Q5NUL3 377 aa16.09■□□□□ 0.17
VPS28-213ENST00000530983 INO80CQ6PI98 192 aaPredicted RBP16.09■□□□□ 0.17
VPS28-213ENST00000530983 TPRX1Q8N7U7 411 aa16.09■□□□□ 0.17
VPS28-213ENST00000530983 NEU1Q99519 415 aa16.09■□□□□ 0.17
VPS28-213ENST00000530983 PARLQ9H300 379 aa16.09■□□□□ 0.17
VPS28-213ENST00000530983 METRNQ9UJH8 293 aa16.09■□□□□ 0.17
VPS28-213ENST00000530983 RAB29O14966 203 aa16.08■□□□□ 0.17
VPS28-213ENST00000530983 VWC2Q2TAL6 325 aa16.08■□□□□ 0.17
VPS28-213ENST00000530983 SPINK9Q5DT21 86 aa16.08■□□□□ 0.17
VPS28-213ENST00000530983 PLA2G2CQ5R387 149 aa16.08■□□□□ 0.17
VPS28-213ENST00000530983 PRAMEF6Q5VXH4 476 aa16.08■□□□□ 0.17
VPS28-213ENST00000530983 RNASEH2CQ8TDP1 164 aaKnown RBP16.08■□□□□ 0.17
VPS28-213ENST00000530983 PYGO2Q9BRQ0 406 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms