RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 UBE2CO00762 179 aa14.33□□□□□ -0.12
BRCA2-204ENST00000530893 ST8SIA5O15466 376 aa14.33□□□□□ -0.12
BRCA2-204ENST00000530893 CRYABP02511 175 aaKnown RBP14.33□□□□□ -0.12
BRCA2-204ENST00000530893 EGR1P18146 543 aa14.33□□□□□ -0.12
BRCA2-204ENST00000530893 GPR12P47775 334 aa14.33□□□□□ -0.12
BRCA2-204ENST00000530893 SNRPEP62304 92 aaKnown RBP14.33□□□□□ -0.12
BRCA2-204ENST00000530893 NKX6-1P78426 367 aaPredicted RBP14.33□□□□□ -0.12
BRCA2-204ENST00000530893 EDDM3AQ14507 147 aa14.33□□□□□ -0.12
BRCA2-204ENST00000530893 VWC2Q2TAL6 325 aa14.33□□□□□ -0.12
BRCA2-204ENST00000530893 C1orf185Q5T7R7 199 aa14.33□□□□□ -0.12
BRCA2-204ENST00000530893 ZNF474Q6S9Z5 364 aaPredicted RBP14.33□□□□□ -0.12
BRCA2-204ENST00000530893 HEPN1Q6WQI6 88 aa14.33□□□□□ -0.12
BRCA2-204ENST00000530893 ZNF665Q9H7R5 613 aa14.33□□□□□ -0.12
BRCA2-204ENST00000530893 CLN8Q9UBY8 286 aa14.33□□□□□ -0.12
BRCA2-204ENST00000530893 FAM215AQ9Y5M1 114 aa14.33□□□□□ -0.12
BRCA2-204ENST00000530893 CACNA1DQ01668 2161 aa14.32□□□□□ -0.12
BRCA2-204ENST00000530893 IGLV3-9A0A075B6K5 115 aa14.32□□□□□ -0.12
BRCA2-204ENST00000530893 IGHV3-43A0A0B4J1X8 118 aa14.32□□□□□ -0.12
BRCA2-204ENST00000530893 hCG_1809904A0A1W2PP81 198 aa14.32□□□□□ -0.12
BRCA2-204ENST00000530893 A0A1W2PR64 198 aa14.32□□□□□ -0.12
BRCA2-204ENST00000530893 A0A1W2PRV1 198 aa14.32□□□□□ -0.12
BRCA2-204ENST00000530893 MAP1LC3B2A6NCE7 125 aa14.32□□□□□ -0.12
BRCA2-204ENST00000530893 ZFP92A6NM28 416 aa14.32□□□□□ -0.12
BRCA2-204ENST00000530893 M0R1B8 84 aa14.32□□□□□ -0.12
BRCA2-204ENST00000530893 F2RL2O00254 374 aa14.32□□□□□ -0.12
BRCA2-204ENST00000530893 RBFOX2O43251 390 aaKnown RBP eCLIP14.32□□□□□ -0.12
BRCA2-204ENST00000530893 NDUFS6O75380 124 aaKnown RBP14.32□□□□□ -0.12
BRCA2-204ENST00000530893 HPRT1P00492 218 aa14.32□□□□□ -0.12
BRCA2-204ENST00000530893 LHBP01229 141 aa14.32□□□□□ -0.12
BRCA2-204ENST00000530893 IFNA17P01571 189 aa14.32□□□□□ -0.12
BRCA2-204ENST00000530893 FBP1P09467 338 aa14.32□□□□□ -0.12
BRCA2-204ENST00000530893 IGHV3-43DP0DP04 118 aa14.32□□□□□ -0.12
BRCA2-204ENST00000530893 DUTP33316 252 aaKnown RBP14.32□□□□□ -0.12
BRCA2-204ENST00000530893 GNB2P62879 340 aa14.32□□□□□ -0.12
BRCA2-204ENST00000530893 MORN2Q502X0 79 aa14.32□□□□□ -0.12
BRCA2-204ENST00000530893 RBMS3Q6XE24 437 aaKnown RBP14.32□□□□□ -0.12
BRCA2-204ENST00000530893 MEGF10Q96KG7 1140 aa14.32□□□□□ -0.12
BRCA2-204ENST00000530893 OR2V2Q96R30 315 aa14.32□□□□□ -0.12
BRCA2-204ENST00000530893 SFXN3Q9BWM7 321 aa14.32□□□□□ -0.12
BRCA2-204ENST00000530893 MAP1LC3BQ9GZQ8 125 aa14.32□□□□□ -0.12
BRCA2-204ENST00000530893 GNG12Q9UBI6 72 aa14.32□□□□□ -0.12
BRCA2-204ENST00000530893 ZNF318Q5VUA4 2279 aa14.32□□□□□ -0.12
BRCA2-204ENST00000530893 ITGB1BP1O14713 200 aa14.32□□□□□ -0.12
BRCA2-204ENST00000530893 ZG16O60844 167 aa14.32□□□□□ -0.12
BRCA2-204ENST00000530893 MSMPQ1L6U9 139 aa14.32□□□□□ -0.12
BRCA2-204ENST00000530893 FAM90A2PQ658T7 463 aa14.32□□□□□ -0.12
BRCA2-204ENST00000530893 ADAM5Q6NVV9 412 aa14.32□□□□□ -0.12
BRCA2-204ENST00000530893 LRP11Q86VZ4 500 aa14.32□□□□□ -0.12
BRCA2-204ENST00000530893 COL25A1Q9BXS0 654 aaPredicted RBP14.32□□□□□ -0.12
BRCA2-204ENST00000530893 SLC39A9Q9NUM3 307 aa14.32□□□□□ -0.12
BRCA2-204ENST00000530893 TMEM242Q9NWH2 141 aa14.32□□□□□ -0.12
BRCA2-204ENST00000530893 OR6C3Q9NZP0 311 aa14.32□□□□□ -0.12
BRCA2-204ENST00000530893 PRRC2CQ9Y520 2896 aaKnown RBP14.32□□□□□ -0.12
BRCA2-204ENST00000530893 LOC400499M0QZD8 3231 aa14.32□□□□□ -0.12
BRCA2-204ENST00000530893 TTC28Q96AY4 2481 aa14.31□□□□□ -0.12
BRCA2-204ENST00000530893 RBMXL2O75526 392 aaKnown RBP14.31□□□□□ -0.12
BRCA2-204ENST00000530893 S100A8P05109 93 aa14.31□□□□□ -0.12
BRCA2-204ENST00000530893 GATA4P43694 442 aa14.31□□□□□ -0.12
BRCA2-204ENST00000530893 RAB11AP62491 216 aa14.31□□□□□ -0.12
BRCA2-204ENST00000530893 CA5BP1Q8WTZ4 195 aa14.31□□□□□ -0.12
BRCA2-204ENST00000530893 R3HDM4Q96D70 268 aa14.31□□□□□ -0.12
BRCA2-204ENST00000530893 METTL1Q9UBP6 276 aaKnown RBP14.31□□□□□ -0.12
BRCA2-204ENST00000530893 GAB2Q9UQC2 676 aa14.31□□□□□ -0.12
BRCA2-204ENST00000530893 CEBPZOSA8MTT3 80 aa14.31□□□□□ -0.12
BRCA2-204ENST00000530893 DEFB108AA8MXU0 73 aa14.31□□□□□ -0.12
BRCA2-204ENST00000530893 SOX15O60248 233 aa14.31□□□□□ -0.12
BRCA2-204ENST00000530893 ELLP55199 621 aaPredicted RBP14.31□□□□□ -0.12
BRCA2-204ENST00000530893 SSX7Q7RTT5 188 aa14.31□□□□□ -0.12
BRCA2-204ENST00000530893 RPP25LQ8N5L8 163 aaKnown RBP14.31□□□□□ -0.12
BRCA2-204ENST00000530893 LHX4Q969G2 390 aa14.31□□□□□ -0.12
BRCA2-204ENST00000530893 C12orf57Q99622 126 aa14.31□□□□□ -0.12
BRCA2-204ENST00000530893 DCTN5Q9BTE1 182 aa14.31□□□□□ -0.12
BRCA2-204ENST00000530893 PRR14LQ5THK1 2151 aa14.3□□□□□ -0.12
BRCA2-204ENST00000530893 KIR2DS2P43631 304 aa14.3□□□□□ -0.12
BRCA2-204ENST00000530893 KRTCAP3Q53RY4 240 aa14.3□□□□□ -0.12
BRCA2-204ENST00000530893 NCR3LG1Q68D85 454 aa14.3□□□□□ -0.12
BRCA2-204ENST00000530893 OR52E5Q8NH55 327 aa14.3□□□□□ -0.12
BRCA2-204ENST00000530893 CTXND1A0A1B0GTU2 59 aa14.29□□□□□ -0.12
BRCA2-204ENST00000530893 C17orf112F2Z3M2 114 aa14.29□□□□□ -0.12
BRCA2-204ENST00000530893 MDKP21741 143 aaPredicted RBP14.29□□□□□ -0.12
BRCA2-204ENST00000530893 MEOX2P50222 304 aa14.29□□□□□ -0.12
BRCA2-204ENST00000530893 FGF8P55075 233 aaPredicted RBP14.29□□□□□ -0.12
BRCA2-204ENST00000530893 LOXL3P58215 753 aa14.29□□□□□ -0.12
BRCA2-204ENST00000530893 SELENOVP59797 346 aa14.29□□□□□ -0.12
BRCA2-204ENST00000530893 RPP30P78346 268 aaKnown RBP14.29□□□□□ -0.12
BRCA2-204ENST00000530893 PDLIM3Q53GG5 364 aaPredicted RBP14.29□□□□□ -0.12
BRCA2-204ENST00000530893 MOGAT3Q86VF5 341 aa14.29□□□□□ -0.12
BRCA2-204ENST00000530893 ZDHHC16Q969W1 377 aa14.29□□□□□ -0.12
BRCA2-204ENST00000530893 EP300Q09472 2414 aaPredicted RBP14.29□□□□□ -0.12
BRCA2-204ENST00000530893 PROP1O75360 226 aa14.29□□□□□ -0.12
BRCA2-204ENST00000530893 IGHV2-5P01817 119 aa14.29□□□□□ -0.12
BRCA2-204ENST00000530893 CD55P08174 381 aa14.29□□□□□ -0.12
BRCA2-204ENST00000530893 FGF7P21781 194 aa14.29□□□□□ -0.12
BRCA2-204ENST00000530893 CEACAM8P31997 349 aaPredicted RBP14.29□□□□□ -0.12
BRCA2-204ENST00000530893 RAB7AP51149 207 aa14.29□□□□□ -0.12
BRCA2-204ENST00000530893 ELOBQ15370 118 aa14.29□□□□□ -0.12
BRCA2-204ENST00000530893 ZNF709Q8N972 641 aa14.29□□□□□ -0.12
BRCA2-204ENST00000530893 FAM222BQ8WU58 562 aa14.29□□□□□ -0.12
BRCA2-204ENST00000530893 ZNF251Q9BRH9 671 aa14.29□□□□□ -0.12
BRCA2-204ENST00000530893 TCEAL7Q9BRU2 100 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms