RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 UNC119Q13432 240 aa13.28□□□□□ -0.28
PCDHA4-203ENST00000530339 TGIF1Q15583 401 aa13.28□□□□□ -0.28
PCDHA4-203ENST00000530339 IBA57Q5T440 356 aaKnown RBP13.28□□□□□ -0.28
PCDHA4-203ENST00000530339 TMEM183AQ8IXX5 376 aa13.28□□□□□ -0.28
PCDHA4-203ENST00000530339 MRPL18Q9H0U6 180 aaKnown RBP13.28□□□□□ -0.28
PCDHA4-203ENST00000530339 NDUFA2O43678 99 aa13.28□□□□□ -0.28
PCDHA4-203ENST00000530339 SLC35B1P78383 322 aa13.28□□□□□ -0.28
PCDHA4-203ENST00000530339 PAXXQ9BUH6 204 aa13.28□□□□□ -0.28
PCDHA4-203ENST00000530339 FSCN3Q9NQT6 498 aa13.28□□□□□ -0.28
PCDHA4-203ENST00000530339 TMEM250H0YL14 139 aa13.27□□□□□ -0.28
PCDHA4-203ENST00000530339 CALHM1Q8IU99 346 aa13.27□□□□□ -0.28
PCDHA4-203ENST00000530339 PARLQ9H300 379 aa13.27□□□□□ -0.28
PCDHA4-203ENST00000530339 SLC25A10Q9UBX3 287 aaPredicted RBP13.27□□□□□ -0.28
PCDHA4-203ENST00000530339 TMEM54Q969K7 222 aa13.27□□□□□ -0.28
PCDHA4-203ENST00000530339 PSMG3Q9BT73 122 aaPredicted RBP13.27□□□□□ -0.28
PCDHA4-203ENST00000530339 ASCL3Q9NQ33 180 aa13.27□□□□□ -0.28
PCDHA4-203ENST00000530339 ZDHHC8Q9ULC8 765 aa13.27□□□□□ -0.28
PCDHA4-203ENST00000530339 UNC13CQ8NB66 2214 aa13.27□□□□□ -0.28
PCDHA4-203ENST00000530339 WNT5AP41221 380 aa13.27□□□□□ -0.29
PCDHA4-203ENST00000530339 CBLN4Q9NTU7 201 aa13.27□□□□□ -0.29
PCDHA4-203ENST00000530339 PATE3B3GLJ2 98 aa13.27□□□□□ -0.29
PCDHA4-203ENST00000530339 IGKV3-11P04433 115 aa13.27□□□□□ -0.29
PCDHA4-203ENST00000530339 GPR6P46095 362 aaPredicted RBP13.27□□□□□ -0.29
PCDHA4-203ENST00000530339 MNX1P50219 401 aaPredicted RBP13.27□□□□□ -0.29
PCDHA4-203ENST00000530339 ZNF137PP52743 207 aa13.27□□□□□ -0.29
PCDHA4-203ENST00000530339 ERVFRD-1P60508 538 aa13.27□□□□□ -0.29
PCDHA4-203ENST00000530339 PQLC2Q6ZP29 291 aa13.27□□□□□ -0.29
PCDHA4-203ENST00000530339 OR8A1Q8NGG7 326 aa13.27□□□□□ -0.29
PCDHA4-203ENST00000530339 HINT1P49773 126 aaPredicted RBP13.26□□□□□ -0.29
PCDHA4-203ENST00000530339 FOXL2P58012 376 aa13.26□□□□□ -0.29
PCDHA4-203ENST00000530339 SNAI3Q3KNW1 292 aa13.26□□□□□ -0.29
PCDHA4-203ENST00000530339 TP53RKQ96S44 253 aa13.26□□□□□ -0.29
PCDHA4-203ENST00000530339 LINC00470Q9BZP3 86 aa13.26□□□□□ -0.29
PCDHA4-203ENST00000530339 LNP1A1A4G5 178 aa13.26□□□□□ -0.29
PCDHA4-203ENST00000530339 RHBDL1O75783 438 aa13.26□□□□□ -0.29
PCDHA4-203ENST00000530339 ADRA2AP08913 450 aa13.26□□□□□ -0.29
PCDHA4-203ENST00000530339 HERVK_113P61574 105 aa13.26□□□□□ -0.29
PCDHA4-203ENST00000530339 SAP25Q8TEE9 199 aa13.26□□□□□ -0.29
PCDHA4-203ENST00000530339 SFXN3Q9BWM7 321 aa13.26□□□□□ -0.29
PCDHA4-203ENST00000530339 RALGAPA2Q2PPJ7 1873 aa13.26□□□□□ -0.29
PCDHA4-203ENST00000530339 POLR2AP24928 1970 aaKnown RBP13.26□□□□□ -0.29
PCDHA4-203ENST00000530339 LOC102724200A0A096LPH7 203 aaPredicted RBP13.26□□□□□ -0.29
PCDHA4-203ENST00000530339 C12orf54Q6X4T0 127 aa13.26□□□□□ -0.29
PCDHA4-203ENST00000530339 C19orf24Q9BVV8 132 aa13.26□□□□□ -0.29
PCDHA4-203ENST00000530339 COA4Q9NYJ1 87 aa13.26□□□□□ -0.29
PCDHA4-203ENST00000530339 IL36RNQ9UBH0 155 aa13.26□□□□□ -0.29
PCDHA4-203ENST00000530339 OR2H2O95918 312 aa13.26□□□□□ -0.29
PCDHA4-203ENST00000530339 TNFRSF9Q07011 255 aa13.26□□□□□ -0.29
PCDHA4-203ENST00000530339 ZNF788Q6ZQV5 615 aa13.26□□□□□ -0.29
PCDHA4-203ENST00000530339 ZNF714Q96N38 554 aa13.26□□□□□ -0.29
PCDHA4-203ENST00000530339 TUBA4BQ9H853 241 aa13.26□□□□□ -0.29
PCDHA4-203ENST00000530339 RPL31P62899 125 aaKnown RBP13.26□□□□□ -0.29
PCDHA4-203ENST00000530339 OR4A47Q6IF82 309 aa13.26□□□□□ -0.29
PCDHA4-203ENST00000530339 GPHA2Q96T91 129 aa13.26□□□□□ -0.29
PCDHA4-203ENST00000530339 HIGD1AQ9Y241 93 aa13.26□□□□□ -0.29
PCDHA4-203ENST00000530339 ZFP30Q9Y2G7 519 aa13.26□□□□□ -0.29
PCDHA4-203ENST00000530339 A0A1B0GTI1 187 aa13.25□□□□□ -0.29
PCDHA4-203ENST00000530339 QTRT1Q9BXR0 403 aaKnown RBP13.25□□□□□ -0.29
PCDHA4-203ENST00000530339 UFC1Q9Y3C8 167 aa13.25□□□□□ -0.29
PCDHA4-203ENST00000530339 ZNF729A6NN14 1252 aaPredicted RBP13.25□□□□□ -0.29
PCDHA4-203ENST00000530339 NRN1LQ496H8 165 aa13.25□□□□□ -0.29
PCDHA4-203ENST00000530339 SCGB1D4Q6XE38 83 aa13.25□□□□□ -0.29
PCDHA4-203ENST00000530339 FAM216AQ8WUB2 273 aa13.25□□□□□ -0.29
PCDHA4-203ENST00000530339 TMEM45BQ96B21 275 aa13.25□□□□□ -0.29
PCDHA4-203ENST00000530339 GALNT14Q96FL9 552 aa13.25□□□□□ -0.29
PCDHA4-203ENST00000530339 CLDN14O95500 239 aa13.25□□□□□ -0.29
PCDHA4-203ENST00000530339 ZNF818PQ6ZRF7 136 aa13.25□□□□□ -0.29
PCDHA4-203ENST00000530339 COL25A1Q9BXS0 654 aaPredicted RBP13.25□□□□□ -0.29
PCDHA4-203ENST00000530339 DLL3Q9NYJ7 618 aa13.25□□□□□ -0.29
PCDHA4-203ENST00000530339 F5H697 171 aa13.25□□□□□ -0.29
PCDHA4-203ENST00000530339 HYPMO75409 117 aa13.25□□□□□ -0.29
PCDHA4-203ENST00000530339 STAG3L2P0CL84 134 aa13.25□□□□□ -0.29
PCDHA4-203ENST00000530339 MPV17P39210 176 aa13.25□□□□□ -0.29
PCDHA4-203ENST00000530339 SLC25A45Q8N413 288 aa13.25□□□□□ -0.29
PCDHA4-203ENST00000530339 SLC25A33Q9BSK2 321 aa13.25□□□□□ -0.29
PCDHA4-203ENST00000530339 RPRMQ9NS64 109 aa13.24□□□□□ -0.29
PCDHA4-203ENST00000530339 JPT1Q9UK76 154 aa13.24□□□□□ -0.29
PCDHA4-203ENST00000530339 SCN10AQ9Y5Y9 1956 aa13.24□□□□□ -0.29
PCDHA4-203ENST00000530339 MIC13Q5XKP0 118 aa13.24□□□□□ -0.29
PCDHA4-203ENST00000530339 DCAF16Q9NXF7 216 aa13.24□□□□□ -0.29
PCDHA4-203ENST00000530339 PILRBQ9UKJ0 227 aa13.24□□□□□ -0.29
PCDHA4-203ENST00000530339 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.24□□□□□ -0.29
PCDHA4-203ENST00000530339 COX6A1P12074 109 aa13.24□□□□□ -0.29
PCDHA4-203ENST00000530339 KCNMB1Q16558 191 aa13.24□□□□□ -0.29
PCDHA4-203ENST00000530339 RBM14Q96PK6 669 aaKnown RBP13.24□□□□□ -0.29
PCDHA4-203ENST00000530339 VENTXO95231 258 aa13.24□□□□□ -0.29
PCDHA4-203ENST00000530339 DYNLRB2Q8TF09 96 aa13.24□□□□□ -0.29
PCDHA4-203ENST00000530339 SNRNP40Q96DI7 357 aaKnown RBP13.24□□□□□ -0.29
PCDHA4-203ENST00000530339 HS3ST3B1Q9Y662 390 aa13.24□□□□□ -0.29
PCDHA4-203ENST00000530339 A0A1W2PR77 199 aa13.23□□□□□ -0.29
PCDHA4-203ENST00000530339 LINC00587B1AMM8 73 aa13.23□□□□□ -0.29
PCDHA4-203ENST00000530339 RPL7P18124 248 aaKnown RBP13.23□□□□□ -0.29
PCDHA4-203ENST00000530339 PTGDSP41222 190 aa13.23□□□□□ -0.29
PCDHA4-203ENST00000530339 GBGT1Q8N5D6 347 aa13.23□□□□□ -0.29
PCDHA4-203ENST00000530339 TPRX1Q8N7U7 411 aa13.23□□□□□ -0.29
PCDHA4-203ENST00000530339 DLL1O00548 723 aa13.23□□□□□ -0.29
PCDHA4-203ENST00000530339 SP9P0CG40 484 aa13.23□□□□□ -0.29
PCDHA4-203ENST00000530339 HOXA5P20719 270 aa13.23□□□□□ -0.29
PCDHA4-203ENST00000530339 SCNM1Q9BWG6 230 aa13.23□□□□□ -0.29
PCDHA4-203ENST00000530339 A0A087WWC5 75 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms