RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 BTBD17A6NE02 478 aa9.79□□□□□ -0.84
USF1-208ENST00000528768 RNASEK-C17orf49H0YIS7 233 aa9.79□□□□□ -0.84
USF1-208ENST00000528768 TOR1AO14656 332 aa9.79□□□□□ -0.84
USF1-208ENST00000528768 SPRY3O43610 288 aa9.79□□□□□ -0.84
USF1-208ENST00000528768 SYNGR2O43760 224 aa9.79□□□□□ -0.84
USF1-208ENST00000528768 SCO1O75880 301 aa9.79□□□□□ -0.84
USF1-208ENST00000528768 SNAPINO95295 136 aa9.79□□□□□ -0.84
USF1-208ENST00000528768 CD40P25942 277 aa9.79□□□□□ -0.84
USF1-208ENST00000528768 GATA4P43694 442 aa9.79□□□□□ -0.84
USF1-208ENST00000528768 SULT1A1P50225 295 aa9.79□□□□□ -0.84
USF1-208ENST00000528768 TNFAIP6P98066 277 aaPredicted RBP9.79□□□□□ -0.84
USF1-208ENST00000528768 BTN1A1Q13410 526 aa9.79□□□□□ -0.84
USF1-208ENST00000528768 MST1LQ2TV78 715 aa9.79□□□□□ -0.84
USF1-208ENST00000528768 TMEM30BQ3MIR4 351 aa9.79□□□□□ -0.84
USF1-208ENST00000528768 VHLLQ6RSH7 139 aa9.79□□□□□ -0.84
USF1-208ENST00000528768 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.79□□□□□ -0.84
USF1-208ENST00000528768 BOLLQ8N9W6 283 aaKnown RBP9.79□□□□□ -0.84
USF1-208ENST00000528768 HSD17B11Q8NBQ5 300 aa9.79□□□□□ -0.84
USF1-208ENST00000528768 SCGB1C1Q8TD33 95 aa9.79□□□□□ -0.84
USF1-208ENST00000528768 COQ2Q96H96 371 aa9.79□□□□□ -0.84
USF1-208ENST00000528768 OR2V2Q96R30 315 aa9.79□□□□□ -0.84
USF1-208ENST00000528768 ATP5SQ99766 215 aa9.79□□□□□ -0.84
USF1-208ENST00000528768 NKX6-2Q9C056 277 aaPredicted RBP9.79□□□□□ -0.84
USF1-208ENST00000528768 C19orf12Q9NSK7 152 aa9.79□□□□□ -0.84
USF1-208ENST00000528768 UQCC1Q9NVA1 299 aa9.79□□□□□ -0.84
USF1-208ENST00000528768 RNF7Q9UBF6 113 aa9.79□□□□□ -0.84
USF1-208ENST00000528768 CACNG5Q9UF02 275 aa9.79□□□□□ -0.84
USF1-208ENST00000528768 JPT1Q9UK76 154 aa9.79□□□□□ -0.84
USF1-208ENST00000528768 CARHSP1Q9Y2V2 147 aaKnown RBP9.79□□□□□ -0.84
USF1-208ENST00000528768 CHD3Q12873 2000 aaKnown RBP9.78□□□□□ -0.84
USF1-208ENST00000528768 ODAMA1E959 279 aa9.78□□□□□ -0.84
USF1-208ENST00000528768 ABCD4O14678 606 aa9.78□□□□□ -0.84
USF1-208ENST00000528768 GLIPR1P48060 266 aa9.78□□□□□ -0.84
USF1-208ENST00000528768 ARHGDIBP52566 201 aa9.78□□□□□ -0.84
USF1-208ENST00000528768 ZNF616Q08AN1 781 aa9.78□□□□□ -0.84
USF1-208ENST00000528768 CLINT1Q14677 625 aa9.78□□□□□ -0.84
USF1-208ENST00000528768 MIDNQ504T8 468 aa9.78□□□□□ -0.84
USF1-208ENST00000528768 MOGAT3Q86VF5 341 aa9.78□□□□□ -0.84
USF1-208ENST00000528768 ZNF561Q8N587 486 aa9.78□□□□□ -0.84
USF1-208ENST00000528768 GCSAMQ8N6F7 178 aa9.78□□□□□ -0.84
USF1-208ENST00000528768 CD177Q8N6Q3 437 aa9.78□□□□□ -0.84
USF1-208ENST00000528768 OR52L2PQ8NGH6 319 aa9.78□□□□□ -0.84
USF1-208ENST00000528768 OR5C1Q8NGR4 320 aa9.78□□□□□ -0.84
USF1-208ENST00000528768 OR2G3Q8NGZ4 309 aa9.78□□□□□ -0.84
USF1-208ENST00000528768 TMEM171Q8WVE6 324 aa9.78□□□□□ -0.84
USF1-208ENST00000528768 TCTEX1D2Q8WW35 142 aa9.78□□□□□ -0.84
USF1-208ENST00000528768 CIB3Q96Q77 187 aaPredicted RBP9.78□□□□□ -0.84
USF1-208ENST00000528768 SMDT1Q9H4I9 107 aa9.78□□□□□ -0.84
USF1-208ENST00000528768 WFDC1Q9HC57 220 aa9.78□□□□□ -0.84
USF1-208ENST00000528768 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.78□□□□□ -0.84
USF1-208ENST00000528768 PSENENQ9NZ42 101 aa9.78□□□□□ -0.84
USF1-208ENST00000528768 GNG12Q9UBI6 72 aa9.78□□□□□ -0.84
USF1-208ENST00000528768 RNF150Q9ULK6 438 aa9.78□□□□□ -0.84
USF1-208ENST00000528768 KPTNQ9Y664 436 aa9.78□□□□□ -0.84
USF1-208ENST00000528768 LRRC30A6NM36 301 aa9.77□□□□□ -0.85
USF1-208ENST00000528768 ATP6V1G2-DDX39BF2Z307 99 aa9.77□□□□□ -0.85
USF1-208ENST00000528768 C3orf80F5H4A9 247 aa9.77□□□□□ -0.85
USF1-208ENST00000528768 RAB29O14966 203 aa9.77□□□□□ -0.85
USF1-208ENST00000528768 IGLV2-14P01704 120 aa9.77□□□□□ -0.85
USF1-208ENST00000528768 HBE1P02100 147 aa9.77□□□□□ -0.85
USF1-208ENST00000528768 TNFRSF1AP19438 455 aa9.77□□□□□ -0.85
USF1-208ENST00000528768 OMGP23515 440 aa9.77□□□□□ -0.85
USF1-208ENST00000528768 KIR2DS2P43631 304 aa9.77□□□□□ -0.85
USF1-208ENST00000528768 GPR12P47775 334 aa9.77□□□□□ -0.85
USF1-208ENST00000528768 RAB7AP51149 207 aa9.77□□□□□ -0.85
USF1-208ENST00000528768 DYNLT3P51808 116 aa9.77□□□□□ -0.85
USF1-208ENST00000528768 FAM27E3Q08E93 113 aa9.77□□□□□ -0.85
USF1-208ENST00000528768 EDDM3AQ14507 147 aa9.77□□□□□ -0.85
USF1-208ENST00000528768 CR1LQ2VPA4 569 aa9.77□□□□□ -0.85
USF1-208ENST00000528768 FAM209AQ5JX71 171 aa9.77□□□□□ -0.85
USF1-208ENST00000528768 C10orf91Q5T1B1 145 aa9.77□□□□□ -0.85
USF1-208ENST00000528768 AKR1C8PQ5T2L2 129 aa9.77□□□□□ -0.85
USF1-208ENST00000528768 FGFRL1Q8N441 504 aa9.77□□□□□ -0.85
USF1-208ENST00000528768 LYPD6BQ8NI32 183 aa9.77□□□□□ -0.85
USF1-208ENST00000528768 UBALD1Q8TB05 177 aa9.77□□□□□ -0.85
USF1-208ENST00000528768 ITLN1Q8WWA0 313 aa9.77□□□□□ -0.85
USF1-208ENST00000528768 CLCC1Q96S66 551 aa9.77□□□□□ -0.85
USF1-208ENST00000528768 GPHA2Q96T91 129 aa9.77□□□□□ -0.85
USF1-208ENST00000528768 EGLN1Q9GZT9 426 aa9.77□□□□□ -0.85
USF1-208ENST00000528768 FAM234AQ9H0X4 552 aa9.77□□□□□ -0.85
USF1-208ENST00000528768 RNF115Q9Y4L5 304 aa9.77□□□□□ -0.85
USF1-208ENST00000528768 NKX6-3A6NJ46 265 aa9.76□□□□□ -0.85
USF1-208ENST00000528768 K7N7A8 449 aa9.76□□□□□ -0.85
USF1-208ENST00000528768 ITGB1BP1O14713 200 aa9.76□□□□□ -0.85
USF1-208ENST00000528768 TSPAN4O14817 238 aa9.76□□□□□ -0.85
USF1-208ENST00000528768 TXNL1O43396 289 aa9.76□□□□□ -0.85
USF1-208ENST00000528768 YPEL1O60688 119 aa9.76□□□□□ -0.85
USF1-208ENST00000528768 ZNF737O75373 536 aa9.76□□□□□ -0.85
USF1-208ENST00000528768 LHBP01229 141 aa9.76□□□□□ -0.85
USF1-208ENST00000528768 PPP1CCP36873 323 aaKnown RBP9.76□□□□□ -0.85
USF1-208ENST00000528768 ATP6V1FQ16864 119 aa9.76□□□□□ -0.85
USF1-208ENST00000528768 ZNF585BQ52M93 769 aa9.76□□□□□ -0.85
USF1-208ENST00000528768 TMEM182Q6ZP80 229 aaPredicted RBP9.76□□□□□ -0.85
USF1-208ENST00000528768 H2BFWTQ7Z2G1 175 aa9.76□□□□□ -0.85
USF1-208ENST00000528768 LRP11Q86VZ4 500 aa9.76□□□□□ -0.85
USF1-208ENST00000528768 OR13A1Q8NGR1 328 aa9.76□□□□□ -0.85
USF1-208ENST00000528768 LINC01560Q8TB33 94 aa9.76□□□□□ -0.85
USF1-208ENST00000528768 FAM213BQ8TBF2 198 aa9.76□□□□□ -0.85
USF1-208ENST00000528768 Q8TCH9 128 aa9.76□□□□□ -0.85
USF1-208ENST00000528768 BSCL2Q96G97 398 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms