RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 P2RX4Q99571 388 aa12.14□□□□□ -0.47
CAPN1-213ENST00000527897 TSNAXQ99598 290 aaKnown RBP12.14□□□□□ -0.47
CAPN1-213ENST00000527897 FAM103A1Q9BTL3 118 aaKnown RBP12.14□□□□□ -0.47
CAPN1-213ENST00000527897 SDHAF2Q9NX18 166 aa12.14□□□□□ -0.47
CAPN1-213ENST00000527897 RHBDL2Q9NX52 303 aa12.14□□□□□ -0.47
CAPN1-213ENST00000527897 FBXO7Q9Y3I1 522 aa12.14□□□□□ -0.47
CAPN1-213ENST00000527897 SLC25A17O43808 307 aa12.13□□□□□ -0.47
CAPN1-213ENST00000527897 SCGNO76038 276 aa12.13□□□□□ -0.47
CAPN1-213ENST00000527897 CA2P00918 260 aa12.13□□□□□ -0.47
CAPN1-213ENST00000527897 DTYMKP23919 212 aa12.13□□□□□ -0.47
CAPN1-213ENST00000527897 PPIFP30405 207 aaKnown RBP12.13□□□□□ -0.47
CAPN1-213ENST00000527897 CBX3Q13185 183 aa12.13□□□□□ -0.47
CAPN1-213ENST00000527897 ZNF660Q6AZW8 331 aaPredicted RBP12.13□□□□□ -0.47
CAPN1-213ENST00000527897 RNF152Q8N8N0 203 aa12.13□□□□□ -0.47
CAPN1-213ENST00000527897 OR5H6Q8NGV6 325 aa12.13□□□□□ -0.47
CAPN1-213ENST00000527897 FLYWCH2Q96CP2 140 aaKnown RBP12.13□□□□□ -0.47
CAPN1-213ENST00000527897 RNF5Q99942 180 aa12.13□□□□□ -0.47
CAPN1-213ENST00000527897 VCX3AQ9NNX9 186 aa12.13□□□□□ -0.47
CAPN1-213ENST00000527897 TPSG1Q9NRR2 321 aa12.13□□□□□ -0.47
CAPN1-213ENST00000527897 ZNF580Q9UK33 172 aa12.13□□□□□ -0.47
CAPN1-213ENST00000527897 GAB2Q9UQC2 676 aa12.13□□□□□ -0.47
CAPN1-213ENST00000527897 TGFBR1P36897 503 aa12.12□□□□□ -0.47
CAPN1-213ENST00000527897 LSM3P62310 102 aaKnown RBP12.12□□□□□ -0.47
CAPN1-213ENST00000527897 GNB1P62873 340 aa12.12□□□□□ -0.47
CAPN1-213ENST00000527897 ZNF260Q3ZCT1 412 aa12.12□□□□□ -0.47
CAPN1-213ENST00000527897 PPP1R27Q86WC6 154 aa12.12□□□□□ -0.47
CAPN1-213ENST00000527897 TSPAN14Q8NG11 270 aa12.12□□□□□ -0.47
CAPN1-213ENST00000527897 GRPEL2Q8TAA5 225 aa12.12□□□□□ -0.47
CAPN1-213ENST00000527897 C4orf3Q8WVX3 66 aa12.12□□□□□ -0.47
CAPN1-213ENST00000527897 MCRIP2Q9BUT9 160 aaKnown RBP12.12□□□□□ -0.47
CAPN1-213ENST00000527897 GPR61Q9BZJ8 451 aa12.12□□□□□ -0.47
CAPN1-213ENST00000527897 TOLLIPQ9H0E2 274 aa12.12□□□□□ -0.47
CAPN1-213ENST00000527897 GNB4Q9HAV0 340 aa12.12□□□□□ -0.47
CAPN1-213ENST00000527897 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.12□□□□□ -0.47
CAPN1-213ENST00000527897 TRAV18A0A075B6X5 111 aa12.11□□□□□ -0.47
CAPN1-213ENST00000527897 A0A087WXM4 84 aa12.11□□□□□ -0.47
CAPN1-213ENST00000527897 TNFAIP8O95379 198 aa12.11□□□□□ -0.47
CAPN1-213ENST00000527897 DIRAS3O95661 229 aa12.11□□□□□ -0.47
CAPN1-213ENST00000527897 NFYAP23511 347 aaPredicted RBP12.11□□□□□ -0.47
CAPN1-213ENST00000527897 RAB9AP51151 201 aa12.11□□□□□ -0.47
CAPN1-213ENST00000527897 KRTAP10-11P60412 298 aa12.11□□□□□ -0.47
CAPN1-213ENST00000527897 PITPNAQ00169 270 aa12.11□□□□□ -0.47
CAPN1-213ENST00000527897 TMEM267Q0VDI3 215 aaPredicted RBP12.11□□□□□ -0.47
CAPN1-213ENST00000527897 SRSF7Q16629 238 aaKnown RBP eCLIP12.11□□□□□ -0.47
CAPN1-213ENST00000527897 RTL8BQ17RB0 113 aa12.11□□□□□ -0.47
CAPN1-213ENST00000527897 TIMM50Q3ZCQ8 353 aa12.11□□□□□ -0.47
CAPN1-213ENST00000527897 UNQ5815/PRO19632Q6UWF5 114 aa12.11□□□□□ -0.47
CAPN1-213ENST00000527897 H1FOOQ8IZA3 346 aaPredicted RBP12.11□□□□□ -0.47
CAPN1-213ENST00000527897 BVESQ8NE79 360 aa12.11□□□□□ -0.47
CAPN1-213ENST00000527897 OR11H1Q8NG94 326 aa12.11□□□□□ -0.47
CAPN1-213ENST00000527897 OR5M8Q8NGP6 311 aa12.11□□□□□ -0.47
CAPN1-213ENST00000527897 C5orf30Q96GV9 206 aa12.11□□□□□ -0.47
CAPN1-213ENST00000527897 HARBI1Q96MB7 349 aa12.11□□□□□ -0.47
CAPN1-213ENST00000527897 FOXA2Q9Y261 457 aaPredicted RBP12.11□□□□□ -0.47
CAPN1-213ENST00000527897 VSIG4Q9Y279 399 aa12.11□□□□□ -0.47
CAPN1-213ENST00000527897 SHOXO15266 292 aa12.1□□□□□ -0.47
CAPN1-213ENST00000527897 AIREO43918 545 aa12.1□□□□□ -0.47
CAPN1-213ENST00000527897 SPDEFO95238 335 aa12.1□□□□□ -0.47
CAPN1-213ENST00000527897 CNIH1O95406 144 aa12.1□□□□□ -0.47
CAPN1-213ENST00000527897 IGLV1-40P01703 118 aa12.1□□□□□ -0.47
CAPN1-213ENST00000527897 FCER2P06734 321 aa12.1□□□□□ -0.47
CAPN1-213ENST00000527897 ACTBL2Q562R1 376 aa12.1□□□□□ -0.47
CAPN1-213ENST00000527897 DEFB121Q5J5C9 76 aa12.1□□□□□ -0.47
CAPN1-213ENST00000527897 Q6ZS49 121 aa12.1□□□□□ -0.47
CAPN1-213ENST00000527897 ZNF491Q8N8L2 437 aa12.1□□□□□ -0.47
CAPN1-213ENST00000527897 MINDY2Q8NBR6 621 aa12.1□□□□□ -0.47
CAPN1-213ENST00000527897 LFNGQ8NES3 379 aa12.1□□□□□ -0.47
CAPN1-213ENST00000527897 SLC25A38Q96DW6 304 aa12.1□□□□□ -0.47
CAPN1-213ENST00000527897 UBE2E2Q96LR5 201 aa12.1□□□□□ -0.47
CAPN1-213ENST00000527897 MS4A10Q96PG2 267 aa12.1□□□□□ -0.47
CAPN1-213ENST00000527897 DCSTAMPQ9H295 470 aa12.1□□□□□ -0.47
CAPN1-213ENST00000527897 ETV7Q9Y603 341 aa12.1□□□□□ -0.47
CAPN1-213ENST00000527897 SSX5O60225 188 aa12.09□□□□□ -0.47
CAPN1-213ENST00000527897 SOX15O60248 233 aa12.09□□□□□ -0.47
CAPN1-213ENST00000527897 TUSC2O75896 110 aa12.09□□□□□ -0.47
CAPN1-213ENST00000527897 CTXN2P0C2S0 81 aa12.09□□□□□ -0.47
CAPN1-213ENST00000527897 EGR2P11161 476 aaPredicted RBP12.09□□□□□ -0.47
CAPN1-213ENST00000527897 LUMP51884 338 aaPredicted RBP12.09□□□□□ -0.47
CAPN1-213ENST00000527897 ARPC4P59998 168 aa12.09□□□□□ -0.47
CAPN1-213ENST00000527897 PJVKQ0ZLH3 352 aa12.09□□□□□ -0.47
CAPN1-213ENST00000527897 FXYD3Q14802 87 aa12.09□□□□□ -0.47
CAPN1-213ENST00000527897 ZNF562Q6V9R5 426 aa12.09□□□□□ -0.47
CAPN1-213ENST00000527897 OR1N2Q8NGR9 330 aa12.09□□□□□ -0.47
CAPN1-213ENST00000527897 ARPC1AQ92747 370 aa12.09□□□□□ -0.47
CAPN1-213ENST00000527897 DCUN1D5Q9BTE7 237 aa12.09□□□□□ -0.47
CAPN1-213ENST00000527897 ALX4Q9H161 411 aaPredicted RBP12.09□□□□□ -0.47
CAPN1-213ENST00000527897 ZNF355PQ9NSJ1 428 aa12.09□□□□□ -0.47
CAPN1-213ENST00000527897 NUBP2Q9Y5Y2 271 aa12.09□□□□□ -0.47
CAPN1-213ENST00000527897 WI2-2373I1.2A0A1W2PRP0 233 aa12.08□□□□□ -0.48
CAPN1-213ENST00000527897 K7EIL1 84 aa12.08□□□□□ -0.48
CAPN1-213ENST00000527897 CRYZL1O95825 349 aa12.08□□□□□ -0.48
CAPN1-213ENST00000527897 CD40LGP29965 261 aa12.08□□□□□ -0.48
CAPN1-213ENST00000527897 LGALS7P47929 136 aa12.08□□□□□ -0.48
CAPN1-213ENST00000527897 CRIP2P52943 208 aaPredicted RBP12.08□□□□□ -0.48
CAPN1-213ENST00000527897 SCAND1P57086 179 aa12.08□□□□□ -0.48
CAPN1-213ENST00000527897 KIAA0141Q14154 515 aaPredicted RBP12.08□□□□□ -0.48
CAPN1-213ENST00000527897 OR2B11Q5JQS5 317 aa12.08□□□□□ -0.48
CAPN1-213ENST00000527897 CNIH2Q6PI25 160 aa12.08□□□□□ -0.48
CAPN1-213ENST00000527897 GVQW1Q8N7I0 195 aa12.08□□□□□ -0.48
CAPN1-213ENST00000527897 TCTEX1D1Q8N7M0 179 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms