RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 DSCAMO60469 2012 aa12.76□□□□□ -0.37
USH1C-207ENST00000527720 A0A087WWC5 75 aa12.76□□□□□ -0.37
USH1C-207ENST00000527720 UBE2L5PA0A1B0GUS4 154 aa12.76□□□□□ -0.37
USH1C-207ENST00000527720 DEFB108AA8MXU0 73 aa12.76□□□□□ -0.37
USH1C-207ENST00000527720 KLK10O43240 276 aa12.76□□□□□ -0.37
USH1C-207ENST00000527720 RBFOX2O43251 390 aaKnown RBP eCLIP12.76□□□□□ -0.37
USH1C-207ENST00000527720 NBL1P41271 181 aa12.76□□□□□ -0.37
USH1C-207ENST00000527720 OR8G2PQ6IF36 304 aa12.76□□□□□ -0.37
USH1C-207ENST00000527720 ZNF561Q8N587 486 aa12.76□□□□□ -0.37
USH1C-207ENST00000527720 FAM222BQ8WU58 562 aa12.76□□□□□ -0.37
USH1C-207ENST00000527720 RCC1LQ96I51 464 aaKnown RBP12.76□□□□□ -0.37
USH1C-207ENST00000527720 GAB2Q9UQC2 676 aa12.76□□□□□ -0.37
USH1C-207ENST00000527720 CUL9Q8IWT3 2517 aa12.76□□□□□ -0.37
USH1C-207ENST00000527720 DMXL1Q9Y485 3027 aa12.76□□□□□ -0.37
USH1C-207ENST00000527720 PMS2P5A8MQ11 134 aa12.76□□□□□ -0.37
USH1C-207ENST00000527720 HPRT1P00492 218 aa12.76□□□□□ -0.37
USH1C-207ENST00000527720 BCL2P10415 239 aa12.76□□□□□ -0.37
USH1C-207ENST00000527720 ZNF726P1Q15940 193 aa12.76□□□□□ -0.37
USH1C-207ENST00000527720 ZNF429Q86V71 674 aa12.76□□□□□ -0.37
USH1C-207ENST00000527720 CYB561D1Q8N8Q1 229 aa12.76□□□□□ -0.37
USH1C-207ENST00000527720 OR10P1Q8NGE3 313 aa12.76□□□□□ -0.37
USH1C-207ENST00000527720 ITLN1Q8WWA0 313 aa12.76□□□□□ -0.37
USH1C-207ENST00000527720 MALSU1Q96EH3 234 aa12.76□□□□□ -0.37
USH1C-207ENST00000527720 P2RX4Q99571 388 aa12.76□□□□□ -0.37
USH1C-207ENST00000527720 VSIRQ9H7M9 311 aa12.76□□□□□ -0.37
USH1C-207ENST00000527720 CLN8Q9UBY8 286 aa12.76□□□□□ -0.37
USH1C-207ENST00000527720 ZNF292O60281 2723 aa12.75□□□□□ -0.37
USH1C-207ENST00000527720 A8MXE2 369 aa12.75□□□□□ -0.37
USH1C-207ENST00000527720 LOXL3P58215 753 aa12.75□□□□□ -0.37
USH1C-207ENST00000527720 HABP2Q14520 560 aaPredicted RBP12.75□□□□□ -0.37
USH1C-207ENST00000527720 FAM180AQ6UWF9 173 aa12.75□□□□□ -0.37
USH1C-207ENST00000527720 SLC35E3Q7Z769 313 aa12.75□□□□□ -0.37
USH1C-207ENST00000527720 LINC00518Q8N0U6 118 aa12.75□□□□□ -0.37
USH1C-207ENST00000527720 R3HDM4Q96D70 268 aa12.75□□□□□ -0.37
USH1C-207ENST00000527720 TVP23CQ96ET8 276 aa12.75□□□□□ -0.37
USH1C-207ENST00000527720 NIPSNAP3BQ9BS92 247 aa12.75□□□□□ -0.37
USH1C-207ENST00000527720 IL19Q9UHD0 177 aa12.75□□□□□ -0.37
USH1C-207ENST00000527720 CADP27708 2225 aa12.75□□□□□ -0.37
USH1C-207ENST00000527720 DSPP15924 2871 aaKnown RBP12.75□□□□□ -0.37
USH1C-207ENST00000527720 IGHV3OR15-7A0A075B7D8 119 aa12.74□□□□□ -0.37
USH1C-207ENST00000527720 A0A1W2PPH5 198 aa12.74□□□□□ -0.37
USH1C-207ENST00000527720 SPRY3O43610 288 aa12.74□□□□□ -0.37
USH1C-207ENST00000527720 ZG16O60844 167 aa12.74□□□□□ -0.37
USH1C-207ENST00000527720 MBP02144 154 aa12.74□□□□□ -0.37
USH1C-207ENST00000527720 DAOP14920 347 aa12.74□□□□□ -0.37
USH1C-207ENST00000527720 KIR2DS2P43631 304 aa12.74□□□□□ -0.37
USH1C-207ENST00000527720 GNB2P62879 340 aa12.74□□□□□ -0.37
USH1C-207ENST00000527720 VWC2Q2TAL6 325 aa12.74□□□□□ -0.37
USH1C-207ENST00000527720 NCR3LG1Q68D85 454 aa12.74□□□□□ -0.37
USH1C-207ENST00000527720 ALKBH2Q6NS38 261 aa12.74□□□□□ -0.37
USH1C-207ENST00000527720 GNG13Q9P2W3 67 aa12.74□□□□□ -0.37
USH1C-207ENST00000527720 IFNA1P01562 189 aa12.74□□□□□ -0.37
USH1C-207ENST00000527720 IFNA4P05014 189 aa12.74□□□□□ -0.37
USH1C-207ENST00000527720 CGB3P0DN86 165 aa12.74□□□□□ -0.37
USH1C-207ENST00000527720 CGB7P0DN87 165 aa12.74□□□□□ -0.37
USH1C-207ENST00000527720 RAB5AP20339 215 aa12.74□□□□□ -0.37
USH1C-207ENST00000527720 AGAP20933 346 aa12.74□□□□□ -0.37
USH1C-207ENST00000527720 RAB7AP51149 207 aa12.74□□□□□ -0.37
USH1C-207ENST00000527720 MRGPRGQ86SM5 289 aa12.74□□□□□ -0.37
USH1C-207ENST00000527720 ZNRF1Q8ND25 227 aa12.74□□□□□ -0.37
USH1C-207ENST00000527720 ISOC2Q96AB3 205 aa12.74□□□□□ -0.37
USH1C-207ENST00000527720 RAB39BQ96DA2 213 aa12.74□□□□□ -0.37
USH1C-207ENST00000527720 RNF7Q9UBF6 113 aa12.74□□□□□ -0.37
USH1C-207ENST00000527720 SPENQ96T58 3664 aaKnown RBP12.74□□□□□ -0.37
USH1C-207ENST00000527720 A0A1W2PPE2 198 aa12.73□□□□□ -0.37
USH1C-207ENST00000527720 CEBPZOSA8MTT3 80 aa12.73□□□□□ -0.37
USH1C-207ENST00000527720 B4DEV8 164 aa12.73□□□□□ -0.37
USH1C-207ENST00000527720 MKRN2OSH3BPM6 223 aa12.73□□□□□ -0.37
USH1C-207ENST00000527720 K7EM74 188 aa12.73□□□□□ -0.37
USH1C-207ENST00000527720 PROP1O75360 226 aa12.73□□□□□ -0.37
USH1C-207ENST00000527720 RBMXL2O75526 392 aaKnown RBP12.73□□□□□ -0.37
USH1C-207ENST00000527720 LTC4SQ16873 150 aa12.73□□□□□ -0.37
USH1C-207ENST00000527720 SPRNQ5BIV9 151 aa12.73□□□□□ -0.37
USH1C-207ENST00000527720 VHLLQ6RSH7 139 aa12.73□□□□□ -0.37
USH1C-207ENST00000527720 LCN15Q6UWW0 184 aa12.73□□□□□ -0.37
USH1C-207ENST00000527720 SDSLQ96GA7 329 aa12.73□□□□□ -0.37
USH1C-207ENST00000527720 CALYQ9NYX4 217 aa12.73□□□□□ -0.37
USH1C-207ENST00000527720 RAI1Q7Z5J4 1906 aaPredicted RBP12.73□□□□□ -0.37
USH1C-207ENST00000527720 MAP1LC3B2A6NCE7 125 aa12.73□□□□□ -0.37
USH1C-207ENST00000527720 OR2C1O95371 312 aa12.73□□□□□ -0.37
USH1C-207ENST00000527720 TNFSF4P23510 183 aa12.73□□□□□ -0.37
USH1C-207ENST00000527720 EDDM3BP56851 147 aa12.73□□□□□ -0.37
USH1C-207ENST00000527720 NUP37Q8NFH4 326 aa12.73□□□□□ -0.37
USH1C-207ENST00000527720 OR52E5Q8NH55 327 aa12.73□□□□□ -0.37
USH1C-207ENST00000527720 ZDHHC16Q969W1 377 aa12.73□□□□□ -0.37
USH1C-207ENST00000527720 YPEL4Q96NS1 127 aa12.73□□□□□ -0.37
USH1C-207ENST00000527720 MAP1LC3BQ9GZQ8 125 aa12.73□□□□□ -0.37
USH1C-207ENST00000527720 ZNF665Q9H7R5 613 aa12.73□□□□□ -0.37
USH1C-207ENST00000527720 SIRT7Q9NRC8 400 aa12.73□□□□□ -0.37
USH1C-207ENST00000527720 CFAP47Q6ZTR5 3102 aa12.73□□□□□ -0.37
USH1C-207ENST00000527720 CXorf65A6NEN9 183 aa12.72□□□□□ -0.37
USH1C-207ENST00000527720 FCGR3BO75015 233 aa12.72□□□□□ -0.37
USH1C-207ENST00000527720 NDUFS6O75380 124 aaKnown RBP12.72□□□□□ -0.37
USH1C-207ENST00000527720 ARG1P05089 322 aa12.72□□□□□ -0.37
USH1C-207ENST00000527720 CD40P25942 277 aa12.72□□□□□ -0.37
USH1C-207ENST00000527720 TAGLN2P37802 199 aaKnown RBP12.72□□□□□ -0.37
USH1C-207ENST00000527720 DLK1P80370 383 aa12.72□□□□□ -0.37
USH1C-207ENST00000527720 PDLIM3Q53GG5 364 aaPredicted RBP12.72□□□□□ -0.37
USH1C-207ENST00000527720 SSX7Q7RTT5 188 aa12.72□□□□□ -0.37
USH1C-207ENST00000527720 ZFP82Q8N141 532 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms