RNA–Protein interactions for RNA: ENST00000527718.1

PABPC4-222, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 5

Gene PABPC4, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-222	ENST00000527718	SAT2	Q96F10	170 aa	Predicted RBP	5.22	□□□□□ -1.57
PABPC4-222	ENST00000527718	COQ2	Q96H96	371 aa		5.22	□□□□□ -1.57
PABPC4-222	ENST00000527718	EAF1	Q96JC9	268 aa	Predicted RBP	5.22	□□□□□ -1.57
PABPC4-222	ENST00000527718	TXN2	Q99757	166 aa		5.22	□□□□□ -1.57
PABPC4-222	ENST00000527718	TMEM204	Q9BSN7	226 aa		5.22	□□□□□ -1.57
PABPC4-222	ENST00000527718	HIPK2	Q9H2X6	1198 aa		5.22	□□□□□ -1.57
PABPC4-222	ENST00000527718	CHODL	Q9H9P2	273 aa		5.22	□□□□□ -1.57
PABPC4-222	ENST00000527718	KCNIP2	Q9NS61	270 aa		5.22	□□□□□ -1.57
PABPC4-222	ENST00000527718	MED9	Q9NWA0	146 aa		5.22	□□□□□ -1.57
PABPC4-222	ENST00000527718	GFOD1	Q9NXC2	390 aa		5.22	□□□□□ -1.57
PABPC4-222	ENST00000527718	CRIM1	Q9NZV1	1036 aa		5.22	□□□□□ -1.57
PABPC4-222	ENST00000527718	CBY1	Q9Y3M2	126 aa		5.22	□□□□□ -1.57
PABPC4-222	ENST00000527718	KLF2	Q9Y5W3	355 aa	Predicted RBP	5.22	□□□□□ -1.57
PABPC4-222	ENST00000527718	SVIL	O95425	2214 aa		5.21	□□□□□ -1.57
PABPC4-222	ENST00000527718	IGHV3-64D	A0A0J9YX35	117 aa		5.21	□□□□□ -1.58
PABPC4-222	ENST00000527718	NKX2-6	A6NCS4	301 aa		5.21	□□□□□ -1.58
PABPC4-222	ENST00000527718		F8W735	103 aa	Predicted RBP	5.21	□□□□□ -1.58
PABPC4-222	ENST00000527718	TRIM77	I1YAP6	450 aa		5.21	□□□□□ -1.58
PABPC4-222	ENST00000527718	NDUFS8	O00217	210 aa		5.21	□□□□□ -1.58
PABPC4-222	ENST00000527718	ZG16	O60844	167 aa		5.21	□□□□□ -1.58
PABPC4-222	ENST00000527718	CYB5R3	P00387	301 aa	Predicted RBP	5.21	□□□□□ -1.58
PABPC4-222	ENST00000527718	GYPA	P02724	150 aa		5.21	□□□□□ -1.58
PABPC4-222	ENST00000527718	LIPF	P07098	398 aa		5.21	□□□□□ -1.58
PABPC4-222	ENST00000527718	FGF2	P09038	288 aa		5.21	□□□□□ -1.58
PABPC4-222	ENST00000527718	EPHA1	P21709	976 aa		5.21	□□□□□ -1.58
PABPC4-222	ENST00000527718	SSTR2	P30874	369 aa		5.21	□□□□□ -1.58
PABPC4-222	ENST00000527718	RAB11A	P62491	216 aa		5.21	□□□□□ -1.58
PABPC4-222	ENST00000527718	ADORA2A-AS1	P86434	159 aa		5.21	□□□□□ -1.58
PABPC4-222	ENST00000527718	EXOSC2	Q13868	293 aa	Known RBP	5.21	□□□□□ -1.58
PABPC4-222	ENST00000527718	SP6	Q3SY56	376 aa		5.21	□□□□□ -1.58
PABPC4-222	ENST00000527718	LAMTOR1	Q6IAA8	161 aa		5.21	□□□□□ -1.58
PABPC4-222	ENST00000527718	UQCC3	Q6UW78	93 aa		5.21	□□□□□ -1.58
PABPC4-222	ENST00000527718	DPPA3	Q6W0C5	159 aa		5.21	□□□□□ -1.58
PABPC4-222	ENST00000527718	LYZL2	Q7Z4W2	148 aa		5.21	□□□□□ -1.58
PABPC4-222	ENST00000527718	FOXRED2	Q8IWF2	684 aa		5.21	□□□□□ -1.58
PABPC4-222	ENST00000527718	SPAG16	Q8N0X2	631 aa		5.21	□□□□□ -1.58
PABPC4-222	ENST00000527718	OR2C3	Q8N628	320 aa		5.21	□□□□□ -1.58
PABPC4-222	ENST00000527718	COMMD1	Q8N668	190 aa		5.21	□□□□□ -1.58
PABPC4-222	ENST00000527718	UBAC2	Q8NBM4	344 aa		5.21	□□□□□ -1.58
PABPC4-222	ENST00000527718	DEFB108B	Q8NET1	73 aa		5.21	□□□□□ -1.58
PABPC4-222	ENST00000527718	DMBX1	Q8NFW5	382 aa		5.21	□□□□□ -1.58
PABPC4-222	ENST00000527718	OR11H4	Q8NGC9	324 aa		5.21	□□□□□ -1.58
PABPC4-222	ENST00000527718	OR1S2	Q8NGQ3	325 aa		5.21	□□□□□ -1.58
PABPC4-222	ENST00000527718	OR13A1	Q8NGR1	328 aa		5.21	□□□□□ -1.58
PABPC4-222	ENST00000527718	OR10X1	Q8NGY0	326 aa		5.21	□□□□□ -1.58
PABPC4-222	ENST00000527718	OR1L1	Q8NH94	360 aa		5.21	□□□□□ -1.58
PABPC4-222	ENST00000527718	LINC01560	Q8TB33	94 aa		5.21	□□□□□ -1.58
PABPC4-222	ENST00000527718	ZNF596	Q8TC21	504 aa		5.21	□□□□□ -1.58
PABPC4-222	ENST00000527718	SCGB1C1	Q8TD33	95 aa		5.21	□□□□□ -1.58
PABPC4-222	ENST00000527718	ST8SIA2	Q92186	375 aa		5.21	□□□□□ -1.58
PABPC4-222	ENST00000527718	H1FX	Q92522	213 aa	Known RBP	5.21	□□□□□ -1.58
PABPC4-222	ENST00000527718	NEIL1	Q96FI4	390 aa	Predicted RBP	5.21	□□□□□ -1.58
PABPC4-222	ENST00000527718	OR10C1	Q96KK4	312 aa		5.21	□□□□□ -1.58
PABPC4-222	ENST00000527718	GAFA1	Q96PS6	74 aa		5.21	□□□□□ -1.58
PABPC4-222	ENST00000527718	TP53RK	Q96S44	253 aa		5.21	□□□□□ -1.58
PABPC4-222	ENST00000527718	PCGF1	Q9BSM1	259 aa		5.21	□□□□□ -1.58
PABPC4-222	ENST00000527718	LYRM2	Q9NU23	88 aa	Predicted RBP	5.21	□□□□□ -1.58
PABPC4-222	ENST00000527718	OR1A1	Q9P1Q5	309 aa		5.21	□□□□□ -1.58
PABPC4-222	ENST00000527718	RPUSD1	Q9UJJ7	312 aa	Known RBP	5.21	□□□□□ -1.58
PABPC4-222	ENST00000527718	PSG11	Q9UQ72	335 aa		5.21	□□□□□ -1.58
PABPC4-222	ENST00000527718	STRAP	Q9Y3F4	350 aa	Known RBP	5.21	□□□□□ -1.58
PABPC4-222	ENST00000527718	FLNC	Q14315	2725 aa		5.21	□□□□□ -1.58
PABPC4-222	ENST00000527718	GCN1	Q92616	2671 aa	Known RBP	5.2	□□□□□ -1.58
PABPC4-222	ENST00000527718	IGHV3OR15-7	A0A075B7D8	119 aa		5.2	□□□□□ -1.58
PABPC4-222	ENST00000527718	TRAV14DV4	A0A0A6YYC5	116 aa		5.2	□□□□□ -1.58
PABPC4-222	ENST00000527718	IGKV1-6	A0A0C4DH72	117 aa		5.2	□□□□□ -1.58
PABPC4-222	ENST00000527718	LINC00862	A6NCI5	91 aa		5.2	□□□□□ -1.58
PABPC4-222	ENST00000527718	RNF222	A6NCQ9	220 aa		5.2	□□□□□ -1.58
PABPC4-222	ENST00000527718	BTBD17	A6NE02	478 aa		5.2	□□□□□ -1.58
PABPC4-222	ENST00000527718	KRBOX1	C9JBD0	128 aa		5.2	□□□□□ -1.58
PABPC4-222	ENST00000527718	C15orf65	H3BRN8	121 aa		5.2	□□□□□ -1.58
PABPC4-222	ENST00000527718	CYB5B	O43169	146 aa		5.2	□□□□□ -1.58
PABPC4-222	ENST00000527718	TNFSF12	O43508	249 aa		5.2	□□□□□ -1.58
PABPC4-222	ENST00000527718	SYNGR2	O43760	224 aa		5.2	□□□□□ -1.58
PABPC4-222	ENST00000527718	SPDEF	O95238	335 aa		5.2	□□□□□ -1.58
PABPC4-222	ENST00000527718	MB	P02144	154 aa		5.2	□□□□□ -1.58
PABPC4-222	ENST00000527718	PRB1	P04280	392 aa		5.2	□□□□□ -1.58
PABPC4-222	ENST00000527718	SEC11B	P0C7V7	166 aa		5.2	□□□□□ -1.58
PABPC4-222	ENST00000527718	EGR1	P18146	543 aa		5.2	□□□□□ -1.58
PABPC4-222	ENST00000527718	CXCL2	P19875	107 aa		5.2	□□□□□ -1.58
PABPC4-222	ENST00000527718	OMG	P23515	440 aa		5.2	□□□□□ -1.58
PABPC4-222	ENST00000527718	NFYB	P25208	207 aa		5.2	□□□□□ -1.58
PABPC4-222	ENST00000527718	SSTR5	P35346	364 aa		5.2	□□□□□ -1.58
PABPC4-222	ENST00000527718	PPP1CC	P36873	323 aa	Known RBP	5.2	□□□□□ -1.58
PABPC4-222	ENST00000527718	LPAR6	P43657	344 aa		5.2	□□□□□ -1.58
PABPC4-222	ENST00000527718	ERVFRD-1	P60508	538 aa		5.2	□□□□□ -1.58
PABPC4-222	ENST00000527718	ID3	Q02535	119 aa		5.2	□□□□□ -1.58
PABPC4-222	ENST00000527718	RAB31	Q13636	194 aa		5.2	□□□□□ -1.58
PABPC4-222	ENST00000527718	NMS	Q5H8A3	153 aa		5.2	□□□□□ -1.58
PABPC4-222	ENST00000527718	PXDC1	Q5TGL8	231 aa		5.2	□□□□□ -1.58
PABPC4-222	ENST00000527718	PRAMEF5	Q5TYX0	476 aa		5.2	□□□□□ -1.58
PABPC4-222	ENST00000527718	CCDC144NL	Q6NUI1	221 aa		5.2	□□□□□ -1.58
PABPC4-222	ENST00000527718	DTX2	Q86UW9	622 aa		5.2	□□□□□ -1.58
PABPC4-222	ENST00000527718	FGFRL1	Q8N441	504 aa		5.2	□□□□□ -1.58
PABPC4-222	ENST00000527718	ZNF843	Q8N446	348 aa		5.2	□□□□□ -1.58
PABPC4-222	ENST00000527718	LINC00311	Q8N616	119 aa		5.2	□□□□□ -1.58
PABPC4-222	ENST00000527718	ZNRF1	Q8ND25	227 aa		5.2	□□□□□ -1.58
PABPC4-222	ENST00000527718	LFNG	Q8NES3	379 aa		5.2	□□□□□ -1.58
PABPC4-222	ENST00000527718	OR52L2P	Q8NGH6	319 aa		5.2	□□□□□ -1.58
PABPC4-222	ENST00000527718	OR4D5	Q8NGN0	318 aa		5.2	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms