RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 RHEBQ15382 184 aa13.44□□□□□ -0.26
SNRNP35-204ENST00000527158 MORN2Q502X0 79 aa13.44□□□□□ -0.26
SNRNP35-204ENST00000527158 C4orf17Q53FE4 359 aa13.44□□□□□ -0.26
SNRNP35-204ENST00000527158 YPEL2Q96QA6 119 aa13.44□□□□□ -0.26
SNRNP35-204ENST00000527158 PSG11Q9UQ72 335 aa13.44□□□□□ -0.26
SNRNP35-204ENST00000527158 BTBD17A6NE02 478 aa13.44□□□□□ -0.26
SNRNP35-204ENST00000527158 IGHV1-69-2A0A0G2JMI3 117 aa13.43□□□□□ -0.26
SNRNP35-204ENST00000527158 KBTBD11-OT1A0A1B0GTJ5 212 aa13.43□□□□□ -0.26
SNRNP35-204ENST00000527158 ST8SIA5O15466 376 aa13.43□□□□□ -0.26
SNRNP35-204ENST00000527158 PRH1P02810 166 aa13.43□□□□□ -0.26
SNRNP35-204ENST00000527158 CGB3P0DN86 165 aa13.43□□□□□ -0.26
SNRNP35-204ENST00000527158 CGB7P0DN87 165 aa13.43□□□□□ -0.26
SNRNP35-204ENST00000527158 NDUFB7P17568 137 aa13.43□□□□□ -0.26
SNRNP35-204ENST00000527158 PPT1P50897 306 aa13.43□□□□□ -0.26
SNRNP35-204ENST00000527158 ZNF616Q08AN1 781 aa13.43□□□□□ -0.26
SNRNP35-204ENST00000527158 TMEM204Q9BSN7 226 aa13.43□□□□□ -0.26
SNRNP35-204ENST00000527158 UNKLQ9H9P5 680 aaKnown RBP13.43□□□□□ -0.26
SNRNP35-204ENST00000527158 COA4Q9NYJ1 87 aa13.43□□□□□ -0.26
SNRNP35-204ENST00000527158 CLN8Q9UBY8 286 aa13.43□□□□□ -0.26
SNRNP35-204ENST00000527158 RCL1Q9Y2P8 373 aaKnown RBP13.43□□□□□ -0.26
SNRNP35-204ENST00000527158 SLC25A6P12236 298 aa13.42□□□□□ -0.26
SNRNP35-204ENST00000527158 RPL35P42766 123 aaKnown RBP13.42□□□□□ -0.26
SNRNP35-204ENST00000527158 LOXL3P58215 753 aa13.42□□□□□ -0.26
SNRNP35-204ENST00000527158 LSM10Q969L4 123 aaKnown RBP13.42□□□□□ -0.26
SNRNP35-204ENST00000527158 AGMATQ9BSE5 352 aa13.42□□□□□ -0.26
SNRNP35-204ENST00000527158 SLC25A10Q9UBX3 287 aaPredicted RBP13.42□□□□□ -0.26
SNRNP35-204ENST00000527158 A0A1B0GU03 582 aa13.42□□□□□ -0.26
SNRNP35-204ENST00000527158 hADV38S2A0JD32 116 aa13.42□□□□□ -0.26
SNRNP35-204ENST00000527158 C9JQL5 133 aa13.42□□□□□ -0.26
SNRNP35-204ENST00000527158 PITX3O75364 302 aa13.42□□□□□ -0.26
SNRNP35-204ENST00000527158 CLDN14O95500 239 aa13.42□□□□□ -0.26
SNRNP35-204ENST00000527158 S100A8P05109 93 aa13.42□□□□□ -0.26
SNRNP35-204ENST00000527158 GNLYP22749 145 aa13.42□□□□□ -0.26
SNRNP35-204ENST00000527158 OMGP23515 440 aa13.42□□□□□ -0.26
SNRNP35-204ENST00000527158 GPR12P47775 334 aa13.42□□□□□ -0.26
SNRNP35-204ENST00000527158 C17orf58Q2M2W7 97 aa13.42□□□□□ -0.26
SNRNP35-204ENST00000527158 ZNF585BQ52M93 769 aa13.42□□□□□ -0.26
SNRNP35-204ENST00000527158 ZNF66Q6ZN08 573 aa13.42□□□□□ -0.26
SNRNP35-204ENST00000527158 OR2C3Q8N628 320 aa13.42□□□□□ -0.26
SNRNP35-204ENST00000527158 TCTEX1D1Q8N7M0 179 aa13.42□□□□□ -0.26
SNRNP35-204ENST00000527158 SFT2D1Q8WV19 159 aa13.42□□□□□ -0.26
SNRNP35-204ENST00000527158 CORO2AQ92828 525 aa13.42□□□□□ -0.26
SNRNP35-204ENST00000527158 C12orf57Q99622 126 aa13.42□□□□□ -0.26
SNRNP35-204ENST00000527158 HSD17B10Q99714 261 aaKnown RBP13.42□□□□□ -0.26
SNRNP35-204ENST00000527158 EIF5A2Q9GZV4 153 aaKnown RBP13.42□□□□□ -0.26
SNRNP35-204ENST00000527158 SLC35B3Q9H1N7 401 aa13.42□□□□□ -0.26
SNRNP35-204ENST00000527158 WFDC1Q9HC57 220 aa13.42□□□□□ -0.26
SNRNP35-204ENST00000527158 RPS10P5Q9NQ39 176 aa13.42□□□□□ -0.26
SNRNP35-204ENST00000527158 ZNF729A6NN14 1252 aaPredicted RBP13.41□□□□□ -0.26
SNRNP35-204ENST00000527158 CLDN1O95832 211 aa13.41□□□□□ -0.26
SNRNP35-204ENST00000527158 LOXP28300 417 aaPredicted RBP13.41□□□□□ -0.26
SNRNP35-204ENST00000527158 EWSR1Q01844 656 aaKnown RBP eCLIP13.41□□□□□ -0.26
SNRNP35-204ENST00000527158 BAXQ07812 192 aa13.41□□□□□ -0.26
SNRNP35-204ENST00000527158 EIF4EBP1Q13541 118 aaPredicted RBP13.41□□□□□ -0.26
SNRNP35-204ENST00000527158 TCTEX1D2Q8WW35 142 aa13.41□□□□□ -0.26
SNRNP35-204ENST00000527158 GPR146Q96CH1 333 aa13.41□□□□□ -0.26
SNRNP35-204ENST00000527158 SCRT1Q9BWW7 348 aa13.41□□□□□ -0.26
SNRNP35-204ENST00000527158 C11orf1Q9H5F2 150 aa13.41□□□□□ -0.26
SNRNP35-204ENST00000527158 COL6A6A6NMZ7 2263 aa13.41□□□□□ -0.26
SNRNP35-204ENST00000527158 ADGRG4Q8IZF6 3080 aa13.41□□□□□ -0.26
SNRNP35-204ENST00000527158 IGKV1-39P01597 117 aa13.41□□□□□ -0.26
SNRNP35-204ENST00000527158 IGKV1D-39P04432 117 aa13.41□□□□□ -0.26
SNRNP35-204ENST00000527158 EPHA1P21709 976 aa13.41□□□□□ -0.26
SNRNP35-204ENST00000527158 UQCRFS1P47985 274 aa13.41□□□□□ -0.26
SNRNP35-204ENST00000527158 MEOX2P50222 304 aa13.41□□□□□ -0.26
SNRNP35-204ENST00000527158 Q3ZCU0 254 aa13.41□□□□□ -0.26
SNRNP35-204ENST00000527158 BTNL3Q6UXE8 466 aa13.41□□□□□ -0.26
SNRNP35-204ENST00000527158 DSCAMO60469 2012 aa13.41□□□□□ -0.26
SNRNP35-204ENST00000527158 NDUFB3O43676 98 aa13.4□□□□□ -0.26
SNRNP35-204ENST00000527158 ZG16O60844 167 aa13.4□□□□□ -0.26
SNRNP35-204ENST00000527158 AGAP20933 346 aa13.4□□□□□ -0.26
SNRNP35-204ENST00000527158 RAB7AP51149 207 aa13.4□□□□□ -0.26
SNRNP35-204ENST00000527158 ID3Q02535 119 aa13.4□□□□□ -0.26
SNRNP35-204ENST00000527158 MEF2CQ06413 473 aaPredicted RBP13.4□□□□□ -0.26
SNRNP35-204ENST00000527158 TMEM30BQ3MIR4 351 aa13.4□□□□□ -0.26
SNRNP35-204ENST00000527158 AWAT1Q58HT5 328 aa13.4□□□□□ -0.26
SNRNP35-204ENST00000527158 CXorf66Q5JRM2 361 aaPredicted RBP13.4□□□□□ -0.26
SNRNP35-204ENST00000527158 GNPNAT1Q96EK6 184 aaPredicted RBP13.4□□□□□ -0.26
SNRNP35-204ENST00000527158 C5orf30Q96GV9 206 aa13.4□□□□□ -0.26
SNRNP35-204ENST00000527158 TCEAL7Q9BRU2 100 aa13.4□□□□□ -0.26
SNRNP35-204ENST00000527158 GFOD1Q9NXC2 390 aa13.4□□□□□ -0.26
SNRNP35-204ENST00000527158 ROS1P08922 2347 aa13.4□□□□□ -0.26
SNRNP35-204ENST00000527158 ITPR1Q14643 2758 aa13.4□□□□□ -0.26
SNRNP35-204ENST00000527158 C7orf77A4D0Y5 90 aa13.39□□□□□ -0.27
SNRNP35-204ENST00000527158 WRBO00258 174 aa13.39□□□□□ -0.27
SNRNP35-204ENST00000527158 ITGB1BP1O14713 200 aa13.39□□□□□ -0.27
SNRNP35-204ENST00000527158 PPOXP50336 477 aa13.39□□□□□ -0.27
SNRNP35-204ENST00000527158 POLR2GP62487 172 aaKnown RBP eCLIP13.39□□□□□ -0.27
SNRNP35-204ENST00000527158 RPL30P62888 115 aaKnown RBP13.39□□□□□ -0.27
SNRNP35-204ENST00000527158 VAMP2P63027 116 aa13.39□□□□□ -0.27
SNRNP35-204ENST00000527158 LRRC10Q5BKY1 277 aa13.39□□□□□ -0.27
SNRNP35-204ENST00000527158 HIST1H2BAQ96A08 127 aa13.39□□□□□ -0.27
SNRNP35-204ENST00000527158 IDI2-AS1Q9NZ38 188 aa13.39□□□□□ -0.27
SNRNP35-204ENST00000527158 LINC00312Q9Y6C7 94 aa13.39□□□□□ -0.27
SNRNP35-204ENST00000527158 A0A0G2JRQ6 117 aa13.39□□□□□ -0.27
SNRNP35-204ENST00000527158 S100A6P06703 90 aa13.39□□□□□ -0.27
SNRNP35-204ENST00000527158 RPL31P62899 125 aaKnown RBP13.39□□□□□ -0.27
SNRNP35-204ENST00000527158 CTAG1AP78358 180 aa13.39□□□□□ -0.27
SNRNP35-204ENST00000527158 HABP2Q14520 560 aaPredicted RBP13.39□□□□□ -0.27
SNRNP35-204ENST00000527158 DPPA3Q6W0C5 159 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms