RNA–Protein interactions for RNA: ENST00000526553.5

CD44-223, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-223ENST00000526553 GPR75O95800 540 aa2.3□□□□□ -2.04
CD44-223ENST00000526553 PDYNP01213 254 aa2.3□□□□□ -2.04
CD44-223ENST00000526553 IGHG2P01859 326 aa2.3□□□□□ -2.04
CD44-223ENST00000526553 AGTR1P30556 359 aa2.3□□□□□ -2.04
CD44-223ENST00000526553 CD79BP40259 229 aa2.3□□□□□ -2.04
CD44-223ENST00000526553 MAGOHP61326 146 aaKnown RBP2.3□□□□□ -2.04
CD44-223ENST00000526553 RBX1P62877 108 aa2.3□□□□□ -2.04
CD44-223ENST00000526553 FLI1Q01543 452 aaPredicted RBP2.3□□□□□ -2.04
CD44-223ENST00000526553 ZCWPW2Q504Y3 356 aa2.3□□□□□ -2.04
CD44-223ENST00000526553 ELP2Q6IA86 826 aa2.3□□□□□ -2.04
CD44-223ENST00000526553 DNM1P34Q6PK57 102 aa2.3□□□□□ -2.04
CD44-223ENST00000526553 PAGE2Q7Z2X7 111 aa2.3□□□□□ -2.04
CD44-223ENST00000526553 MARCH3Q86UD3 253 aa2.3□□□□□ -2.04
CD44-223ENST00000526553 ZFP82Q8N141 532 aa2.3□□□□□ -2.04
CD44-223ENST00000526553 FER1L6-AS1Q8NA97 138 aa2.3□□□□□ -2.04
CD44-223ENST00000526553 ZNF680Q8NEM1 530 aa2.3□□□□□ -2.04
CD44-223ENST00000526553 RBPMSQ93062 196 aaKnown RBP2.3□□□□□ -2.04
CD44-223ENST00000526553 TAMM41Q96BW9 452 aa2.3□□□□□ -2.04
CD44-223ENST00000526553 SMIM19Q96E16 107 aa2.3□□□□□ -2.04
CD44-223ENST00000526553 REEP6Q96HR9 211 aa2.3□□□□□ -2.04
CD44-223ENST00000526553 TRIB3Q96RU7 358 aa2.3□□□□□ -2.04
CD44-223ENST00000526553 BCL2L14Q9BZR8 327 aa2.3□□□□□ -2.04
CD44-223ENST00000526553 VSIRQ9H7M9 311 aa2.3□□□□□ -2.04
CD44-223ENST00000526553 NAGKQ9UJ70 344 aa2.3□□□□□ -2.04
CD44-223ENST00000526553 BTRCQ9Y297 605 aa2.3□□□□□ -2.04
CD44-223ENST00000526553 TP53TG1Q9Y2A0 90 aa2.3□□□□□ -2.04
CD44-223ENST00000526553 MTCH2Q9Y6C9 303 aa2.3□□□□□ -2.04
CD44-223ENST00000526553 A0A0G2JMZ2 1700 aa2.3□□□□□ -2.04
CD44-223ENST00000526553 KIAA1671Q9BY89 1806 aa2.3□□□□□ -2.04
CD44-223ENST00000526553 TET1Q8NFU7 2136 aa2.29□□□□□ -2.04
CD44-223ENST00000526553 MYH7BA7E2Y1 1941 aa2.29□□□□□ -2.04
CD44-223ENST00000526553 FOCADQ5VW36 1801 aa2.29□□□□□ -2.04
CD44-223ENST00000526553 APOEP02649 317 aa2.29□□□□□ -2.04
CD44-223ENST00000526553 KRT7P08729 469 aa2.29□□□□□ -2.04
CD44-223ENST00000526553 CD99P14209 185 aa2.29□□□□□ -2.04
CD44-223ENST00000526553 GADD45AP24522 165 aa2.29□□□□□ -2.04
CD44-223ENST00000526553 RAB2AP61019 212 aa2.29□□□□□ -2.04
CD44-223ENST00000526553 FMODQ06828 376 aa2.29□□□□□ -2.04
CD44-223ENST00000526553 FAM53BQ14153 422 aa2.29□□□□□ -2.04
CD44-223ENST00000526553 CASP8Q14790 479 aa2.29□□□□□ -2.04
CD44-223ENST00000526553 HLA-DRB5Q30154 266 aa2.29□□□□□ -2.04
CD44-223ENST00000526553 CENPWQ5EE01 88 aa2.29□□□□□ -2.04
CD44-223ENST00000526553 CCDC122Q5T0U0 273 aa2.29□□□□□ -2.04
CD44-223ENST00000526553 HENMT1Q5T8I9 393 aaKnown RBP2.29□□□□□ -2.04
CD44-223ENST00000526553 PTRHD1Q6GMV3 140 aaKnown RBP2.29□□□□□ -2.04
CD44-223ENST00000526553 SCGB1D4Q6XE38 83 aa2.29□□□□□ -2.04
CD44-223ENST00000526553 Q6ZQT7 251 aa2.29□□□□□ -2.04
CD44-223ENST00000526553 VN1R4Q7Z5H5 301 aa2.29□□□□□ -2.04
CD44-223ENST00000526553 ZBTB8OSQ8IWT0 167 aa2.29□□□□□ -2.04
CD44-223ENST00000526553 Q8N402 240 aa2.29□□□□□ -2.04
CD44-223ENST00000526553 BPIFB6Q8NFQ5 453 aa2.29□□□□□ -2.04
CD44-223ENST00000526553 OR5D18Q8NGL1 313 aa2.29□□□□□ -2.04
CD44-223ENST00000526553 OR4C13Q8NGP0 309 aa2.29□□□□□ -2.04
CD44-223ENST00000526553 OR11L1Q8NGX0 322 aa2.29□□□□□ -2.04
CD44-223ENST00000526553 GALMQ96C23 342 aa2.29□□□□□ -2.04
CD44-223ENST00000526553 TMEM208Q9BTX3 173 aa2.29□□□□□ -2.04
CD44-223ENST00000526553 CCDC94Q9BW85 323 aaPredicted RBP2.29□□□□□ -2.04
CD44-223ENST00000526553 SLC22A4Q9H015 551 aa2.29□□□□□ -2.04
CD44-223ENST00000526553 TRIM45Q9H8W5 580 aaPredicted RBP2.29□□□□□ -2.04
CD44-223ENST00000526553 TAS2R1Q9NYW7 299 aa2.29□□□□□ -2.04
CD44-223ENST00000526553 V9GYY5 206 aaPredicted RBP2.29□□□□□ -2.04
CD44-223ENST00000526553 WDFY4Q6ZS81 3184 aa2.29□□□□□ -2.04
CD44-223ENST00000526553 CACNA1BQ00975 2339 aa2.29□□□□□ -2.04
CD44-223ENST00000526553 MUC19Q7Z5P9 8384 aa2.29□□□□□ -2.04
CD44-223ENST00000526553 VWA8A3KMH1 1905 aa2.29□□□□□ -2.04
CD44-223ENST00000526553 NLRC5Q86WI3 1866 aa2.28□□□□□ -2.04
CD44-223ENST00000526553 NAV1Q8NEY1 1877 aa2.28□□□□□ -2.04
CD44-223ENST00000526553 SIPA1L1O43166 1804 aa2.28□□□□□ -2.04
CD44-223ENST00000526553 ZNF236Q9UL36 1845 aa2.28□□□□□ -2.04
CD44-223ENST00000526553 CLUHO75153 1309 aa2.28□□□□□ -2.04
CD44-223ENST00000526553 IGHV3OR15-7A0A075B7D8 119 aa2.28□□□□□ -2.04
CD44-223ENST00000526553 OR5H14A6NHG9 310 aa2.28□□□□□ -2.04
CD44-223ENST00000526553 H3BSA7 217 aa2.28□□□□□ -2.04
CD44-223ENST00000526553 SLC16A4O15374 487 aa2.28□□□□□ -2.04
CD44-223ENST00000526553 SSNA1O43805 119 aa2.28□□□□□ -2.04
CD44-223ENST00000526553 CRTAPO75718 401 aaPredicted RBP2.28□□□□□ -2.04
CD44-223ENST00000526553 AHSA1O95433 338 aa2.28□□□□□ -2.04
CD44-223ENST00000526553 PSMG1O95456 288 aa2.28□□□□□ -2.04
CD44-223ENST00000526553 FBP1P09467 338 aa2.28□□□□□ -2.04
CD44-223ENST00000526553 CYBAP13498 195 aa2.28□□□□□ -2.04
CD44-223ENST00000526553 CTSEP14091 401 aa2.28□□□□□ -2.04
CD44-223ENST00000526553 PDZD11Q5EBL8 140 aa2.28□□□□□ -2.04
CD44-223ENST00000526553 CYHR1Q6ZMK1 362 aa2.28□□□□□ -2.04
CD44-223ENST00000526553 FAM19A3Q7Z5A8 133 aa2.28□□□□□ -2.04
CD44-223ENST00000526553 NIT1Q86X76 327 aa2.28□□□□□ -2.04
CD44-223ENST00000526553 CALHM3Q86XJ0 350 aa2.28□□□□□ -2.04
CD44-223ENST00000526553 SPPL2BQ8TCT7 592 aa2.28□□□□□ -2.04
CD44-223ENST00000526553 DHRS9Q9BPW9 319 aa2.28□□□□□ -2.04
CD44-223ENST00000526553 DHCR7Q9UBM7 475 aaKnown RBP2.28□□□□□ -2.04
CD44-223ENST00000526553 GLS2Q9UI32 602 aa2.28□□□□□ -2.04
CD44-223ENST00000526553 SNX10Q9Y5X0 201 aa2.28□□□□□ -2.04
CD44-223ENST00000526553 ICOSQ9Y6W8 199 aa2.28□□□□□ -2.04
CD44-223ENST00000526553 PTPRSQ13332 1948 aa2.28□□□□□ -2.04
CD44-223ENST00000526553 MIA3Q5JRA6 1907 aa2.28□□□□□ -2.04
CD44-223ENST00000526553 LOXHD1Q8IVV2 1947 aa2.28□□□□□ -2.04
CD44-223ENST00000526553 MYH4Q9Y623 1939 aa2.28□□□□□ -2.04
CD44-223ENST00000526553 SIP14410 1827 aa2.28□□□□□ -2.04
CD44-223ENST00000526553 PARP14Q460N5 1801 aa2.28□□□□□ -2.04
CD44-223ENST00000526553 FAM186AA6NE01 2351 aa2.28□□□□□ -2.05
CD44-223ENST00000526553 CHD7Q9P2D1 2997 aa2.28□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms