RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 CCL15Q16663 113 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 TBC1D28Q2M2D7 210 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 LRRC75BQ2VPJ9 315 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 LGALSLQ3ZCW2 172 aaPredicted RBP0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 FBXL19-AS1Q494R0 122 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 TRMT12Q53H54 448 aaKnown RBP0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 BRMS1LQ5PSV4 323 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 FAM78BQ5VT40 261 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 TMEM215Q68D42 235 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 ELP2Q6IA86 826 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 WDR59Q6PJI9 974 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 CD200R1LQ6Q8B3 271 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 C4orf22Q6V702 233 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 SCGB1D4Q6XE38 83 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 TMEM144Q7Z5S9 345 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 DAZ4Q86SG3 579 aaKnown RBP0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 NIT1Q86X76 327 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 SGPP2Q8IWX5 399 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 CTAGE3PQ8IX95 158 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 SLC35G3Q8N808 338 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 ZDHHC22Q8N966 263 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 ST6GALNAC3Q8NDV1 305 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 C1orf64Q8NEQ6 169 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 OR5L1Q8NGL2 311 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 OR13D1Q8NGV5 346 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 OR2T4Q8NH00 348 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 OR1P1Q8NH06 330 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 ZNRF2Q8NHG8 242 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 PPTC7Q8NI37 304 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 SLC25A40Q8TBP6 338 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 CIRBP-AS1Q8TBR5 109 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 Q8WTZ3 238 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 RAB2BQ8WUD1 216 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 RORBQ92753 470 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 KLK6Q92876 244 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 APOBEC3DQ96AK3 386 aaPredicted RBP0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 ROPN1LQ96C74 230 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 SMIM19Q96E16 107 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 SLC25A44Q96H78 314 aaPredicted RBP0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 ACY3Q96HD9 319 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 ABHD14BQ96IU4 210 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 UBE2E2Q96LR5 201 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 CNBD2Q96M20 576 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 ZNF714Q96N38 554 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 DERL3Q96Q80 235 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 TRIB3Q96RU7 358 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 NMNAT3Q96T66 252 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 ZNF649Q9BS31 505 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 PDCD10Q9BUL8 212 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 MAP1LC3BQ9GZQ8 125 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 CHST5Q9GZS9 411 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 OR2D2Q9H210 308 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 ABCG5Q9H222 651 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 LHX5Q9H2C1 402 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 POMKQ9H5K3 350 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 PLEKHF2Q9H8W4 249 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 TPT1P8Q9HAU6 139 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 HES4Q9HCC6 221 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 DAZ1Q9NQZ3 744 aaKnown RBP0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 RBFOX1Q9NWB1 397 aaKnown RBP0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 COPZ2Q9P299 210 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 VAX2Q9UIW0 290 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 RWDD2AQ9UIY3 292 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 TRAPPC2LQ9UL33 140 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 ACOT9Q9Y305 439 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 WASHC3Q9Y3C0 194 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 UFC1Q9Y3C8 167 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 HSPB11Q9Y547 144 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 ASB4Q9Y574 426 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 PXMP4Q9Y6I8 212 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 SOGA1O94964 1423 aa0.74□□□□□ -2.29
ECHDC1-219ENST00000526299 NUP155O75694 1391 aa0.74□□□□□ -2.29
ECHDC1-219ENST00000526299 TMEM94Q12767 1356 aa0.74□□□□□ -2.29
ECHDC1-219ENST00000526299 AK9Q5TCS8 1911 aa0.74□□□□□ -2.29
ECHDC1-219ENST00000526299 NRCAMQ92823 1304 aa0.74□□□□□ -2.29
ECHDC1-219ENST00000526299 IGKV1-27A0A075B6S5 117 aa0.74□□□□□ -2.29
ECHDC1-219ENST00000526299 TRAV9-1A0A075B6T8 112 aa0.74□□□□□ -2.29
ECHDC1-219ENST00000526299 A0A087X0T9 212 aa0.74□□□□□ -2.29
ECHDC1-219ENST00000526299 TRAV8-1A0A0A6YYK1 113 aa0.74□□□□□ -2.29
ECHDC1-219ENST00000526299 CCL15-CCL14A0A0B4J2E2 113 aa0.74□□□□□ -2.29
ECHDC1-219ENST00000526299 FAM236DA0A1B0GTK5 79 aa0.74□□□□□ -2.29
ECHDC1-219ENST00000526299 IZUMO1RA6ND01 250 aa0.74□□□□□ -2.29
ECHDC1-219ENST00000526299 PRORSD1PA6NEY8 169 aa0.74□□□□□ -2.29
ECHDC1-219ENST00000526299 OR6C6A6NF89 314 aa0.74□□□□□ -2.29
ECHDC1-219ENST00000526299 OR4C46A6NHA9 309 aa0.74□□□□□ -2.29
ECHDC1-219ENST00000526299 ZNF729A6NN14 1252 aaPredicted RBP0.74□□□□□ -2.29
ECHDC1-219ENST00000526299 E7EQ34 232 aa0.74□□□□□ -2.29
ECHDC1-219ENST00000526299 PPP5D1E7EU14 171 aa0.74□□□□□ -2.29
ECHDC1-219ENST00000526299 H7C1C5 153 aa0.74□□□□□ -2.29
ECHDC1-219ENST00000526299 I3L521 148 aa0.74□□□□□ -2.29
ECHDC1-219ENST00000526299 LGALS9O00182 355 aa0.74□□□□□ -2.29
ECHDC1-219ENST00000526299 GPR31O00270 319 aa0.74□□□□□ -2.29
ECHDC1-219ENST00000526299 KPNA4O00629 521 aaPredicted RBP0.74□□□□□ -2.29
ECHDC1-219ENST00000526299 CDIPTO14735 213 aa0.74□□□□□ -2.29
ECHDC1-219ENST00000526299 GYG2O15488 501 aa0.74□□□□□ -2.29
ECHDC1-219ENST00000526299 ARPC5O15511 151 aa0.74□□□□□ -2.29
ECHDC1-219ENST00000526299 SYNGR2O43760 224 aa0.74□□□□□ -2.29
ECHDC1-219ENST00000526299 OR2B3O76000 313 aa0.74□□□□□ -2.29
ECHDC1-219ENST00000526299 CIAO1O76071 339 aa0.74□□□□□ -2.29
ECHDC1-219ENST00000526299 OR7C1O76099 320 aaPredicted RBP0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms