RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 REG1AP05451 166 aa11.85□□□□□ -0.51
LRRK1-202ENST00000525284 FAM106CPP0CH98 169 aa11.85□□□□□ -0.51
LRRK1-202ENST00000525284 HTN3P15516 51 aa11.85□□□□□ -0.51
LRRK1-202ENST00000525284 TMEM252Q8N6L7 170 aa11.85□□□□□ -0.51
LRRK1-202ENST00000525284 NHP2Q9NX24 153 aaKnown RBP11.85□□□□□ -0.51
LRRK1-202ENST00000525284 SRD5A2P31213 254 aa11.85□□□□□ -0.51
LRRK1-202ENST00000525284 RPS11P62280 158 aaKnown RBP eCLIP11.85□□□□□ -0.51
LRRK1-202ENST00000525284 CBLN3Q6UW01 205 aa11.85□□□□□ -0.51
LRRK1-202ENST00000525284 SYNGR3O43761 229 aa11.85□□□□□ -0.51
LRRK1-202ENST00000525284 CD1AP06126 327 aa11.85□□□□□ -0.51
LRRK1-202ENST00000525284 FAM106AQ4KMX7 169 aa11.85□□□□□ -0.51
LRRK1-202ENST00000525284 TMEM155Q4W5P6 130 aa11.85□□□□□ -0.51
LRRK1-202ENST00000525284 ELF5Q9UKW6 265 aaPredicted RBP11.85□□□□□ -0.51
LRRK1-202ENST00000525284 LAMB1P07942 1786 aa11.84□□□□□ -0.51
LRRK1-202ENST00000525284 TMEM229AB2RXF0 380 aa11.84□□□□□ -0.51
LRRK1-202ENST00000525284 GAPDHP04406 335 aaKnown RBP11.84□□□□□ -0.51
LRRK1-202ENST00000525284 VSIG8P0DPA2 414 aa11.84□□□□□ -0.51
LRRK1-202ENST00000525284 GPR183P32249 361 aa11.84□□□□□ -0.51
LRRK1-202ENST00000525284 SELENOTP62341 195 aa11.84□□□□□ -0.51
LRRK1-202ENST00000525284 GUSBP11Q6P575 273 aa11.84□□□□□ -0.51
LRRK1-202ENST00000525284 TRBV9A0A0B4J1U6 114 aa11.84□□□□□ -0.51
LRRK1-202ENST00000525284 OGG1O15527 345 aa11.84□□□□□ -0.51
LRRK1-202ENST00000525284 TAF15Q92804 592 aaKnown RBP eCLIP11.84□□□□□ -0.51
LRRK1-202ENST00000525284 C5orf30Q96GV9 206 aa11.84□□□□□ -0.51
LRRK1-202ENST00000525284 TRAV24A0A0B4J272 114 aa11.84□□□□□ -0.51
LRRK1-202ENST00000525284 PRSS41Q7RTY9 318 aa11.84□□□□□ -0.51
LRRK1-202ENST00000525284 CISD1Q9NZ45 108 aaKnown RBP11.84□□□□□ -0.51
LRRK1-202ENST00000525284 PPIAL4EA0A075B759 164 aa11.84□□□□□ -0.51
LRRK1-202ENST00000525284 PPIAL4DF5H284 164 aa11.84□□□□□ -0.51
LRRK1-202ENST00000525284 GHRHP01286 108 aa11.84□□□□□ -0.51
LRRK1-202ENST00000525284 PPIAL4FP0DN26 164 aa11.84□□□□□ -0.51
LRRK1-202ENST00000525284 MRAPQ8TCY5 172 aa11.84□□□□□ -0.51
LRRK1-202ENST00000525284 SPSB4Q96A44 273 aa11.84□□□□□ -0.51
LRRK1-202ENST00000525284 CCL13Q99616 98 aa11.84□□□□□ -0.51
LRRK1-202ENST00000525284 PPIAL4AQ9Y536 164 aa11.84□□□□□ -0.51
LRRK1-202ENST00000525284 GGTLC2Q14390 218 aa11.84□□□□□ -0.51
LRRK1-202ENST00000525284 TLNRD1Q9H1K6 362 aa11.84□□□□□ -0.51
LRRK1-202ENST00000525284 N4BP2Q86UW6 1770 aaPredicted RBP11.84□□□□□ -0.51
LRRK1-202ENST00000525284 PLA2G10O15496 165 aa11.83□□□□□ -0.51
LRRK1-202ENST00000525284 C1orf185Q5T7R7 199 aa11.83□□□□□ -0.51
LRRK1-202ENST00000525284 VKORC1L1Q8N0U8 176 aa11.83□□□□□ -0.51
LRRK1-202ENST00000525284 TDGF1P3P51864 188 aa11.83□□□□□ -0.52
LRRK1-202ENST00000525284 RND3P61587 244 aa11.83□□□□□ -0.52
LRRK1-202ENST00000525284 IL11RAQ14626 422 aa11.83□□□□□ -0.52
LRRK1-202ENST00000525284 TXNDC17Q9BRA2 123 aa11.83□□□□□ -0.52
LRRK1-202ENST00000525284 MS4A5Q9H3V2 200 aa11.83□□□□□ -0.52
LRRK1-202ENST00000525284 IGHV3-35A0A0C4DH35 117 aa11.83□□□□□ -0.52
LRRK1-202ENST00000525284 HOGA1Q86XE5 327 aa11.83□□□□□ -0.52
LRRK1-202ENST00000525284 OR4D11Q8NGI4 311 aa11.83□□□□□ -0.52
LRRK1-202ENST00000525284 MAFAQ8NHW3 353 aaPredicted RBP11.83□□□□□ -0.52
LRRK1-202ENST00000525284 C10orf35Q96D05 121 aa11.83□□□□□ -0.52
LRRK1-202ENST00000525284 C8orf88P0DMB2 117 aa11.83□□□□□ -0.52
LRRK1-202ENST00000525284 MAGEA5P43359 124 aa11.83□□□□□ -0.52
LRRK1-202ENST00000525284 LINC00596Q86U02 117 aa11.83□□□□□ -0.52
LRRK1-202ENST00000525284 SH3BGRL3Q9H299 93 aa11.83□□□□□ -0.52
LRRK1-202ENST00000525284 RPL8P62917 257 aaKnown RBP11.83□□□□□ -0.52
LRRK1-202ENST00000525284 LY6EQ16553 131 aa11.83□□□□□ -0.52
LRRK1-202ENST00000525284 FAM89BQ8N5H3 189 aa11.83□□□□□ -0.52
LRRK1-202ENST00000525284 ZNF107Q9UII5 783 aaPredicted RBP11.83□□□□□ -0.52
LRRK1-202ENST00000525284 SF3B6Q9Y3B4 125 aaKnown RBP11.83□□□□□ -0.52
LRRK1-202ENST00000525284 DDX60LQ5H9U9 1706 aaKnown RBP11.83□□□□□ -0.52
LRRK1-202ENST00000525284 IGHV3OR16-13A0A075B7E8 117 aa11.82□□□□□ -0.52
LRRK1-202ENST00000525284 IGHV3-74A0A0B4J1X5 117 aa11.82□□□□□ -0.52
LRRK1-202ENST00000525284 ZFAND6Q6FIF0 208 aa11.82□□□□□ -0.52
LRRK1-202ENST00000525284 PHF7Q9BWX1 381 aaPredicted RBP11.82□□□□□ -0.52
LRRK1-202ENST00000525284 SLC25A2Q9BXI2 301 aa11.82□□□□□ -0.52
LRRK1-202ENST00000525284 MRPL20Q9BYC9 149 aaKnown RBP11.82□□□□□ -0.52
LRRK1-202ENST00000525284 PGPEP1LA6NFU8 196 aa11.82□□□□□ -0.52
LRRK1-202ENST00000525284 ATP5G2Q06055 141 aa11.82□□□□□ -0.52
LRRK1-202ENST00000525284 C7orf66A4D0T2 115 aa11.82□□□□□ -0.52
LRRK1-202ENST00000525284 GGTLC3B5MD39 225 aa11.82□□□□□ -0.52
LRRK1-202ENST00000525284 IGHV3-48P01763 117 aa11.82□□□□□ -0.52
LRRK1-202ENST00000525284 NMBP08949 121 aa11.82□□□□□ -0.52
LRRK1-202ENST00000525284 EGR1P18146 543 aa11.82□□□□□ -0.52
LRRK1-202ENST00000525284 GAGE2BQ13066 116 aa11.82□□□□□ -0.52
LRRK1-202ENST00000525284 GAGE2EQ4V326 116 aa11.82□□□□□ -0.52
LRRK1-202ENST00000525284 C1QL3Q5VWW1 255 aa11.82□□□□□ -0.52
LRRK1-202ENST00000525284 IMMP2LQ96T52 175 aa11.82□□□□□ -0.52
LRRK1-202ENST00000525284 GAGE2DQ9UEU5 116 aa11.82□□□□□ -0.52
LRRK1-202ENST00000525284 MAST2Q6P0Q8 1798 aa11.82□□□□□ -0.52
LRRK1-202ENST00000525284 ATP5LO75964 103 aa11.82□□□□□ -0.52
LRRK1-202ENST00000525284 SNRPD3P62318 126 aaKnown RBP11.82□□□□□ -0.52
LRRK1-202ENST00000525284 UNC119Q13432 240 aa11.82□□□□□ -0.52
LRRK1-202ENST00000525284 CXorf66Q5JRM2 361 aaPredicted RBP11.82□□□□□ -0.52
LRRK1-202ENST00000525284 TRAV2A0A0B4J234 112 aa11.82□□□□□ -0.52
LRRK1-202ENST00000525284 IGHV3-66A0A0C4DH42 116 aa11.82□□□□□ -0.52
LRRK1-202ENST00000525284 LILRA5A6NI73 299 aa11.82□□□□□ -0.52
LRRK1-202ENST00000525284 GLIPR1P48060 266 aa11.82□□□□□ -0.52
LRRK1-202ENST00000525284 CCL8P80075 99 aa11.82□□□□□ -0.52
LRRK1-202ENST00000525284 GFI1BQ5VTD9 330 aa11.82□□□□□ -0.52
LRRK1-202ENST00000525284 HIST1H2BAQ96A08 127 aa11.82□□□□□ -0.52
LRRK1-202ENST00000525284 PDFQ9HBH1 243 aa11.82□□□□□ -0.52
LRRK1-202ENST00000525284 IGHV5-51A0A0C4DH38 117 aa11.81□□□□□ -0.52
LRRK1-202ENST00000525284 PRR35P0CG20 571 aa11.81□□□□□ -0.52
LRRK1-202ENST00000525284 HMGA1P17096 107 aaKnown RBP11.81□□□□□ -0.52
LRRK1-202ENST00000525284 TGIF1Q15583 401 aa11.81□□□□□ -0.52
LRRK1-202ENST00000525284 LDLRAD2Q5SZI1 272 aa11.81□□□□□ -0.52
LRRK1-202ENST00000525284 ZNF784Q8NCA9 323 aaPredicted RBP11.81□□□□□ -0.52
LRRK1-202ENST00000525284 DSPPQ9NZW4 1301 aa11.81□□□□□ -0.52
LRRK1-202ENST00000525284 LMO7DNF2Z398 122 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms