RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 LCN12Q6JVE5 192 aa18.23■□□□□ 0.51
USP47-205ENST00000525257 DHRSXQ8N5I4 330 aa18.23■□□□□ 0.51
USP47-205ENST00000525257 NANOGP1Q8N7R0 232 aa18.23■□□□□ 0.51
USP47-205ENST00000525257 PHYHIPQ92561 330 aa18.23■□□□□ 0.51
USP47-205ENST00000525257 LPAR5Q9H1C0 372 aa18.23■□□□□ 0.51
USP47-205ENST00000525257 SLC35D1Q9NTN3 355 aa18.23■□□□□ 0.51
USP47-205ENST00000525257 PEF1Q9UBV8 284 aaKnown RBP18.23■□□□□ 0.51
USP47-205ENST00000525257 ALMS1Q8TCU4 4167 aa18.23■□□□□ 0.51
USP47-205ENST00000525257 IZUMO1RA6ND01 250 aa18.22■□□□□ 0.51
USP47-205ENST00000525257 M0R1X1 148 aa18.22■□□□□ 0.51
USP47-205ENST00000525257 BPNT1O95861 308 aa18.22■□□□□ 0.51
USP47-205ENST00000525257 TINAGL1Q9GZM7 467 aaPredicted RBP18.22■□□□□ 0.51
USP47-205ENST00000525257 Q9N2K0 584 aa18.22■□□□□ 0.51
USP47-205ENST00000525257 MGAT4AQ9UM21 535 aa18.22■□□□□ 0.51
USP47-205ENST00000525257 IGKV1-6A0A0C4DH72 117 aa18.21■□□□□ 0.51
USP47-205ENST00000525257 JTBO76095 146 aa18.21■□□□□ 0.51
USP47-205ENST00000525257 IGLV2-23P01705 113 aa18.21■□□□□ 0.51
USP47-205ENST00000525257 CSN3P07498 182 aa18.21■□□□□ 0.51
USP47-205ENST00000525257 GNAO1P09471 354 aa18.21■□□□□ 0.51
USP47-205ENST00000525257 AADACP22760 399 aa18.21■□□□□ 0.51
USP47-205ENST00000525257 Q8N402 240 aa18.21■□□□□ 0.51
USP47-205ENST00000525257 MS4A15Q8N5U1 240 aa18.21■□□□□ 0.51
USP47-205ENST00000525257 BVESQ8NE79 360 aa18.21■□□□□ 0.51
USP47-205ENST00000525257 BPIFB6Q8NFQ5 453 aa18.21■□□□□ 0.51
USP47-205ENST00000525257 C12orf4Q9NQ89 552 aa18.21■□□□□ 0.51
USP47-205ENST00000525257 COA4Q9NYJ1 87 aa18.21■□□□□ 0.51
USP47-205ENST00000525257 RDH8Q9NYR8 311 aa18.21■□□□□ 0.51
USP47-205ENST00000525257 APELAP0DMC3 54 aa18.2■□□□□ 0.5
USP47-205ENST00000525257 SRMP19623 302 aa18.2■□□□□ 0.5
USP47-205ENST00000525257 DYRK1AQ13627 763 aa18.2■□□□□ 0.5
USP47-205ENST00000525257 P2RY14Q15391 338 aa18.2■□□□□ 0.5
USP47-205ENST00000525257 HSD17B12Q53GQ0 312 aa18.2■□□□□ 0.5
USP47-205ENST00000525257 ZNF343Q6P1L6 599 aa18.2■□□□□ 0.5
USP47-205ENST00000525257 CEACAM19Q7Z692 300 aa18.2■□□□□ 0.5
USP47-205ENST00000525257 OR6M1Q8NGM8 313 aa18.2■□□□□ 0.5
USP47-205ENST00000525257 FAM110AQ9BQ89 295 aa18.2■□□□□ 0.5
USP47-205ENST00000525257 URM1Q9BTM9 101 aaKnown RBP18.2■□□□□ 0.5
USP47-205ENST00000525257 CRYGBP07316 175 aa18.19■□□□□ 0.5
USP47-205ENST00000525257 LGALS7P47929 136 aa18.19■□□□□ 0.5
USP47-205ENST00000525257 TATDN3Q17R31 274 aa18.19■□□□□ 0.5
USP47-205ENST00000525257 RPEL1Q2QD12 228 aa18.19■□□□□ 0.5
USP47-205ENST00000525257 C8orf59Q8N0T1 100 aaPredicted RBP18.19■□□□□ 0.5
USP47-205ENST00000525257 HARBI1Q96MB7 349 aa18.19■□□□□ 0.5
USP47-205ENST00000525257 TMEM68Q96MH6 324 aa18.19■□□□□ 0.5
USP47-205ENST00000525257 PLEKHA3Q9HB20 300 aa18.19■□□□□ 0.5
USP47-205ENST00000525257 FAM89BQ8N5H3 189 aa18.18■□□□□ 0.5
USP47-205ENST00000525257 ARHGAP5-AS1Q96IT6 56 aa18.18■□□□□ 0.5
USP47-205ENST00000525257 PHB2Q99623 299 aa18.18■□□□□ 0.5
USP47-205ENST00000525257 CMSS1Q9BQ75 279 aaKnown RBP18.18■□□□□ 0.5
USP47-205ENST00000525257 PLCXD1Q9NUJ7 323 aa18.18■□□□□ 0.5
USP47-205ENST00000525257 SIGLEC8Q9NYZ4 499 aa18.18■□□□□ 0.5
USP47-205ENST00000525257 HSF4Q9ULV5 492 aa18.18■□□□□ 0.5
USP47-205ENST00000525257 CEPT1Q9Y6K0 416 aa18.18■□□□□ 0.5
USP47-205ENST00000525257 SHISA3A0PJX4 238 aa18.17■□□□□ 0.5
USP47-205ENST00000525257 FOXI3A8MTJ6 420 aaPredicted RBP18.17■□□□□ 0.5
USP47-205ENST00000525257 RBMXL2O75526 392 aaKnown RBP18.17■□□□□ 0.5
USP47-205ENST00000525257 BRI3O95415 125 aa18.17■□□□□ 0.5
USP47-205ENST00000525257 CD37P11049 281 aa18.17■□□□□ 0.5
USP47-205ENST00000525257 TMEM50BP56557 158 aa18.17■□□□□ 0.5
USP47-205ENST00000525257 PACRGLQ8N7B6 248 aa18.17■□□□□ 0.5
USP47-205ENST00000525257 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.17■□□□□ 0.5
USP47-205ENST00000525257 USMG5Q96IX5 58 aa18.17■□□□□ 0.5
USP47-205ENST00000525257 PECRQ9BY49 303 aa18.17■□□□□ 0.5
USP47-205ENST00000525257 OR2D2Q9H210 308 aa18.17■□□□□ 0.5
USP47-205ENST00000525257 HIPK2Q9H2X6 1198 aa18.17■□□□□ 0.5
USP47-205ENST00000525257 PLGRKTQ9HBL7 147 aa18.17■□□□□ 0.5
USP47-205ENST00000525257 FKBP14Q9NWM8 211 aa18.17■□□□□ 0.5
USP47-205ENST00000525257 TRDCB7Z8K6 153 aa18.16■□□□□ 0.5
USP47-205ENST00000525257 OR2A4O95047 310 aa18.16■□□□□ 0.5
USP47-205ENST00000525257 CD81P60033 236 aa18.16■□□□□ 0.5
USP47-205ENST00000525257 MND1Q9BWT6 205 aa18.16■□□□□ 0.5
USP47-205ENST00000525257 NKX1-2Q9UD57 310 aaPredicted RBP18.16■□□□□ 0.5
USP47-205ENST00000525257 SHOXO15266 292 aa18.15■□□□□ 0.5
USP47-205ENST00000525257 CD3GP09693 182 aa18.15■□□□□ 0.5
USP47-205ENST00000525257 UCHL1P09936 223 aa18.15■□□□□ 0.5
USP47-205ENST00000525257 FBLIM1Q8WUP2 373 aa18.15■□□□□ 0.5
USP47-205ENST00000525257 SNAPC3Q92966 411 aa18.15■□□□□ 0.5
USP47-205ENST00000525257 GFI1Q99684 422 aa18.15■□□□□ 0.5
USP47-205ENST00000525257 C8orf4Q9NR00 106 aa18.15■□□□□ 0.5
USP47-205ENST00000525257 SDHAF2Q9NX18 166 aa18.15■□□□□ 0.5
USP47-205ENST00000525257 PEMTQ9UBM1 199 aa18.15■□□□□ 0.5
USP47-205ENST00000525257 A0A0B4J203 849 aa18.14■□□□□ 0.49
USP47-205ENST00000525257 MSGN1A6NI15 193 aa18.14■□□□□ 0.49
USP47-205ENST00000525257 SRRM4A7MD48 611 aaKnown RBP18.14■□□□□ 0.49
USP47-205ENST00000525257 BET1O15155 118 aa18.14■□□□□ 0.49
USP47-205ENST00000525257 CBX3Q13185 183 aa18.14■□□□□ 0.49
USP47-205ENST00000525257 LINC00322Q6ZN03 302 aaPredicted RBP18.14■□□□□ 0.49
USP47-205ENST00000525257 ADAD2Q8NCV1 583 aaKnown RBP18.14■□□□□ 0.49
USP47-205ENST00000525257 IL17DQ8TAD2 202 aa18.14■□□□□ 0.49
USP47-205ENST00000525257 C5orf30Q96GV9 206 aa18.14■□□□□ 0.49
USP47-205ENST00000525257 SLC17A2O00624 439 aa18.13■□□□□ 0.49
USP47-205ENST00000525257 TPPPO94811 219 aa18.13■□□□□ 0.49
USP47-205ENST00000525257 MECP2P51608 486 aaKnown RBP18.13■□□□□ 0.49
USP47-205ENST00000525257 MRGPRG-AS1Q2M3A8 158 aa18.13■□□□□ 0.49
USP47-205ENST00000525257 TMEM177Q53S58 311 aa18.13■□□□□ 0.49
USP47-205ENST00000525257 PLAC9Q5JTB6 97 aa18.13■□□□□ 0.49
USP47-205ENST00000525257 OR4A4PQ8NGN8 299 aa18.13■□□□□ 0.49
USP47-205ENST00000525257 OR2K2Q8NGT1 345 aa18.13■□□□□ 0.49
USP47-205ENST00000525257 NEURL2Q9BR09 285 aa18.13■□□□□ 0.49
USP47-205ENST00000525257 AK6Q9Y3D8 172 aaKnown RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms