RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 SCGB1D4Q6XE38 83 aa1.14□□□□□ -2.23
CD44-215ENST00000525241 SLC13A5Q86YT5 568 aaPredicted RBP1.14□□□□□ -2.23
CD44-215ENST00000525241 CD302Q8IX05 232 aa1.14□□□□□ -2.23
CD44-215ENST00000525241 OR11H2Q8NH07 326 aa1.14□□□□□ -2.23
CD44-215ENST00000525241 OR5AK3PQ8NH89 298 aa1.14□□□□□ -2.23
CD44-215ENST00000525241 DNAJB3Q8WWF6 145 aa1.14□□□□□ -2.23
CD44-215ENST00000525241 MIEN1Q9BRT3 115 aa1.14□□□□□ -2.23
CD44-215ENST00000525241 MED10Q9BTT4 135 aa1.14□□□□□ -2.23
CD44-215ENST00000525241 NOSIPQ9Y314 301 aaKnown RBP1.14□□□□□ -2.23
CD44-215ENST00000525241 BPTFQ12830 3046 aa1.14□□□□□ -2.23
CD44-215ENST00000525241 THSD7AQ9UPZ6 1657 aa1.13□□□□□ -2.23
CD44-215ENST00000525241 NUMA1Q14980 2115 aa1.13□□□□□ -2.23
CD44-215ENST00000525241 VWFP04275 2813 aa1.13□□□□□ -2.23
CD44-215ENST00000525241 BDP1A6H8Y1 2624 aa1.13□□□□□ -2.23
CD44-215ENST00000525241 FASNP49327 2511 aaKnown RBP1.13□□□□□ -2.23
CD44-215ENST00000525241 FABP12A6NFH5 140 aa1.13□□□□□ -2.23
CD44-215ENST00000525241 CALUO43852 315 aaPredicted RBP1.13□□□□□ -2.23
CD44-215ENST00000525241 PSMG1O95456 288 aa1.13□□□□□ -2.23
CD44-215ENST00000525241 IGHV1-69P01742 117 aa1.13□□□□□ -2.23
CD44-215ENST00000525241 ORM1P02763 201 aa1.13□□□□□ -2.23
CD44-215ENST00000525241 TAS2R45P59539 299 aa1.13□□□□□ -2.23
CD44-215ENST00000525241 UBE2G2P60604 165 aa1.13□□□□□ -2.23
CD44-215ENST00000525241 MGAT3Q09327 533 aa1.13□□□□□ -2.23
CD44-215ENST00000525241 ZNHIT3Q15649 155 aaPredicted RBP1.13□□□□□ -2.23
CD44-215ENST00000525241 C4orf26Q17RF5 130 aa1.13□□□□□ -2.23
CD44-215ENST00000525241 TMEM31Q5JXX7 168 aa1.13□□□□□ -2.23
CD44-215ENST00000525241 FAM45BPQ6NSW5 357 aa1.13□□□□□ -2.23
CD44-215ENST00000525241 COA5Q86WW8 74 aa1.13□□□□□ -2.23
CD44-215ENST00000525241 TMEM156Q8N614 296 aa1.13□□□□□ -2.23
CD44-215ENST00000525241 NATD1Q8N6N6 113 aa1.13□□□□□ -2.23
CD44-215ENST00000525241 CNEP1R1Q8N9A8 125 aa1.13□□□□□ -2.23
CD44-215ENST00000525241 OR5L1Q8NGL2 311 aa1.13□□□□□ -2.23
CD44-215ENST00000525241 LHFPL5Q8TAF8 219 aa1.13□□□□□ -2.23
CD44-215ENST00000525241 SPZ1Q9BXG8 430 aa1.13□□□□□ -2.23
CD44-215ENST00000525241 CHMP4BQ9H444 224 aaKnown RBP1.13□□□□□ -2.23
CD44-215ENST00000525241 DOK5Q9P104 306 aa1.13□□□□□ -2.23
CD44-215ENST00000525241 TP53TG1Q9Y2A0 90 aa1.13□□□□□ -2.23
CD44-215ENST00000525241 NOTCH1P46531 2555 aa1.13□□□□□ -2.23
CD44-215ENST00000525241 ZNF532Q9HCE3 1301 aa1.13□□□□□ -2.23
CD44-215ENST00000525241 SLX4Q8IY92 1834 aa1.12□□□□□ -2.23
CD44-215ENST00000525241 CACNA1BQ00975 2339 aa1.12□□□□□ -2.23
CD44-215ENST00000525241 ABCA12Q86UK0 2595 aa1.12□□□□□ -2.23
CD44-215ENST00000525241 SCN9AQ15858 1988 aa1.12□□□□□ -2.23
CD44-215ENST00000525241 TNRC18O15417 2968 aaPredicted RBP1.12□□□□□ -2.23
CD44-215ENST00000525241 TMSB15BA0A087X1C1 80 aa1.12□□□□□ -2.23
CD44-215ENST00000525241 A8MUN3 132 aa1.12□□□□□ -2.23
CD44-215ENST00000525241 ZNF705FA8MVS1 300 aaPredicted RBP1.12□□□□□ -2.23
CD44-215ENST00000525241 FTCDNL1E5RQL4 147 aa1.12□□□□□ -2.23
CD44-215ENST00000525241 CETN3O15182 167 aa1.12□□□□□ -2.23
CD44-215ENST00000525241 COCHO43405 550 aa1.12□□□□□ -2.23
CD44-215ENST00000525241 ADAP1O75689 374 aa1.12□□□□□ -2.23
CD44-215ENST00000525241 HBZP02008 142 aa1.12□□□□□ -2.23
CD44-215ENST00000525241 CRYBA1P05813 215 aa1.12□□□□□ -2.23
CD44-215ENST00000525241 LYNX1P0DP58 116 aa1.12□□□□□ -2.23
CD44-215ENST00000525241 DAD1P61803 113 aa1.12□□□□□ -2.23
CD44-215ENST00000525241 HERVK_113P63121 156 aa1.12□□□□□ -2.23
CD44-215ENST00000525241 ANGPT1Q15389 498 aa1.12□□□□□ -2.23
CD44-215ENST00000525241 FAM201AQ5SY85 155 aa1.12□□□□□ -2.23
CD44-215ENST00000525241 AMTNQ6UX39 209 aa1.12□□□□□ -2.23
CD44-215ENST00000525241 CRLF3Q8IUI8 442 aa1.12□□□□□ -2.23
CD44-215ENST00000525241 BLIDQ8IZY5 108 aa1.12□□□□□ -2.23
CD44-215ENST00000525241 RIBC1Q8N443 379 aaPredicted RBP1.12□□□□□ -2.23
CD44-215ENST00000525241 LRRC45Q96CN5 670 aa1.12□□□□□ -2.23
CD44-215ENST00000525241 SMIM12Q96EX1 92 aa1.12□□□□□ -2.23
CD44-215ENST00000525241 OR7D2Q96RA2 312 aa1.12□□□□□ -2.23
CD44-215ENST00000525241 NAA38Q9BRA0 125 aaKnown RBP1.12□□□□□ -2.23
CD44-215ENST00000525241 NKX6-2Q9C056 277 aaPredicted RBP1.12□□□□□ -2.23
CD44-215ENST00000525241 C15orf41Q9Y2V0 281 aa1.12□□□□□ -2.23
CD44-215ENST00000525241 NPATQ14207 1427 aa1.12□□□□□ -2.23
CD44-215ENST00000525241 COL6A5A8TX70 2615 aa1.12□□□□□ -2.23
CD44-215ENST00000525241 WDR90Q96KV7 1748 aa1.12□□□□□ -2.23
CD44-215ENST00000525241 MAP3K5Q99683 1374 aa1.11□□□□□ -2.23
CD44-215ENST00000525241 SDK1Q7Z5N4 2213 aa1.11□□□□□ -2.23
CD44-215ENST00000525241 MRASO14807 208 aa1.11□□□□□ -2.23
CD44-215ENST00000525241 PVALBP20472 110 aaPredicted RBP1.11□□□□□ -2.23
CD44-215ENST00000525241 OR10J1P30954 320 aa1.11□□□□□ -2.23
CD44-215ENST00000525241 CLDN12P56749 244 aa1.11□□□□□ -2.23
CD44-215ENST00000525241 SKP1P63208 163 aa1.11□□□□□ -2.23
CD44-215ENST00000525241 ERHP84090 104 aaKnown RBP1.11□□□□□ -2.23
CD44-215ENST00000525241 PABPC1L2AQ5JQF8 200 aa1.11□□□□□ -2.23
CD44-215ENST00000525241 DRAM2Q6UX65 266 aa1.11□□□□□ -2.23
CD44-215ENST00000525241 ATP5L2Q7Z4Y8 100 aa1.11□□□□□ -2.23
CD44-215ENST00000525241 LHFPL1Q86WI0 220 aa1.11□□□□□ -2.23
CD44-215ENST00000525241 IQCF2Q8IXL9 164 aa1.11□□□□□ -2.23
CD44-215ENST00000525241 C10orf126Q8N4M7 172 aa1.11□□□□□ -2.23
CD44-215ENST00000525241 LFNGQ8NES3 379 aa1.11□□□□□ -2.23
CD44-215ENST00000525241 OR2D3Q8NGH3 330 aa1.11□□□□□ -2.23
CD44-215ENST00000525241 OR52E4Q8NGH9 312 aa1.11□□□□□ -2.23
CD44-215ENST00000525241 CLDND2Q8NHS1 167 aa1.11□□□□□ -2.23
CD44-215ENST00000525241 SLC35G5Q96KT7 338 aa1.11□□□□□ -2.23
CD44-215ENST00000525241 TMEM208Q9BTX3 173 aa1.11□□□□□ -2.23
CD44-215ENST00000525241 UPF3BQ9BZI7 483 aaKnown RBP1.11□□□□□ -2.23
CD44-215ENST00000525241 EIF5A2Q9GZV4 153 aaKnown RBP1.11□□□□□ -2.23
CD44-215ENST00000525241 SLC2A9Q9NRM0 540 aa1.11□□□□□ -2.23
CD44-215ENST00000525241 REREQ9P2R6 1566 aa1.11□□□□□ -2.23
CD44-215ENST00000525241 ANKHD1Q8IWZ3 2542 aaKnown RBP1.11□□□□□ -2.23
CD44-215ENST00000525241 MALRD1Q5VYJ5 2156 aa1.1□□□□□ -2.23
CD44-215ENST00000525241 NCOR2Q9Y618 2525 aa1.1□□□□□ -2.23
CD44-215ENST00000525241 FN1P02751 2386 aaKnown RBP1.1□□□□□ -2.23
CD44-215ENST00000525241 TRAV41A0A0B4J266 112 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms