RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	KIR2DS1	A0A191URI9	304 aa		6.58	□□□□□ -1.36
SPIDR-223	ENST00000524033	FAM90A27P	A6NNH2	459 aa		6.58	□□□□□ -1.36
SPIDR-223	ENST00000524033	AQP7	O14520	342 aa		6.58	□□□□□ -1.36
SPIDR-223	ENST00000524033	CHST1	O43916	411 aa		6.58	□□□□□ -1.36
SPIDR-223	ENST00000524033	CYTIP	O60759	359 aa		6.58	□□□□□ -1.36
SPIDR-223	ENST00000524033	PGLYRP1	O75594	196 aa	Predicted RBP	6.58	□□□□□ -1.36
SPIDR-223	ENST00000524033	CST7	O76096	145 aa		6.58	□□□□□ -1.36
SPIDR-223	ENST00000524033	OR7C1	O76099	320 aa	Predicted RBP	6.58	□□□□□ -1.36
SPIDR-223	ENST00000524033	IGKV1-39	P01597	117 aa		6.58	□□□□□ -1.36
SPIDR-223	ENST00000524033	TRGC2	P03986	189 aa		6.58	□□□□□ -1.36
SPIDR-223	ENST00000524033	TK1	P04183	234 aa		6.58	□□□□□ -1.36
SPIDR-223	ENST00000524033	IGKV1D-39	P04432	117 aa		6.58	□□□□□ -1.36
SPIDR-223	ENST00000524033	RFPL3S	P0C7P2	107 aa		6.58	□□□□□ -1.36
SPIDR-223	ENST00000524033	TRGC1	P0CF51	173 aa		6.58	□□□□□ -1.36
SPIDR-223	ENST00000524033	B4GALT1	P15291	398 aa		6.58	□□□□□ -1.36
SPIDR-223	ENST00000524033	IGFBP2	P18065	325 aa		6.58	□□□□□ -1.36
SPIDR-223	ENST00000524033	F2R	P25116	425 aa		6.58	□□□□□ -1.36
SPIDR-223	ENST00000524033	CD200	P41217	278 aa		6.58	□□□□□ -1.36
SPIDR-223	ENST00000524033	KIR2DS4	P43632	304 aa		6.58	□□□□□ -1.36
SPIDR-223	ENST00000524033	HAAO	P46952	286 aa		6.58	□□□□□ -1.36
SPIDR-223	ENST00000524033	RPL23A	P62750	156 aa	Known RBP	6.58	□□□□□ -1.36
SPIDR-223	ENST00000524033	SUMO1	P63165	101 aa	Known RBP	6.58	□□□□□ -1.36
SPIDR-223	ENST00000524033	TFF3	Q07654	80 aa		6.58	□□□□□ -1.36
SPIDR-223	ENST00000524033	KIR2DS1	Q14954	304 aa		6.58	□□□□□ -1.36
SPIDR-223	ENST00000524033	COA6	Q5JTJ3	125 aa	Known RBP	6.58	□□□□□ -1.36
SPIDR-223	ENST00000524033	GFI1B	Q5VTD9	330 aa		6.58	□□□□□ -1.36
SPIDR-223	ENST00000524033	SSX7	Q7RTT5	188 aa		6.58	□□□□□ -1.36
SPIDR-223	ENST00000524033	C1orf87	Q8N0U7	546 aa		6.58	□□□□□ -1.36
SPIDR-223	ENST00000524033	OR56B2P	Q8NGI1	322 aa		6.58	□□□□□ -1.36
SPIDR-223	ENST00000524033	OR10D4P	Q8NGN7	298 aa		6.58	□□□□□ -1.36
SPIDR-223	ENST00000524033	RNASEH2C	Q8TDP1	164 aa	Known RBP	6.58	□□□□□ -1.36
SPIDR-223	ENST00000524033	PIGC	Q92535	297 aa		6.58	□□□□□ -1.36
SPIDR-223	ENST00000524033	SARAF	Q96BY9	339 aa		6.58	□□□□□ -1.36
SPIDR-223	ENST00000524033	JSRP1	Q96MG2	331 aa	Predicted RBP	6.58	□□□□□ -1.36
SPIDR-223	ENST00000524033	ALKBH3	Q96Q83	286 aa	Predicted RBP	6.58	□□□□□ -1.36
SPIDR-223	ENST00000524033	RAB40C	Q96S21	281 aa		6.58	□□□□□ -1.36
SPIDR-223	ENST00000524033	CTDSP1	Q9GZU7	261 aa		6.58	□□□□□ -1.36
SPIDR-223	ENST00000524033	CRLF2	Q9HC73	371 aa		6.58	□□□□□ -1.36
SPIDR-223	ENST00000524033	CCL28	Q9NRJ3	127 aa		6.58	□□□□□ -1.36
SPIDR-223	ENST00000524033	BOK	Q9UMX3	212 aa	Predicted RBP	6.58	□□□□□ -1.36
SPIDR-223	ENST00000524033	TEP1	Q99973	2627 aa	Known RBP	6.58	□□□□□ -1.36
SPIDR-223	ENST00000524033	IGKV3D-15	A0A087WSY6	115 aa		6.57	□□□□□ -1.36
SPIDR-223	ENST00000524033		A0A0G2JNJ9	132 aa		6.57	□□□□□ -1.36
SPIDR-223	ENST00000524033	OR5H1	A6NKK0	313 aa		6.57	□□□□□ -1.36
SPIDR-223	ENST00000524033	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	6.57	□□□□□ -1.36
SPIDR-223	ENST00000524033	CLDN34	H7C241	214 aa		6.57	□□□□□ -1.36
SPIDR-223	ENST00000524033	PPP1R2P9	O14990	202 aa		6.57	□□□□□ -1.36
SPIDR-223	ENST00000524033	DEGS1	O15121	323 aa		6.57	□□□□□ -1.36
SPIDR-223	ENST00000524033	CXCL13	O43927	109 aa		6.57	□□□□□ -1.36
SPIDR-223	ENST00000524033	WDR1	O75083	606 aa		6.57	□□□□□ -1.36
SPIDR-223	ENST00000524033	OPN1MW	P04001	364 aa		6.57	□□□□□ -1.36
SPIDR-223	ENST00000524033	PFN1	P07737	140 aa	Known RBP	6.57	□□□□□ -1.36
SPIDR-223	ENST00000524033	PATE4	P0C8F1	98 aa		6.57	□□□□□ -1.36
SPIDR-223	ENST00000524033	OPN1MW2	P0DN77	364 aa		6.57	□□□□□ -1.36
SPIDR-223	ENST00000524033	OPN1MW3	P0DN78	364 aa		6.57	□□□□□ -1.36
SPIDR-223	ENST00000524033	OMG	P23515	440 aa		6.57	□□□□□ -1.36
SPIDR-223	ENST00000524033	CEACAM6	P40199	344 aa		6.57	□□□□□ -1.36
SPIDR-223	ENST00000524033	SST	P61278	116 aa		6.57	□□□□□ -1.36
SPIDR-223	ENST00000524033	PKIA	P61925	76 aa		6.57	□□□□□ -1.36
SPIDR-223	ENST00000524033	NKX6-1	P78426	367 aa	Predicted RBP	6.57	□□□□□ -1.36
SPIDR-223	ENST00000524033	ARL16	Q0P5N6	197 aa		6.57	□□□□□ -1.36
SPIDR-223	ENST00000524033	PRDX4	Q13162	271 aa		6.57	□□□□□ -1.36
SPIDR-223	ENST00000524033	LRRC75B	Q2VPJ9	315 aa		6.57	□□□□□ -1.36
SPIDR-223	ENST00000524033	WDR25	Q64LD2	544 aa	Predicted RBP	6.57	□□□□□ -1.36
SPIDR-223	ENST00000524033	CPEB3	Q8NE35	698 aa	Known RBP	6.57	□□□□□ -1.36
SPIDR-223	ENST00000524033	C14orf144	Q96I85	54 aa		6.57	□□□□□ -1.36
SPIDR-223	ENST00000524033	FAM210B	Q96KR6	192 aa		6.57	□□□□□ -1.36
SPIDR-223	ENST00000524033	PFDN5	Q99471	154 aa		6.57	□□□□□ -1.36
SPIDR-223	ENST00000524033	SSX3	Q99909	188 aa		6.57	□□□□□ -1.36
SPIDR-223	ENST00000524033	GPR61	Q9BZJ8	451 aa		6.57	□□□□□ -1.36
SPIDR-223	ENST00000524033	RIMS4	Q9H426	269 aa	Predicted RBP	6.57	□□□□□ -1.36
SPIDR-223	ENST00000524033	ZNF665	Q9H7R5	613 aa		6.57	□□□□□ -1.36
SPIDR-223	ENST00000524033	SRD5A3	Q9H8P0	318 aa		6.57	□□□□□ -1.36
SPIDR-223	ENST00000524033	RPRM	Q9NS64	109 aa		6.57	□□□□□ -1.36
SPIDR-223	ENST00000524033	B4GALT7	Q9UBV7	327 aa		6.57	□□□□□ -1.36
SPIDR-223	ENST00000524033		Q9UFV3	132 aa		6.57	□□□□□ -1.36
SPIDR-223	ENST00000524033	OR14J1	Q9UGF5	321 aa		6.57	□□□□□ -1.36
SPIDR-223	ENST00000524033	RNF150	Q9ULK6	438 aa		6.57	□□□□□ -1.36
SPIDR-223	ENST00000524033	TIMM9	Q9Y5J7	89 aa		6.57	□□□□□ -1.36
SPIDR-223	ENST00000524033	FAM215A	Q9Y5M1	114 aa		6.57	□□□□□ -1.36
SPIDR-223	ENST00000524033	SETD2	Q9BYW2	2564 aa	Predicted RBP	6.57	□□□□□ -1.36
SPIDR-223	ENST00000524033	DOCK10	Q96BY6	2186 aa		6.57	□□□□□ -1.36
SPIDR-223	ENST00000524033	LRP5L	A4QPB2	252 aa		6.56	□□□□□ -1.36
SPIDR-223	ENST00000524033	DVL1	O14640	695 aa		6.56	□□□□□ -1.36
SPIDR-223	ENST00000524033	CYB5B	O43169	146 aa		6.56	□□□□□ -1.36
SPIDR-223	ENST00000524033	TRAPPC6A	O75865	159 aa		6.56	□□□□□ -1.36
SPIDR-223	ENST00000524033	IFNA5	P01569	189 aa		6.56	□□□□□ -1.36
SPIDR-223	ENST00000524033	IGKV1-5	P01602	117 aa		6.56	□□□□□ -1.36
SPIDR-223	ENST00000524033	THBD	P07204	575 aa		6.56	□□□□□ -1.36
SPIDR-223	ENST00000524033	GDF1	P27539	372 aa		6.56	□□□□□ -1.36
SPIDR-223	ENST00000524033	MDH2	P40926	338 aa	Known RBP	6.56	□□□□□ -1.36
SPIDR-223	ENST00000524033	GFRA1	P56159	465 aa		6.56	□□□□□ -1.36
SPIDR-223	ENST00000524033	SERF2	P84101	59 aa		6.56	□□□□□ -1.36
SPIDR-223	ENST00000524033	TMEM267	Q0VDI3	215 aa	Predicted RBP	6.56	□□□□□ -1.36
SPIDR-223	ENST00000524033	GAMT	Q14353	236 aa		6.56	□□□□□ -1.36
SPIDR-223	ENST00000524033	CEACAM21	Q3KPI0	293 aa		6.56	□□□□□ -1.36
SPIDR-223	ENST00000524033	TMEM41B	Q5BJD5	291 aa		6.56	□□□□□ -1.36
SPIDR-223	ENST00000524033	SPIN3	Q5JUX0	258 aa		6.56	□□□□□ -1.36
SPIDR-223	ENST00000524033	C1orf185	Q5T7R7	199 aa		6.56	□□□□□ -1.36
SPIDR-223	ENST00000524033	OR2T2	Q6IF00	324 aa		6.56	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms