RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 USMG5Q96IX5 58 aa17.19■□□□□ 0.34
PVT1-218ENST00000523328 NEURL2Q9BR09 285 aa17.19■□□□□ 0.34
PVT1-218ENST00000523328 HDHD3Q9BSH5 251 aaPredicted RBP17.19■□□□□ 0.34
PVT1-218ENST00000523328 KCNK15Q9H427 330 aa17.19■□□□□ 0.34
PVT1-218ENST00000523328 A0A0A6YYD4 124 aa17.18■□□□□ 0.34
PVT1-218ENST00000523328 APOA2P02652 100 aa17.18■□□□□ 0.34
PVT1-218ENST00000523328 C1orf100Q5SVJ3 147 aa17.18■□□□□ 0.34
PVT1-218ENST00000523328 RNLSQ5VYX0 342 aa17.18■□□□□ 0.34
PVT1-218ENST00000523328 RIMS4Q9H426 269 aaPredicted RBP17.18■□□□□ 0.34
PVT1-218ENST00000523328 PLEKHJ1Q9NW61 149 aa17.18■□□□□ 0.34
PVT1-218ENST00000523328 ZNF221Q9UK13 617 aa17.18■□□□□ 0.34
PVT1-218ENST00000523328 TPPPO94811 219 aa17.17■□□□□ 0.34
PVT1-218ENST00000523328 CD7P09564 240 aa17.17■□□□□ 0.34
PVT1-218ENST00000523328 SCTP09683 121 aa17.17■□□□□ 0.34
PVT1-218ENST00000523328 MAPK3P27361 379 aaPredicted RBP17.17■□□□□ 0.34
PVT1-218ENST00000523328 INSL4Q14641 139 aa17.17■□□□□ 0.34
PVT1-218ENST00000523328 CD300EQ496F6 205 aaPredicted RBP17.17■□□□□ 0.34
PVT1-218ENST00000523328 LAX1Q8IWV1 398 aa17.17■□□□□ 0.34
PVT1-218ENST00000523328 DEFB125Q8N687 156 aa17.17■□□□□ 0.34
PVT1-218ENST00000523328 KCNG3Q8TAE7 436 aa17.17■□□□□ 0.34
PVT1-218ENST00000523328 THRSPQ92748 146 aa17.17■□□□□ 0.34
PVT1-218ENST00000523328 GGHQ92820 318 aa17.17■□□□□ 0.34
PVT1-218ENST00000523328 SLC35D1Q9NTN3 355 aa17.17■□□□□ 0.34
PVT1-218ENST00000523328 SMPD3Q9NY59 655 aaPredicted RBP17.17■□□□□ 0.34
PVT1-218ENST00000523328 COA4Q9NYJ1 87 aa17.17■□□□□ 0.34
PVT1-218ENST00000523328 AK3Q9UIJ7 227 aa17.17■□□□□ 0.34
PVT1-218ENST00000523328 ZNF785A8K8V0 405 aa17.16■□□□□ 0.34
PVT1-218ENST00000523328 TMEM14DPA8MWL7 114 aa17.16■□□□□ 0.34
PVT1-218ENST00000523328 LGALS7P47929 136 aa17.16■□□□□ 0.34
PVT1-218ENST00000523328 QRFPP83859 136 aa17.16■□□□□ 0.34
PVT1-218ENST00000523328 ST3GAL4Q11206 333 aa17.16■□□□□ 0.34
PVT1-218ENST00000523328 MRGPRG-AS1Q2M3A8 158 aa17.16■□□□□ 0.34
PVT1-218ENST00000523328 LRRTM1Q86UE6 522 aa17.16■□□□□ 0.34
PVT1-218ENST00000523328 LINC00476Q8WZB0 136 aa17.16■□□□□ 0.34
PVT1-218ENST00000523328 SNAPC3Q92966 411 aa17.16■□□□□ 0.34
PVT1-218ENST00000523328 WFDC10AQ9H1F0 79 aa17.16■□□□□ 0.34
PVT1-218ENST00000523328 FAM53CQ9NYF3 392 aa17.16■□□□□ 0.34
PVT1-218ENST00000523328 PEMTQ9UBM1 199 aa17.16■□□□□ 0.34
PVT1-218ENST00000523328 IGKV1-6A0A0C4DH72 117 aa17.15■□□□□ 0.34
PVT1-218ENST00000523328 EFCAB10A6NFE3 127 aa17.15■□□□□ 0.34
PVT1-218ENST00000523328 M0R1X1 148 aa17.15■□□□□ 0.34
PVT1-218ENST00000523328 GLT8D1Q68CQ7 371 aa17.15■□□□□ 0.34
PVT1-218ENST00000523328 PQLC1Q8N2U9 271 aa17.15■□□□□ 0.34
PVT1-218ENST00000523328 Q9N2K0 584 aa17.15■□□□□ 0.34
PVT1-218ENST00000523328 SLC2A8Q9NY64 477 aa17.15■□□□□ 0.34
PVT1-218ENST00000523328 MGAT4AQ9UM21 535 aa17.15■□□□□ 0.34
PVT1-218ENST00000523328 BMPR1BO00238 502 aa17.14■□□□□ 0.33
PVT1-218ENST00000523328 AIREO43918 545 aa17.14■□□□□ 0.33
PVT1-218ENST00000523328 APELAP0DMC3 54 aa17.14■□□□□ 0.33
PVT1-218ENST00000523328 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.14■□□□□ 0.33
PVT1-218ENST00000523328 ADAD2Q8NCV1 583 aaKnown RBP17.14■□□□□ 0.33
PVT1-218ENST00000523328 LPAR5Q9H1C0 372 aa17.14■□□□□ 0.33
PVT1-218ENST00000523328 SRD5A3Q9H8P0 318 aa17.14■□□□□ 0.33
PVT1-218ENST00000523328 SRRM4A7MD48 611 aaKnown RBP17.13■□□□□ 0.33
PVT1-218ENST00000523328 SOCS1O15524 211 aa17.13■□□□□ 0.33
PVT1-218ENST00000523328 CD37P11049 281 aa17.13■□□□□ 0.33
PVT1-218ENST00000523328 WNT4P56705 351 aa17.13■□□□□ 0.33
PVT1-218ENST00000523328 HARBI1Q96MB7 349 aa17.13■□□□□ 0.33
PVT1-218ENST00000523328 S100A14Q9HCY8 104 aa17.13■□□□□ 0.33
PVT1-218ENST00000523328 RDH8Q9NYR8 311 aa17.13■□□□□ 0.33
PVT1-218ENST00000523328 A0A0B4J203 849 aa17.12■□□□□ 0.33
PVT1-218ENST00000523328 OR11H12B2RN74 326 aa17.12■□□□□ 0.33
PVT1-218ENST00000523328 ACSM3Q53FZ2 586 aa17.12■□□□□ 0.33
PVT1-218ENST00000523328 PHYHIPQ92561 330 aa17.12■□□□□ 0.33
PVT1-218ENST00000523328 ZNF230Q9UIE0 474 aaPredicted RBP17.12■□□□□ 0.33
PVT1-218ENST00000523328 MSGN1A6NI15 193 aa17.11■□□□□ 0.33
PVT1-218ENST00000523328 FOXI3A8MTJ6 420 aaPredicted RBP17.11■□□□□ 0.33
PVT1-218ENST00000523328 SRMP19623 302 aa17.11■□□□□ 0.33
PVT1-218ENST00000523328 DEFB114Q30KQ6 69 aa17.11■□□□□ 0.33
PVT1-218ENST00000523328 TMEM177Q53S58 311 aa17.11■□□□□ 0.33
PVT1-218ENST00000523328 RBM48Q5RL73 367 aaKnown RBP17.11■□□□□ 0.33
PVT1-218ENST00000523328 FAM89BQ8N5H3 189 aa17.11■□□□□ 0.33
PVT1-218ENST00000523328 PHB2Q99623 299 aa17.11■□□□□ 0.33
PVT1-218ENST00000523328 AKIP1Q9NQ31 210 aa17.11■□□□□ 0.33
PVT1-218ENST00000523328 C12orf4Q9NQ89 552 aa17.11■□□□□ 0.33
PVT1-218ENST00000523328 ZC4H2Q9NQZ6 224 aa17.11■□□□□ 0.33
PVT1-218ENST00000523328 HSF4Q9ULV5 492 aa17.11■□□□□ 0.33
PVT1-218ENST00000523328 MYL12BO14950 172 aa17.1■□□□□ 0.33
PVT1-218ENST00000523328 BPNT1O95861 308 aa17.1■□□□□ 0.33
PVT1-218ENST00000523328 OR9G9P0C7N8 305 aa17.1■□□□□ 0.33
PVT1-218ENST00000523328 TMEM50BP56557 158 aa17.1■□□□□ 0.33
PVT1-218ENST00000523328 RHOGP84095 191 aa17.1■□□□□ 0.33
PVT1-218ENST00000523328 TTC23Q5W5X9 447 aa17.1■□□□□ 0.33
PVT1-218ENST00000523328 C10orf67Q8IYJ2 551 aa17.1■□□□□ 0.33
PVT1-218ENST00000523328 C5orf30Q96GV9 206 aa17.1■□□□□ 0.33
PVT1-218ENST00000523328 SDHAF2Q9NX18 166 aa17.1■□□□□ 0.33
PVT1-218ENST00000523328 TRBV9A0A0B4J1U6 114 aa17.09■□□□□ 0.33
PVT1-218ENST00000523328 SHOXO15266 292 aa17.09■□□□□ 0.33
PVT1-218ENST00000523328 EDN2P20800 178 aa17.09■□□□□ 0.33
PVT1-218ENST00000523328 ZNF45Q02386 682 aa17.09■□□□□ 0.33
PVT1-218ENST00000523328 EXOSC2Q13868 293 aaKnown RBP17.09■□□□□ 0.33
PVT1-218ENST00000523328 LAIR2Q6ISS4 152 aa17.09■□□□□ 0.33
PVT1-218ENST00000523328 NANOGP1Q8N7R0 232 aa17.09■□□□□ 0.33
PVT1-218ENST00000523328 DYNLRB2Q8TF09 96 aa17.09■□□□□ 0.33
PVT1-218ENST00000523328 CYGBQ8WWM9 190 aa17.09■□□□□ 0.33
PVT1-218ENST00000523328 OR2D2Q9H210 308 aa17.09■□□□□ 0.33
PVT1-218ENST00000523328 HERC2O95714 4834 aa17.09■□□□□ 0.33
PVT1-218ENST00000523328 KMT2AQ03164 3969 aa17.08■□□□□ 0.32
PVT1-218ENST00000523328 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.08■□□□□ 0.32
PVT1-218ENST00000523328 FAM223BA6NKX1 122 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 336.1 ms